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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • cytosol 1
  • plasma membrane 3
  • extracellular 1
  • endoplasmic reticulum 1
  • vacuole 1
  • golgi 1
  • peroxisome 1
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:cytosol, peroxisome, plasma membrane
BaCelLo:cytosol
MultiLoc:plasma membrane
PProwler:secretory
WoLF PSORT:plasma membrane
YLoc:peroxisome
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY52504 Canola plasma membrane 99.83 99.83
Bra020609.1-P Field mustard plasma membrane 99.65 99.65
CDX86198 Canola peroxisome 88.11 88.58
CDY52480 Canola plasma membrane 70.63 87.64
AT5G28470.2 Thale cress plasma membrane 81.29 82.89
KRH56967 Soybean peroxisome 55.42 53.1
PGSC0003DMT400065200 Potato cytosol, peroxisome, plasma membrane 54.37 52.27
Solyc03g113440.2.1 Tomato plasma membrane 53.85 51.68
CDY20187 Canola plasma membrane 19.41 37.76
CDY56086 Canola cytosol, peroxisome, plasma membrane 38.99 37.73
CDY53067 Canola cytosol, peroxisome, plasma membrane 38.81 37.37
CDY40280 Canola plasma membrane 37.06 37.32
CDY28441 Canola cytosol, peroxisome, plasma membrane 36.89 37.15
CDY25813 Canola cytosol, peroxisome, plasma membrane 36.89 37.15
CDY69522 Canola plasma membrane 18.88 36.99
CDY69519 Canola plasma membrane 18.88 36.99
CDY48389 Canola cytosol, peroxisome, plasma membrane 38.99 36.74
CDY09846 Canola plasma membrane 27.27 36.36
CDY23545 Canola cytosol, peroxisome, plasma membrane 38.46 36.24
CDY11647 Canola plastid 39.16 36.19
CDY65728 Canola cytosol 12.59 36.18
CDY38767 Canola plastid 39.16 36.01
CDY45756 Canola plasma membrane 34.62 34.68
CDY69402 Canola plasma membrane 18.01 34.56
CDX68450 Canola cytosol, peroxisome, plasma membrane 37.06 34.47
CDY26715 Canola plasma membrane 34.79 34.31
CDX87266 Canola peroxisome 34.27 34.21
CDY38766 Canola plasma membrane 32.69 33.94
CDY70561 Canola plasma membrane 32.17 33.82
CDX81902 Canola cytosol, peroxisome, plasma membrane 34.97 33.78
CDY11648 Canola plasma membrane 32.52 33.76
CDX83801 Canola cytosol, peroxisome, plasma membrane 34.79 33.67
CDY36913 Canola cytosol, peroxisome, plasma membrane 36.19 33.66
CDY16763 Canola peroxisome 33.74 33.62
CDY21692 Canola plasma membrane 33.74 33.62
CDY30141 Canola plasma membrane 34.79 33.56
CDX97728 Canola plasma membrane 34.79 33.56
CDY30731 Canola plasma membrane 35.14 33.56
CDY00315 Canola plasma membrane 35.84 33.5
CDX84344 Canola plasma membrane 35.14 33.39
CDY45754 Canola plasma membrane 34.97 33.22
CDX83027 Canola cytosol, peroxisome, plasma membrane 34.97 33.22
CDY51783 Canola cytosol, peroxisome, plasma membrane 34.97 33.17
CDY38595 Canola cytosol, peroxisome, plasma membrane 34.09 32.94
CDY69433 Canola golgi, peroxisome, plastid 36.36 32.81
CDY07377 Canola cytosol, peroxisome, plasma membrane 33.92 32.55
CDY04237 Canola cytosol, peroxisome, plasma membrane 33.74 32.44
CDY21805 Canola cytosol, peroxisome, plasma membrane 35.14 32.37
CDX96690 Canola plasma membrane 34.27 32.29
