Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum, cytosol, plasma membrane
Predictor Summary:
Predictor Summary:
- nucleus 1
- endoplasmic reticulum 2
- extracellular 1
- vacuole 1
- plasma membrane 2
- golgi 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY67993 | Canola | plasma membrane | 80.75 | 50.54 |
| AT5G11570.1 | Thale cress | plasma membrane | 61.78 | 44.7 |
| KRH62051 | Soybean | plasma membrane | 46.84 | 28.7 |
| PGSC0003DMT400075590 | Potato | plasma membrane | 45.11 | 27.26 |
| CDY28371 | Canola | plasma membrane | 36.49 | 26.13 |
| CDY70561 | Canola | plasma membrane | 39.66 | 25.37 |
| CDY51257 | Canola | plastid | 35.06 | 25.1 |
| CDY30141 | Canola | plasma membrane | 42.53 | 24.96 |
| CDX97728 | Canola | plasma membrane | 42.53 | 24.96 |
| Solyc12g095810.1.1 | Tomato | plasma membrane | 44.54 | 23.59 |
| CDX86031 | Canola | plasma membrane | 10.34 | 23.23 |
| CDY53067 | Canola | cytosol, peroxisome, plasma membrane | 36.21 | 21.21 |
| CDY56086 | Canola | cytosol, peroxisome, plasma membrane | 35.92 | 21.15 |
| CDY23545 | Canola | cytosol, peroxisome, plasma membrane | 36.49 | 20.92 |
| CDY48389 | Canola | cytosol, peroxisome, plasma membrane | 36.21 | 20.76 |
| CDY28441 | Canola | cytosol, peroxisome, plasma membrane | 33.62 | 20.6 |
| CDY40280 | Canola | plasma membrane | 33.62 | 20.6 |
| CDY38767 | Canola | plastid | 36.49 | 20.42 |
| CDY11647 | Canola | plastid | 36.21 | 20.36 |
| CDY25813 | Canola | cytosol, peroxisome, plasma membrane | 33.05 | 20.25 |
| CDY45756 | Canola | plasma membrane | 32.47 | 19.79 |
| CDY11648 | Canola | plasma membrane | 31.03 | 19.6 |
| CDY38766 | Canola | plasma membrane | 30.75 | 19.42 |
| CDY38595 | Canola | cytosol, peroxisome, plasma membrane | 32.76 | 19.26 |
| CDY20187 | Canola | plasma membrane | 16.09 | 19.05 |
| CDY45754 | Canola | plasma membrane | 32.76 | 18.94 |
| CDX84344 | Canola | plasma membrane | 32.76 | 18.94 |
| CDY18499 | Canola | plasma membrane | 30.17 | 18.85 |
| CDY69522 | Canola | plasma membrane | 15.8 | 18.84 |
| CDY69519 | Canola | plasma membrane | 15.8 | 18.84 |
| CDY16763 | Canola | peroxisome | 31.03 | 18.82 |
| CDY30731 | Canola | plasma membrane | 32.18 | 18.7 |
| CDX87266 | Canola | peroxisome | 30.75 | 18.67 |
| CDY00315 | Canola | plasma membrane | 32.76 | 18.63 |
| CDX99151 | Canola | plasma membrane | 29.31 | 18.38 |
| CDY04237 | Canola | cytosol, peroxisome, plasma membrane | 31.32 | 18.32 |
| CDY07377 | Canola | cytosol, peroxisome, plasma membrane | 31.32 | 18.29 |
| CDX69747 | Canola | plasma membrane | 81.03 | 18.24 |
| CDY52504 | Canola | plasma membrane | 29.89 | 18.18 |
| CDY05592 | Canola | plasma membrane | 29.89 | 18.18 |
| CDY48147 | Canola | plasma membrane | 28.74 | 18.15 |
| CDX83027 | Canola | cytosol, peroxisome, plasma membrane | 31.32 | 18.11 |
| CDX99152 | Canola | plasma membrane | 28.74 | 17.95 |
| CDY21692 | Canola | plasma membrane | 29.6 | 17.94 |
| CDX68450 | Canola | cytosol, peroxisome, plasma membrane | 31.61 | 17.89 |
| CDY36913 | Canola | cytosol, peroxisome, plasma membrane | 31.61 | 17.89 |
| CDY54537 | Canola | cytosol, peroxisome, plasma membrane | 31.61 | 17.8 |
| CDY51783 | Canola | cytosol, peroxisome, plasma membrane | 30.75 | 17.74 |
| CDX81902 | Canola | cytosol, peroxisome, plasma membrane | 30.17 | 17.74 |
| CDX83801 | Canola | cytosol, peroxisome, plasma membrane | 29.31 | 17.26 |
