Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- cytosol 1
- plasma membrane 4
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- golgi 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| AT3G45710.1 | Thale cress | plasma membrane | 84.85 | 83.04 |
| AT3G45680.1 | Thale cress | plasma membrane | 77.19 | 75.81 |
| CDX81495 | Canola | plasma membrane | 70.44 | 74.37 |
| CDY12696 | Canola | plasma membrane | 69.89 | 74.08 |
| Bra033955.1-P | Field mustard | plasma membrane | 73.91 | 73.77 |
| Bra021295.1-P | Field mustard | plasma membrane | 74.82 | 73.61 |
| CDY18499 | Canola | plasma membrane | 74.82 | 73.61 |
| AT3G45690.1 | Thale cress | plasma membrane | 69.16 | 73.45 |
| AT3G45720.1 | Thale cress | plasma membrane | 71.72 | 70.81 |
| AT3G45650.2 | Thale cress | plasma membrane | 65.88 | 61.82 |
| AT3G45660.2 | Thale cress | plasma membrane | 61.5 | 58.3 |
| PGSC0003DMT400056834 | Potato | endoplasmic reticulum, plasma membrane | 19.71 | 51.92 |
| PGSC0003DMT400019427 | Potato | endoplasmic reticulum, plasma membrane | 19.71 | 51.67 |
| Solyc06g075500.2.1 | Tomato | plasma membrane | 48.54 | 48.99 |
| PGSC0003DMT400019420 | Potato | plasma membrane | 48.72 | 48.9 |
| Solyc06g075450.1.1 | Tomato | extracellular, plasma membrane, vacuole | 48.54 | 48.72 |
| Solyc06g075490.1.1 | Tomato | plasma membrane | 48.72 | 48.63 |
| PGSC0003DMT400016889 | Potato | plasma membrane | 48.91 | 48.55 |
| Solyc06g075480.2.1 | Tomato | plasma membrane | 48.72 | 48.19 |
| PGSC0003DMT400019426 | Potato | plasma membrane | 48.54 | 48.1 |
| PGSC0003DMT400065310 | Potato | plasma membrane | 48.36 | 47.75 |
| Solyc11g072580.1.1 | Tomato | plasma membrane | 47.81 | 47.72 |
| PGSC0003DMT400065303 | Potato | plasma membrane | 45.8 | 47.72 |
| PGSC0003DMT400019424 | Potato | mitochondrion | 29.2 | 47.62 |
| VIT_06s0004g03530.t01 | Wine grape | plasma membrane | 49.45 | 46.97 |
| VIT_06s0004g03520.t01 | Wine grape | plasma membrane | 49.45 | 46.97 |
| KRH22952 | Soybean | plasma membrane | 46.35 | 46.95 |
| Solyc06g075440.1.1 | Tomato | plasma membrane | 44.16 | 45.57 |
| Solyc11g072560.1.1 | Tomato | plasma membrane | 42.7 | 45.53 |
| Solyc11g072570.1.1 | Tomato | plasma membrane | 45.99 | 45.08 |
| PGSC0003DMT400019419 | Potato | plasma membrane | 41.61 | 45.06 |
| TraesCS7D01G049400.1 | Wheat | plasma membrane | 43.43 | 42.5 |
| TraesCS4A01G440700.1 | Wheat | plasma membrane | 43.25 | 42.4 |
| TraesCS7A01G054100.1 | Wheat | plasma membrane | 43.25 | 42.25 |
| Os05t0338900-00 | Rice | plasma membrane | 15.51 | 41.46 |
| TraesCS5B01G152000.1 | Wheat | plasma membrane | 42.88 | 41.3 |
| TraesCS7A01G121700.1 | Wheat | golgi, peroxisome, plasma membrane | 42.52 | 40.95 |
| TraesCS5D01G158500.1 | Wheat | plasma membrane | 42.34 | 40.56 |
| TraesCS7D01G120200.1 | Wheat | cytosol, plasma membrane, vacuole | 41.97 | 40.49 |
| TraesCS7D01G049300.1 | Wheat | plasma membrane | 40.69 | 40.47 |
| TraesCS4A01G440600.1 | Wheat | plasma membrane | 40.69 | 40.47 |
| TraesCS4A01G440400.1 | Wheat | plasma membrane | 40.69 | 40.47 |
| TraesCS7D01G119900.1 | Wheat | plasma membrane | 41.79 | 40.32 |
| TraesCS7A01G054000.2 | Wheat | plasma membrane | 40.51 | 40.29 |
| TraesCS4A01G440500.1 | Wheat | plasma membrane | 40.51 | 40.29 |
| TraesCS7D01G119800.1 | Wheat | plasma membrane | 40.69 | 40.11 |
| GSMUA_Achr6P15780_001 | Banana | plasma membrane | 36.5 | 40.08 |
| TraesCS5A01G153200.1 | Wheat | plasma membrane | 42.7 | 40.07 |
| TraesCS4A01G440300.1 | Wheat | plasma membrane | 40.15 | 39.93 |
| HORVU7Hr1G025670.1 | Barley | plasma membrane | 41.24 | 39.86 |
| TraesCS7B01G020500.1 | Wheat | plasma membrane | 41.06 | 39.61 |