CDY28371 Canola plasma membrane 26.57 31.28
CDY16764 Canola cytosol, mitochondrion, plasma membrane, plastid 32.17 31.03
CDX86030 Canola plasma membrane 14.69 30.88
CDY51257 Canola plastid 26.05 30.66
CDY54537 Canola cytosol, peroxisome, plasma membrane 33.04 30.58
CDX91207 Canola cytosol, endoplasmic reticulum, plasma membrane 18.18 29.89
CDY67993 Canola plasma membrane 27.8 28.6
CDX99152 Canola plasma membrane 27.62 28.37
CDY18499 Canola plasma membrane 27.45 28.19
CDY12696 Canola plasma membrane 25.35 28.05
CDX99151 Canola plasma membrane 26.75 27.57
CDX81495 Canola plasma membrane 24.83 27.36
CDY48147 Canola plasma membrane 25.17 26.13
CDX96007 Canola cytosol, peroxisome, plasma membrane 30.07 24.86
CDX86031 Canola plasma membrane 6.29 23.23
CDX69747 Canola plasma membrane 28.32 10.48
CDY68532 Canola cytosol 0.0 0.0
Protein Annotations
Gene3D:1.20.1250.20MapMan:24.2.2.9GO:A0A078EX90EnsemblPlants:CDY05592ProteinID:CDY05592ProteinID:CDY05592.1
GO:GO:0003674GO:GO:0005215GO:GO:0005575GO:GO:0006810GO:GO:0008150GO:GO:0016020
GO:GO:0022857GO:GO:0055085EnsemblPlantsGene:GSBRNA2T00120550001InterPro:IPR020846InterPro:MFS_domInterPro:MFS_trans_sf
PFAM:PF00854InterPro:POT_famPANTHER:PTHR11654PANTHER:PTHR11654:SF181SUPFAM:SSF103473TMHMM:TMhelix
UniParc:UPI0004EF27F3SEG:seg::::
Description
BnaC02g39450D
Coordinates
chrLK031963:+:36044..40054
Molecular Weight (calculated)
63302.7 Da
IEP (calculated)
9.307
GRAVY (calculated)
0.293
Length
572 amino acids
Sequence
(BLAST)
001: MDIESSTTLS PHVHQESTNP APDMKHRGGW RAIKYIIANE SFEKLASMSL IGNLSVYLTT KYNLGGVFLV NIINIWSGSC NFLSIPGAFV SDAYLGRFWT
101: LLLGSISSFL GMGIIALTAA LPRLRPEACK DPTNCSNPPE RWQLAVLFAG LGLLAIGSGG IRPCNIAFGA DQFDTDTKKG KSQLETFFNW WYFSFTVALV
201: IALTGVVYIQ TNISWVIGFV IPTACLALSV TTFLIGKHTY ICAEPKGSVF ADIVKVVAAA CKKRKVKSGE GVTFYLGPSS DGSSATLVQD RQRLRFVEKA
301: AVITDPNELN EEGKAKNNWR LCSVEQVKNL KCVTGILPVW VTGIACFMLT DQQNIYGILQ AIQMEKTFGH NFQVPAGWMN LVSMITLAVW ISLYECVILP
401: IARQITGRKQ RLNMKQRIQI GIVMGIACML VAGFLEKARR EAALKKGSFV SPVSIVMLLP QFMLAGLTEA FSAVALMEFL TVKMPEHMRA VAGAIFFLSS
501: SIASYICTLL INVIDSVTRK EGRSWLGDKD LNKNRLEYYF FIIGGVQVLN LLYFRFFASR FVTENNKDNR DF
Best Arabidopsis Sequence Match ( AT5G28470.2 )
(BLAST)
001: MDVESSSPSS HALIKKEKGG WRAIKYIIAN ESFEKLASMS LIGNLSVYLM TKYNLGGVFL VNVINIWFGS CNILTLAGAF VSDAYLGRFW TLLLGSIASF
101: IGMGIFALTA ALPSLRPDAC IDPSNCSNQP AKWQLGVLFS GLGLLAIGAG GVRPCNIAFG ADQFDTSTKK GKAHLETFFN WWYFSFTVAL VIALTGVVYI
201: QTNISWVIGF VIPTACLALS ITTFVIGQHT YICAKAEGSV FADIVKVVTA ACKKRKVKPG SDITFYIGPS NDGSPTTLVR DKHRLRFFDK ASIVTNPNEL
301: NEDGNAKYKW RLCSVQQVKN LKCVTAILPV WVTGIACFIL TDQQNIYGIL QAMQMDKTFG PHNFQVPAGW MNLVSMITLA IWISLYECVI IPIVKQITGR
401: KKRLTLKHRI EIGIVMGIIC MIVAGFQEKK RRASALKNGS FVSPVSIVML LPQFALAGLT EAFSAVALME FLTVRMPEHM RAVAGAIFFL SSSIASYICT
501: LLINVIDAVT RKEGKSWLGD KDLNKNRLEN YFFIIAGIQV ANLLYFRLFA SRYATENKKG H
Arabidopsis Description
Major facilitator superfamily protein [Source:TAIR;Acc:AT5G28470]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.