Factsheet for AT5G28470.2

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

nucleus 1
plasma membrane 3
vacuole 2
extracellular 1
endoplasmic reticulum 1
golgi 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	nucleus, peroxisome, secretory
BaCelLo:	nucleus
MultiLoc:	plasma membrane
Plant-mPloc:	vacuole
PProwler:	secretory
WoLF PSORT:	plasma membrane
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY52480	Canola	plasma membrane	67.2	81.78
CDX86198	Canola	peroxisome	82.89	81.72
Bra009996.1-P	Field mustard	peroxisome	82.89	81.72
CDY05592	Canola	plasma membrane	82.89	81.29
CDY52504	Canola	plasma membrane	82.71	81.12
Bra020609.1-P	Field mustard	plasma membrane	82.71	81.12
KRH56967	Soybean	peroxisome	55.79	52.43
PGSC0003DMT400065200	Potato	cytosol, peroxisome, plasma membrane	54.19	51.09
Solyc03g113440.2.1	Tomato	plasma membrane	54.19	51.01
AT1G27080.1	Thale cress	cytosol, golgi, plasma membrane	37.97	36.98
AT1G18880.1	Thale cress	cytosol, peroxisome, plasma membrane	37.61	35.95
AT1G69870.1	Thale cress	cytosol, nucleus, plasma membrane	39.39	35.65
AT5G62680.1	Thale cress	golgi, peroxisome, vacuole	37.25	33.93
AT1G69860.1	Thale cress	plasma membrane	33.33	33.69
AT3G47960.1	Thale cress	plasma membrane	37.43	33.02
AT3G16180.1	Thale cress	plasma membrane	34.58	32.83
AT1G52190.1	Thale cress	cytosol, peroxisome, plasma membrane	34.76	32.13
AT1G68570.1	Thale cress	cytosol, peroxisome, plasma membrane	34.05	32.05
AT5G11570.1	Thale cress	plasma membrane	26.74	31.18
AT3G45650.2	Thale cress	plasma membrane	29.59	28.42
AT3G45660.2	Thale cress	plasma membrane	29.23	28.37
AT3G45720.1	Thale cress	plasma membrane	27.63	27.93
AT3G45690.1	Thale cress	plasma membrane	25.67	27.91
AT3G45680.1	Thale cress	plasma membrane	27.63	27.78
AT3G45700.1	Thale cress	plasma membrane	26.56	27.19
AT3G45710.1	Thale cress	plasma membrane	25.13	25.18

Protein Annotations

Gene3D:1.20.1250.20	MapMan:24.2.2.9	EntrezGene:832936	UniProt:A0A1P8BHI2	ProteinID:ANM71046.1	ArrayExpress:AT5G28470
EnsemblPlantsGene:AT5G28470	RefSeq:AT5G28470	TAIR:AT5G28470	RefSeq:AT5G28470-TAIR-G	EnsemblPlants:AT5G28470.2	Unigene:At.55068
GO:GO:0003674	GO:GO:0005215	GO:GO:0005575	GO:GO:0006810	GO:GO:0008150	GO:GO:0016020
GO:GO:0016021	GO:GO:0022857	GO:GO:0055085	InterPro:IPR020846	InterPro:MFS_dom	InterPro:MFS_trans_sf
RefSeq:NP_001332604.1	PFAM:PF00854	InterPro:POT_fam	PANTHER:PTHR11654	PANTHER:PTHR11654:SF181	SUPFAM:SSF103473
TMHMM:TMhelix	UniParc:UPI0000162644	SEG:seg	:	:	:

Description

Major facilitator superfamily protein [Source:TAIR;Acc:AT5G28470]

Coordinates

chr5:+:10428733..10432357

Molecular Weight (calculated)

61774.2 Da

IEP (calculated)

9.822

GRAVY (calculated)

0.383

Length

561 amino acids

Sequence
(BLAST)

001: MDVESSSPSS HALIKKEKGG WRAIKYIIAN ESFEKLASMS LIGNLSVYLM TKYNLGGVFL VNVINIWFGS CNILTLAGAF VSDAYLGRFW TLLLGSIASF
101: IGMGIFALTA ALPSLRPDAC IDPSNCSNQP AKWQLGVLFS GLGLLAIGAG GVRPCNIAFG ADQFDTSTKK GKAHLETFFN WWYFSFTVAL VIALTGVVYI
201: QTNISWVIGF VIPTACLALS ITTFVIGQHT YICAKAEGSV FADIVKVVTA ACKKRKVKPG SDITFYIGPS NDGSPTTLVR DKHRLRFFDK ASIVTNPNEL
301: NEDGNAKYKW RLCSVQQVKN LKCVTAILPV WVTGIACFIL TDQQNIYGIL QAMQMDKTFG PHNFQVPAGW MNLVSMITLA IWISLYECVI IPIVKQITGR
401: KKRLTLKHRI EIGIVMGIIC MIVAGFQEKK RRASALKNGS FVSPVSIVML LPQFALAGLT EAFSAVALME FLTVRMPEHM RAVAGAIFFL SSSIASYICT
501: LLINVIDAVT RKEGKSWLGD KDLNKNRLEN YFFIIAGIQV ANLLYFRLFA SRYATENKKG H

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.