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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 1
  • cytosol 2
  • mitochondrion 1
  • plasma membrane 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, nucleus, plasma membrane
BaCelLo:nucleus
MultiLoc:cytosol
PProwler:mitochondrion
WoLF PSORT:cytosol
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY69402 Canola plasma membrane 88.94 59.4
CDY38595 Canola cytosol, peroxisome, plasma membrane 95.98 32.26
AT1G68570.1 Thale cress cytosol, peroxisome, plasma membrane 91.96 30.7
CDY07377 Canola cytosol, peroxisome, plasma membrane 89.45 29.87
CDY54537 Canola cytosol, peroxisome, plasma membrane 90.45 29.13
CDY04237 Canola cytosol, peroxisome, plasma membrane 83.42 27.9
CDY69519 Canola plasma membrane 40.2 27.4
CDY69522 Canola plasma membrane 40.2 27.4
CDY20187 Canola plasma membrane 39.7 26.87
CDX96007 Canola cytosol, peroxisome, plasma membrane 92.46 26.59
KRH75378 Soybean plasma membrane 71.86 24.83
Solyc05g009500.2.1 Tomato plasma membrane 66.83 23.21
PGSC0003DMT400037693 Potato plasma membrane 67.34 23.1
VIT_01s0011g03400.t01 Wine grape plasma membrane 66.83 22.81
GSMUA_Achr5P24480_001 Banana plasma membrane 65.83 22.43
CDX86030 Canola plasma membrane 28.64 20.96
Os06t0264500-01 Rice extracellular 59.8 19.93
EER88193 Sorghum cytosol, golgi, peroxisome 58.29 19.5
Zm00001d045667_P001 Maize cytosol, nucleus, peroxisome 57.29 19.19
HORVU7Hr1G042120.1 Barley cytosol 57.79 18.64
TraesCS7A01G206400.1 Wheat cytosol, nucleus, peroxisome 57.29 18.45
TraesCS7D01G209200.1 Wheat cytosol, nucleus, peroxisome 57.29 18.45
TraesCS7B01G113600.2 Wheat cytosol, nucleus, peroxisome 56.78 18.43
CDY70561 Canola plasma membrane 42.21 15.44
CDY09846 Canola plasma membrane 32.66 15.15
CDX97728 Canola plasma membrane 41.71 14.0
CDY30141 Canola plasma membrane 41.21 13.83
KRH75379 Soybean plasma membrane 32.66 13.54
CDY40280 Canola plasma membrane 38.19 13.38
CDY25813 Canola cytosol, peroxisome, plasma membrane 37.69 13.2
CDY28441 Canola cytosol, peroxisome, plasma membrane 37.19 13.03
CDY05592 Canola plasma membrane 36.18 12.59
CDY52504 Canola plasma membrane 36.18 12.59
CDY11648 Canola plasma membrane 34.67 12.52
CDY38766 Canola plasma membrane 34.17 12.34
CDY21692 Canola plasma membrane 35.18 12.2
CDY26715 Canola plasma membrane 35.18 12.07
CDY56086 Canola cytosol, peroxisome, plasma membrane 35.68 12.01
CDX81902 Canola cytosol, peroxisome, plasma membrane 35.68 11.99
CDY53067 Canola cytosol, peroxisome, plasma membrane 35.68 11.95
CDX86198 Canola peroxisome 34.17 11.95
CDY23545 Canola cytosol, peroxisome, plasma membrane 36.18 11.86
CDX83801 Canola cytosol, peroxisome, plasma membrane 35.18 11.84
CDX81495 Canola plasma membrane 30.65 11.75
CDY48389 Canola cytosol, peroxisome, plasma membrane 35.68 11.7
CDY12696 Canola plasma membrane 30.15 11.61
CDY67993 Canola plasma membrane 32.16 11.51
CDY11647 Canola plastid 35.68 11.47
CDY38767 Canola plastid 35.68 11.41
CDY16763 Canola peroxisome 32.16 11.15
CDY30731 Canola plasma membrane 33.17 11.02