| CDY21805 | Canola | cytosol, peroxisome, plasma membrane | 30.75 | 17.23 |
| CDX86198 | Canola | peroxisome | 28.16 | 17.22 |
| CDX81495 | Canola | plasma membrane | 25.57 | 17.15 |
| CDY26715 | Canola | plasma membrane | 28.45 | 17.07 |
| CDY69433 | Canola | golgi, peroxisome, plastid | 31.03 | 17.03 |
| CDY12696 | Canola | plasma membrane | 25.29 | 17.02 |
| CDX96690 | Canola | plasma membrane | 29.6 | 16.97 |
| CDY52480 | Canola | plasma membrane | 22.13 | 16.7 |
| CDY16764 | Canola | cytosol, mitochondrion, plasma membrane, plastid | 28.45 | 16.69 |
| CDY09846 | Canola | plasma membrane | 18.39 | 14.92 |
| CDY69402 | Canola | plasma membrane | 12.64 | 14.77 |
| CDX96007 | Canola | cytosol, peroxisome, plasma membrane | 27.59 | 13.87 |
| CDX86030 | Canola | plasma membrane | 10.34 | 13.24 |
| CDY65728 | Canola | cytosol | 7.47 | 13.07 |
| CDY68532 | Canola | cytosol | 1.44 | 0.93 |
Protein Annotations
| Gene3D:1.20.1250.20 | MapMan:24.2.2.9 | GO:A0A078DQK4 | EnsemblPlants:CDX91207 | ProteinID:CDX91207 | ProteinID:CDX91207.1 |
| GO:GO:0003674 | GO:GO:0005215 | GO:GO:0005575 | GO:GO:0006810 | GO:GO:0008150 | GO:GO:0016020 |
| GO:GO:0022857 | GO:GO:0055085 | EnsemblPlantsGene:GSBRNA2T00152022001 | InterPro:MFS_trans_sf | PFAM:PF00854 | InterPro:POT_fam |
| PANTHER:PTHR11654 | PANTHER:PTHR11654:SF197 | SUPFAM:SSF103473 | TMHMM:TMhelix | UniParc:UPI0004EDF6DD | SEG:seg |
Description
BnaC02g03900D
Coordinates
chrLK031865:+:1387836..1390633
Molecular Weight (calculated)
38373.7 Da
IEP (calculated)
6.510
GRAVY (calculated)
0.459
Length
348 amino acids
Sequence
(BLAST)
(BLAST)
001: MILNLTGEYD MATTEAAKII LLWSAATNFF PLVGAFVADS YTGRFPLIGF GSSTSLLSFL VFIQTKYGWQ IGFGVSVVAM ALSVLVAAFR NRHVDLSSEE
101: HIISYYHETG SSCSIPSQKL RYLNKACATS DPKRDLTLEG KSQSPWKLFV TASQASFIVL QASAMDRRTF IQGFEIPSGS YSVFMITSFV LFLVIYELVV
201: VPLVSWIIRK PFLLGVMVRM GVGIKRARDE GGTMLSAMWL SPYMILGGIS EAFLAIAQNE FLYSELPKSM SSVATTLSGL GLAASSIVSS WIITVVDIAT
301: CRSWITEDID EGHLDYYYWL VAALSLLNVL YFVWCSKGYG KCKSDADN
101: HIISYYHETG SSCSIPSQKL RYLNKACATS DPKRDLTLEG KSQSPWKLFV TASQASFIVL QASAMDRRTF IQGFEIPSGS YSVFMITSFV LFLVIYELVV
201: VPLVSWIIRK PFLLGVMVRM GVGIKRARDE GGTMLSAMWL SPYMILGGIS EAFLAIAQNE FLYSELPKSM SSVATTLSGL GLAASSIVSS WIITVVDIAT
301: CRSWITEDID EGHLDYYYWL VAALSLLNVL YFVWCSKGYG KCKSDADN
001: MDQEALLVGR TLLKRGIPTI PFILASQALE KLAYFGLVPN MILFLTVEYG MGTAEAANIL FLWSAATNFF PLVGAFIADS YTGRFPLIGF GSSISLTGMV
101: LLWLTTIIRP ECDKLTNVCQ PTTLLKSVLL YSFFALTAIG AGGVRSSCLA FAADQLQPNQ TSRVTTSSLE TLFNWYYFSV MVACFLSQSL LVFVQTTYGW
201: QIGFGVSVAA MALSVALFFA ASPYYVRFQK PTRNSRNPWK LCRVQQVEDL KSLINVIPIW STGIILSLVT ACQVSFIVLQ AKTMDRHTFI QGFEIPPGSY
301: GIFLVISFLL FLGLYDLVIV PLLSWALREP FRLGVMVRMW AGYVISVLCI SALAATEYAR RKTARDESGT KLSAMWLLPY MILGGIAEAL NTIAQNEFFY
401: SELPKTMSSV ATTLSSLNMA AASLISSWII TIVDVTTYGS WITENIDEGH LDYYYWLLVG LSLLNVLYFV WCKKSYGKCS I
101: LLWLTTIIRP ECDKLTNVCQ PTTLLKSVLL YSFFALTAIG AGGVRSSCLA FAADQLQPNQ TSRVTTSSLE TLFNWYYFSV MVACFLSQSL LVFVQTTYGW
201: QIGFGVSVAA MALSVALFFA ASPYYVRFQK PTRNSRNPWK LCRVQQVEDL KSLINVIPIW STGIILSLVT ACQVSFIVLQ AKTMDRHTFI QGFEIPPGSY
301: GIFLVISFLL FLGLYDLVIV PLLSWALREP FRLGVMVRMW AGYVISVLCI SALAATEYAR RKTARDESGT KLSAMWLLPY MILGGIAEAL NTIAQNEFFY
401: SELPKTMSSV ATTLSSLNMA AASLISSWII TIVDVTTYGS WITENIDEGH LDYYYWLLVG LSLLNVLYFV WCKKSYGKCS I
Arabidopsis Description
NPF1.3Protein NRT1/ PTR FAMILY 1.3 [Source:UniProtKB/Swiss-Prot;Acc:Q9LYD5]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.