| GSMUA_Achr10P... | Banana | plasma membrane | 34.31 | 39.41 |
| HORVU7Hr1G025680.3 | Barley | plasma membrane | 40.88 | 39.3 |
| HORVU5Hr1G047970.5 | Barley | mitochondrion | 42.7 | 38.94 |
| TraesCS7B01G020300.1 | Wheat | plasma membrane | 41.79 | 38.49 |
| KXG21716 | Sorghum | cytosol, peroxisome, plasma membrane | 40.15 | 38.0 |
| TraesCS7A01G121600.1 | Wheat | plastid | 38.32 | 37.97 |
| TraesCS7B01G020200.1 | Wheat | peroxisome, plasma membrane, vacuole | 23.54 | 33.25 |
| AT1G18880.1 | Thale cress | cytosol, peroxisome, plasma membrane | 32.85 | 30.66 |
| AT5G11570.1 | Thale cress | plasma membrane | 26.28 | 29.94 |
| AT1G68570.1 | Thale cress | cytosol, peroxisome, plasma membrane | 31.75 | 29.19 |
| AT1G27080.1 | Thale cress | cytosol, golgi, plasma membrane | 29.93 | 28.47 |
| AT1G69870.1 | Thale cress | cytosol, nucleus, plasma membrane | 31.93 | 28.23 |
| AT1G52190.1 | Thale cress | cytosol, peroxisome, plasma membrane | 31.2 | 28.17 |
| AT3G16180.1 | Thale cress | plasma membrane | 29.93 | 27.75 |
| AT5G62680.1 | Thale cress | golgi, peroxisome, vacuole | 30.47 | 27.11 |
| AT5G28470.2 | Thale cress | plasma membrane | 27.19 | 26.56 |
| AT3G47960.1 | Thale cress | plasma membrane | 30.47 | 26.26 |
| AT1G69860.1 | Thale cress | plasma membrane | 26.28 | 25.95 |
Protein Annotations
| Gene3D:1.20.1250.20 | MapMan:24.2.2.9 | EntrezGene:823712 | ProteinID:AEE78061.1 | EMBL:AK117193 | ArrayExpress:AT3G45700 |
| EnsemblPlantsGene:AT3G45700 | RefSeq:AT3G45700 | TAIR:AT3G45700 | RefSeq:AT3G45700-TAIR-G | EnsemblPlants:AT3G45700.1 | TAIR:AT3G45700.1 |
| Unigene:At.35997 | EMBL:BT005911 | ProteinID:CAB75783.1 | GO:GO:0003674 | GO:GO:0005215 | GO:GO:0005575 |
| GO:GO:0005623 | GO:GO:0005886 | GO:GO:0006810 | GO:GO:0006857 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009987 | GO:GO:0015108 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0022857 | GO:GO:0042128 |
| GO:GO:0055085 | GO:GO:1902476 | InterPro:MFS_trans_sf | RefSeq:NP_190156.1 | PFAM:PF00854 | PO:PO:0009005 |
| PO:PO:0020100 | InterPro:POT_fam | ScanProsite:PS01022 | PANTHER:PTHR11654 | PANTHER:PTHR11654:SF19 | InterPro:PTR2_symporter_CS |
| UniProt:Q9M173 | SUPFAM:SSF103473 | TMHMM:TMhelix | UniParc:UPI00000487DD | SEG:seg | : |
Description
NPF2.4Protein NRT1/ PTR FAMILY 2.4 [Source:UniProtKB/Swiss-Prot;Acc:Q9M173]
Coordinates
chr3:+:16778713..16781268
Molecular Weight (calculated)
60831.7 Da
IEP (calculated)
9.438
GRAVY (calculated)
0.339
Length
548 amino acids
Sequence
(BLAST)
(BLAST)
001: MANSDSGDKE AHRSSKHGGW ITLPFMLVTL LGMSITYFGW VMNLIVFLIE EFNIKSIAAV QISNIVNGVV NMLPVVAAIL ADSFFGNIPV ISASAFISLT
101: GISLLTLIAS LDYLRPRPCE TGSILCQSPS KLQLGILYAA LALVITGTAG TRFILASAGA NQYKKPKEQG RFFNWYFFTL YGGAITGTTA IVYAQDNASW
201: KLGFGLCVAA NLISFIIFVA GKRLYEHDQP LGSPYTSLVR VLVAATMKRK AVISYKDEDY HHRELEKETK TYVAMPSKSF RFLNRAALKT EGDSNNNMWR
301: LCSVQEVEDF KAVLRLVPLW TSVMFLSAPL AVQMSMTVLQ AMVMDRKLGP HFKVSAGSMQ VIALVSGCVF IILNNWTTYP MYQKLIRKPL TPLQKVGIGH
401: VLTILSMAIS AVVEAKRLKT VENSHLMSVL WLVPALVING IGEAFHFPAN IAIFYGEFPE SLRNTATSLT SVVMGISFYL STALIDVIQR TTKWLPNDIN
501: HGRVDNVYLV LVIIGVSNFG YFLVCSWFYK YRNLKNDDHE QDLKDVTN
101: GISLLTLIAS LDYLRPRPCE TGSILCQSPS KLQLGILYAA LALVITGTAG TRFILASAGA NQYKKPKEQG RFFNWYFFTL YGGAITGTTA IVYAQDNASW
201: KLGFGLCVAA NLISFIIFVA GKRLYEHDQP LGSPYTSLVR VLVAATMKRK AVISYKDEDY HHRELEKETK TYVAMPSKSF RFLNRAALKT EGDSNNNMWR
301: LCSVQEVEDF KAVLRLVPLW TSVMFLSAPL AVQMSMTVLQ AMVMDRKLGP HFKVSAGSMQ VIALVSGCVF IILNNWTTYP MYQKLIRKPL TPLQKVGIGH
401: VLTILSMAIS AVVEAKRLKT VENSHLMSVL WLVPALVING IGEAFHFPAN IAIFYGEFPE SLRNTATSLT SVVMGISFYL STALIDVIQR TTKWLPNDIN
501: HGRVDNVYLV LVIIGVSNFG YFLVCSWFYK YRNLKNDDHE QDLKDVTN
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.