CDX87266 Canola peroxisome 31.66 10.99
CDY45754 Canola plasma membrane 33.17 10.96
CDX84344 Canola plasma membrane 33.17 10.96
CDX96690 Canola plasma membrane 33.17 10.87
CDY00315 Canola plasma membrane 33.17 10.78
CDY51783 Canola cytosol, peroxisome, plasma membrane 32.16 10.61
CDX99152 Canola plasma membrane 29.65 10.59
CDY18499 Canola plasma membrane 29.65 10.59
CDY36913 Canola cytosol, peroxisome, plasma membrane 32.66 10.57
CDY21805 Canola cytosol, peroxisome, plasma membrane 32.66 10.47
CDX83027 Canola cytosol, peroxisome, plasma membrane 31.66 10.47
CDY45756 Canola plasma membrane 29.65 10.33
CDY69433 Canola golgi, peroxisome, plastid 32.66 10.25
CDX68450 Canola cytosol, peroxisome, plasma membrane 31.66 10.24
CDX99151 Canola plasma membrane 26.63 9.55
CDY16764 Canola cytosol, mitochondrion, plasma membrane, plastid 27.14 9.11
CDY48147 Canola plasma membrane 25.13 9.07
CDY51257 Canola plastid 19.1 7.82
CDY28371 Canola plasma membrane 19.1 7.82
CDY52480 Canola plasma membrane 17.59 7.59
CDX91207 Canola cytosol, endoplasmic reticulum, plasma membrane 13.07 7.47
CDX69747 Canola plasma membrane 32.66 4.2
CDX86031 Canola plasma membrane 2.01 2.58
CDY68532 Canola cytosol 0.0 0.0
Protein Annotations
Gene3D:1.20.1250.20MapMan:24.2.2.9GO:A0A078JDN0UniProt:A0A078JDN0EnsemblPlants:CDY65728ProteinID:CDY65728
ProteinID:CDY65728.1GO:GO:0003674GO:GO:0005215GO:GO:0005575GO:GO:0006810GO:GO:0008150
GO:GO:0016020GO:GO:0016021GO:GO:0022857GO:GO:0055085EnsemblPlantsGene:GSBRNA2T00048110001InterPro:MFS_trans_sf
PFAM:PF00854InterPro:POT_famPANTHER:PTHR11654PANTHER:PTHR11654:SF178SUPFAM:SSF103473TMHMM:TMhelix
UniParc:UPI0004EDD0B6SEG:seg::::
Description
BnaAnng20970DBnaAnng20970D protein [Source:UniProtKB/TrEMBL;Acc:A0A078JDN0]
Coordinates
chrLK034922:-:19560..20385
Molecular Weight (calculated)
22017.6 Da
IEP (calculated)
6.761
GRAVY (calculated)
0.173
Length
199 amino acids
Sequence
(BLAST)
001: MEEQSKNKIS EEEKQLHGKR SRPKGGLITM PFIFANEICE KLAVVGFHAN MISYLTTQLH LPLTKAANTL TNFGGTSSLT PLLGAFVADS FAGRFWTITF
101: ASIIYQIGMT LLTISAILPT LRPPPCTGEE VCVVADTAQL SVLYIALLLG ALGSGGIRPC VVAFGADQFD ESDPNQTTKT WNYFNWYLYY IYFSSYLYK
Best Arabidopsis Sequence Match ( AT1G68570.1 )
(BLAST)
001: MEEQSKNKIS EEEKQLHGRP NRPKGGLITM PFIFANEICE KLAVVGFHAN MISYLTTQLH LPLTKAANTL TNFAGTSSLT PLLGAFIADS FAGRFWTITF
101: ASIIYQIGMT LLTISAIIPT LRPPPCKGEE VCVVADTAQL SILYVALLLG ALGSGGIRPC VVAFGADQFD ESDPNQTTKT WNYFNWYYFC MGAAVLLAVT
201: VLVWIQDNVG WGLGLGIPTV AMFLSVIAFV GGFQLYRHLV PAGSPFTRLI QVGVAAFRKR KLRMVSDPSL LYFNDEIDAP ISLGGKLTHT KHMSFLDKAA
301: IVTEEDNLKP GQIPNHWRLS TVHRVEELKS VIRMGPIGAS GILLITAYAQ QGTFSLQQAK TMNRHLTNSF QIPAGSMSVF TTVAMLTTII FYDRVFVKVA
401: RKFTGLERGI TFLHRMGIGF VISIIATLVA GFVEVKRKSV AIEHGLLDKP HTIVPISFLW LIPQYGLHGV AEAFMSIGHL EFFYDQAPES MRSTATALFW
501: MAISIGNYVS TLLVTLVHKF SAKPDGSNWL PDNNLNRGRL EYFYWLITVL QAVNLVYYLW CAKIYTYKPV QVHHSKEDSS PVKEELQLSN RSLVDE
Arabidopsis Description
NPF3.1Protein NRT1/ PTR FAMILY 3.1 [Source:UniProtKB/Swiss-Prot;Acc:Q9SX20]
SUBAcon: [peroxisome,cytosol,plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.