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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: peroxisome, cytosol, plasma membrane

Predictor Summary:
  • cytosol 2
  • mitochondrion 1
  • plasma membrane 1
  • peroxisome 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol, peroxisome, plasma membrane
Any Predictor:cytosol, peroxisome, plasma membrane
BaCelLo:cytosol
MultiLoc:cytosol
PProwler:mitochondrion
WoLF PSORT:plasma membrane
YLoc:peroxisome
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra004030.1-P Field mustard cytosol, peroxisome, plasma membrane 98.83 98.83
CDY04237 Canola cytosol, peroxisome, plasma membrane 92.11 92.27
CDY69402 Canola plasma membrane 44.97 89.93
CDY65728 Canola cytosol 29.87 89.45
CDY38595 Canola cytosol, peroxisome, plasma membrane 88.25 88.85
AT1G68570.1 Thale cress cytosol, peroxisome, plasma membrane 87.75 87.75
CDY54537 Canola cytosol, peroxisome, plasma membrane 86.91 83.82
KRH75378 Soybean plasma membrane 70.81 73.26
KRH75379 Soybean plasma membrane 56.54 70.21
VIT_01s0011g03400.t01 Wine grape plasma membrane 67.11 68.61
Solyc05g009500.2.1 Tomato plasma membrane 65.94 68.59
PGSC0003DMT400037693 Potato plasma membrane 66.11 67.93
GSMUA_Achr5P24480_001 Banana plasma membrane 63.93 65.24
CDX96007 Canola cytosol, peroxisome, plasma membrane 71.31 61.42
EER88193 Sorghum cytosol, golgi, peroxisome 58.22 58.32
Zm00001d045667_P001 Maize cytosol, nucleus, peroxisome 58.05 58.25
Os06t0264500-01 Rice extracellular 57.89 57.79
TraesCS7A01G206400.1 Wheat cytosol, nucleus, peroxisome 59.4 57.28
TraesCS7B01G113600.2 Wheat cytosol, nucleus, peroxisome 58.56 56.93
TraesCS7D01G209200.1 Wheat cytosol, nucleus, peroxisome 58.72 56.63
HORVU7Hr1G042120.1 Barley cytosol 58.56 56.56
CDY20187 Canola plasma membrane 19.97 40.48
CDY69519 Canola plasma membrane 19.8 40.41
CDY69522 Canola plasma membrane 19.8 40.41
CDY56086 Canola cytosol, peroxisome, plasma membrane 37.58 37.9
CDY09846 Canola plasma membrane 27.18 37.76
CDY26715 Canola plasma membrane 36.74 37.76
CDY25813 Canola cytosol, peroxisome, plasma membrane 35.91 37.68
CDX97728 Canola plasma membrane 37.42 37.61
CDY40280 Canola plasma membrane 35.74 37.5
CDY53067 Canola cytosol, peroxisome, plasma membrane 37.25 37.37
CDY30141 Canola plasma membrane 36.91 37.1
CDX81902 Canola cytosol, peroxisome, plasma membrane 36.74 36.99
CDY28441 Canola cytosol, peroxisome, plasma membrane 35.23 36.97
CDY70561 Canola plasma membrane 33.72 36.95
CDY21692 Canola plasma membrane 35.57 36.93
CDX83801 Canola cytosol, peroxisome, plasma membrane 36.41 36.72
CDY23545 Canola cytosol, peroxisome, plasma membrane 36.91 36.24
CDY48389 Canola cytosol, peroxisome, plasma membrane 36.91 36.24
CDY28371 Canola plasma membrane 29.53 36.21
CDY11647 Canola plastid 37.42 36.03
CDY38767 Canola plastid 37.42 35.85
CDY51257 Canola plastid 29.03 35.6
CDX86030 Canola plasma membrane 16.11 35.29
CDY52480 Canola plasma membrane 26.85 34.71
CDX96690 Canola plasma membrane 35.23 34.6
CDY45756 Canola plasma membrane 32.89 34.33
CDY16763 Canola peroxisome 32.72 33.97
CDY52504 Canola plasma membrane 32.55 33.92
CDY05592 Canola plasma membrane 32.55 33.92
CDX87266 Canola peroxisome 32.55 33.86
CDY11648 Canola plasma membrane 31.21 33.76
CDY36913 Canola cytosol, peroxisome, plasma membrane 34.73 33.66
CDY30731 Canola plasma membrane 33.72 33.56
CDY45754 Canola plasma membrane 33.89 33.55
