Factsheet for Bra020609.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

cytosol 1
plasma membrane 3
vacuole 2
extracellular 1
endoplasmic reticulum 1
golgi 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	cytosol, peroxisome, secretory
BaCelLo:	cytosol
MultiLoc:	plasma membrane
Plant-mPloc:	vacuole
PProwler:	secretory
WoLF PSORT:	plasma membrane
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY52504	Canola	plasma membrane	99.83	99.83
CDY05592	Canola	plasma membrane	99.65	99.65
Bra009996.1-P	Field mustard	peroxisome	88.29	88.75
AT5G28470.2	Thale cress	plasma membrane	81.12	82.71
KRH56967	Soybean	peroxisome	55.42	53.1
PGSC0003DMT400065200	Potato	cytosol, peroxisome, plasma membrane	54.37	52.27
Solyc03g113440.2.1	Tomato	plasma membrane	53.85	51.68
Bra003979.1-P	Field mustard	cytosol, peroxisome, plasma membrane	22.9	38.08
Bra007886.1-P	Field mustard	cytosol, peroxisome, plasma membrane	39.16	37.9
Bra035886.1-P	Field mustard	plasma membrane	32.52	37.42
Bra012429.1-P	Field mustard	cytosol, peroxisome, plasma membrane	36.71	36.97
Bra016259.1-P	Field mustard	plastid	39.34	36.17
Bra025695.1-P	Field mustard	plasma membrane	34.97	34.48
Bra019521.1-P	Field mustard	plasma membrane	36.71	34.37
Bra031054.1-P	Field mustard	cytosol, peroxisome, plasma membrane	35.31	34.12
Bra016260.1-P	Field mustard	plasma membrane	32.69	33.94
Bra035885.1-P	Field mustard	peroxisome	33.39	33.87
Bra033782.1-P	Field mustard	cytosol, peroxisome, plasma membrane	36.36	33.82
Bra010111.1-P	Field mustard	plasma membrane	36.01	33.66
Bra027185.1-P	Field mustard	plasma membrane	34.79	33.56
Bra018096.1-P	Field mustard	cytosol, peroxisome, plasma membrane	36.01	33.5
Bra029248.1-P	Field mustard	plasma membrane	35.66	33.33
Bra004320.1-P	Field mustard	cytosol, peroxisome, plasma membrane	34.27	33.11
Bra004030.1-P	Field mustard	cytosol, peroxisome, plasma membrane	33.92	32.55
Bra018952.1-P	Field mustard	plasma membrane	34.44	32.51
Bra038366.1-P	Field mustard	plasma membrane	25.7	31.68
Bra038367.1-P	Field mustard	cytosol, peroxisome, plasma membrane	33.22	31.46
Bra021295.1-P	Field mustard	plasma membrane	27.45	28.19
Bra033955.1-P	Field mustard	plasma membrane	26.22	27.32
Bra033836.1-P	Field mustard	plasma membrane	23.95	26.25
Bra033884.1-P	Field mustard	plasma membrane	11.19	25.7
Bra021168.1-P	Field mustard	plasma membrane	34.27	22.5
Bra016534.1-P	Field mustard	plastid	35.14	19.48
Bra038280.1-P	Field mustard	plasma membrane	26.57	13.61
Bra008953.1-P	Field mustard	plasma membrane	28.32	10.48

Protein Annotations

Gene3D:1.20.1250.20	MapMan:24.2.2.9	EnsemblPlantsGene:Bra020609	EnsemblPlants:Bra020609.1	EnsemblPlants:Bra020609.1-P	GO:GO:0003674
GO:GO:0005215	GO:GO:0005575	GO:GO:0006810	GO:GO:0008150	GO:GO:0016020	GO:GO:0016021
GO:GO:0022857	GO:GO:0055085	InterPro:IPR020846	UniProt:M4DVR5	InterPro:MFS_dom	InterPro:MFS_trans_sf
PFAM:PF00854	InterPro:POT_fam	PANTHER:PTHR11654	PANTHER:PTHR11654:SF181	SUPFAM:SSF103473	TMHMM:TMhelix
UniParc:UPI00025468D4	SEG:seg	:	:	:	:

Description

AT5G28470 (E=5e-252) | transporter

Coordinates

chrA02:-:24231408..24234411

Molecular Weight (calculated)

63332.8 Da

IEP (calculated)

9.402

GRAVY (calculated)

0.288

Length

572 amino acids

Sequence
(BLAST)

001: MDIESSTTLS PHVHQESTNP APDMKHRGGW RAIKYIIANE SFEKLASMSL IGNLSVYLTT KYNLGGVFLV NIINIWSGSC NFLSIPGAFV SDAYLGRFWT
101: LLLGSISSFL GMGIIALTAA LPRLRPEACK DPTNCSNPPE RWQLAVLFAG LGLLAIGSGG IRPCNIAFGA DQFDTDTKKG KSQLETFFNW WYFSFTVALV
201: IALTGVVYIQ TNISWVIGFV IPTACLALSV TTFLIGKHTY ICAEPKGSVF ADIVKVVAAA CKKRKVKSGE GVTFYLGPSS DGSSSTLVQD RQRLRFVEKA
301: AVITDPNELN EEGKAKNNWR LCSVEQVKNL KCVTGILPVW VTGIACFMLT DQQNIYGILQ AIQMEKTFGH NFQVPAGWMN LVSMITLAVW ISLYECVILP
401: IARQITGRKQ RLNMKQRIQI GIVMGIACML VAGFLEKARR EAALKKGSFV SPVSIVMLLP QFMLAGLTEA FSAVALMEFL TVKMPEHMRA VAGAIFFLSS
501: SIASYICTLL INVIDSVTRK EGRSWLGDKD LNKNRLEYYF FIIGGVQVLN LLYFRFFASR FVTEKNKDNR DF

Best Arabidopsis Sequence Match ( AT5G28470.2 )
(BLAST)

001: MDVESSSPSS HALIKKEKGG WRAIKYIIAN ESFEKLASMS LIGNLSVYLM TKYNLGGVFL VNVINIWFGS CNILTLAGAF VSDAYLGRFW TLLLGSIASF
101: IGMGIFALTA ALPSLRPDAC IDPSNCSNQP AKWQLGVLFS GLGLLAIGAG GVRPCNIAFG ADQFDTSTKK GKAHLETFFN WWYFSFTVAL VIALTGVVYI
201: QTNISWVIGF VIPTACLALS ITTFVIGQHT YICAKAEGSV FADIVKVVTA ACKKRKVKPG SDITFYIGPS NDGSPTTLVR DKHRLRFFDK ASIVTNPNEL
301: NEDGNAKYKW RLCSVQQVKN LKCVTAILPV WVTGIACFIL TDQQNIYGIL QAMQMDKTFG PHNFQVPAGW MNLVSMITLA IWISLYECVI IPIVKQITGR
401: KKRLTLKHRI EIGIVMGIIC MIVAGFQEKK RRASALKNGS FVSPVSIVML LPQFALAGLT EAFSAVALME FLTVRMPEHM RAVAGAIFFL SSSIASYICT
501: LLINVIDAVT RKEGKSWLGD KDLNKNRLEN YFFIIAGIQV ANLLYFRLFA SRYATENKKG H

Arabidopsis Description

Major facilitator superfamily protein [Source:TAIR;Acc:AT5G28470]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.