CDY00315 Canola plasma membrane 34.4 33.5
CDY38766 Canola plasma membrane 30.87 33.39
CDX86198 Canola peroxisome 31.88 33.39
CDX84344 Canola plasma membrane 33.72 33.39
CDY51783 Canola cytosol, peroxisome, plasma membrane 33.72 33.33
CDX68450 Canola cytosol, peroxisome, plasma membrane 34.4 33.33
CDX99152 Canola plasma membrane 31.04 33.21
CDX83027 Canola cytosol, peroxisome, plasma membrane 33.05 32.72
CDY12696 Canola plasma membrane 28.36 32.69
CDY18499 Canola plasma membrane 30.37 32.5
CDX81495 Canola plasma membrane 28.02 32.18
CDY69433 Canola golgi, peroxisome, plastid 34.06 32.02
CDY21805 Canola cytosol, peroxisome, plasma membrane 33.22 31.88
CDY48147 Canola plasma membrane 29.36 31.76
CDY67993 Canola plasma membrane 29.36 31.47
CDX91207 Canola cytosol, endoplasmic reticulum, plasma membrane 18.29 31.32
CDX99151 Canola plasma membrane 28.69 30.81
CDY16764 Canola cytosol, mitochondrion, plasma membrane, plastid 29.19 29.34
CDX86031 Canola plasma membrane 7.55 29.03
CDX69747 Canola plasma membrane 30.37 11.71
CDY68532 Canola cytosol 0.67 0.75
Protein Annotations
MapMan:11.6.4.1MapMan:24.2.2.9GO:A0A078F2R4UniProt:A0A078F2R4EnsemblPlants:CDY07377ProteinID:CDY07377
ProteinID:CDY07377.1GO:GO:0003674GO:GO:0005215GO:GO:0005575GO:GO:0006810GO:GO:0008150
GO:GO:0016020GO:GO:0016021GO:GO:0022857GO:GO:0055085EnsemblPlantsGene:GSBRNA2T00124351001InterPro:MFS_trans_sf
PFAM:PF00854InterPro:POT_famPANTHER:PTHR11654PANTHER:PTHR11654:SF178SUPFAM:SSF103473TMHMM:TMhelix
UniParc:UPI0004EE5961SEG:seg::::
Description
BnaA07g24560DBnaA07g24560D protein [Source:UniProtKB/TrEMBL;Acc:A0A078F2R4]
Coordinates
chrLK031978:-:294232..298159
Molecular Weight (calculated)
66472.5 Da
IEP (calculated)
9.122
GRAVY (calculated)
0.265
Length
596 amino acids
Sequence
(BLAST)
001: MEEQSKNKIS EEEKQLHGKP SRRKGGLITM PFIFANEMCE KMAVVGFHSN MISYLTTQLH LPLTKAANTL TNFAGTSSLT PLVGAFIADS FAGRFWTITF
101: ASIIYQIGMT LLTISAIIPT LRPPPCKGEE VCVVADTAQL SVLYIALLLG AIGSGGIRPC VVAFGADQFD ESDPEQTTKP WNYFNWFYFI MGAAVLVAVT
201: VLVYIQDNVG WGVGLGIPTL AMFLSVIAFV GGFRLYRHLH PSGSPFTRLI QVAVAAFHKR KLSMVSDHTL LYFNDEIDAT ISLDGILTHT KHMSFLDKAA
301: IKTEEDNLKS GQIPNLWRLS TVHRVEELKS VIRMGPIGAS GILLFTAYAQ QGTFSLQQAK TMNRHLTKSF QIPAGSMSVF TTVAMLCTVV FYDRIFVKIA
401: RKFTGLERGI TFLHRMGIGF VISLIATLIA GFVEIERKQV ALEHGLLDKP HTVIPISFMW LIPQYSLHGI AEAFMSIGSL EFFYDQAPES MRSTSMALFW
501: MSISIGNYAS TLLVTLVHTF SAKPDGSNWL PDKNLNQGRL EYFYWLITLL QAINFVYYLW CAKIYTYKPV QVHHSKKVNS PVSGELRLFK KNLIDA
Best Arabidopsis Sequence Match ( AT1G68570.1 )
(BLAST)
001: MEEQSKNKIS EEEKQLHGRP NRPKGGLITM PFIFANEICE KLAVVGFHAN MISYLTTQLH LPLTKAANTL TNFAGTSSLT PLLGAFIADS FAGRFWTITF
101: ASIIYQIGMT LLTISAIIPT LRPPPCKGEE VCVVADTAQL SILYVALLLG ALGSGGIRPC VVAFGADQFD ESDPNQTTKT WNYFNWYYFC MGAAVLLAVT
201: VLVWIQDNVG WGLGLGIPTV AMFLSVIAFV GGFQLYRHLV PAGSPFTRLI QVGVAAFRKR KLRMVSDPSL LYFNDEIDAP ISLGGKLTHT KHMSFLDKAA
301: IVTEEDNLKP GQIPNHWRLS TVHRVEELKS VIRMGPIGAS GILLITAYAQ QGTFSLQQAK TMNRHLTNSF QIPAGSMSVF TTVAMLTTII FYDRVFVKVA
401: RKFTGLERGI TFLHRMGIGF VISIIATLVA GFVEVKRKSV AIEHGLLDKP HTIVPISFLW LIPQYGLHGV AEAFMSIGHL EFFYDQAPES MRSTATALFW
501: MAISIGNYVS TLLVTLVHKF SAKPDGSNWL PDNNLNRGRL EYFYWLITVL QAVNLVYYLW CAKIYTYKPV QVHHSKEDSS PVKEELQLSN RSLVDE
Arabidopsis Description
NPF3.1Protein NRT1/ PTR FAMILY 3.1 [Source:UniProtKB/Swiss-Prot;Acc:Q9SX20]
SUBAcon: [peroxisome,cytosol,plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.