Subcellular Localization
min:
: max
Winner_takes_all: peroxisome, vacuole, plasma membrane
Predictor Summary:
Predictor Summary:
- vacuole 2
- extracellular 1
- endoplasmic reticulum 1
- plasma membrane 2
- golgi 1
- peroxisome 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS7A01G121600.1 | Wheat | plastid | 78.09 | 54.79 |
| TraesCS7D01G119800.1 | Wheat | plasma membrane | 75.52 | 52.7 |
| HORVU7Hr1G025670.1 | Barley | plasma membrane | 76.29 | 52.2 |
| TraesCS7B01G020300.1 | Wheat | plasma membrane | 78.35 | 51.09 |
| TraesCS7B01G020500.1 | Wheat | plasma membrane | 73.2 | 50.0 |
| KXG21716 | Sorghum | cytosol, peroxisome, plasma membrane | 59.28 | 39.72 |
| CDX86030 | Canola | plasma membrane | 27.84 | 39.71 |
| GSMUA_Achr6P15780_001 | Banana | plasma membrane | 41.75 | 32.46 |
| GSMUA_Achr10P... | Banana | plasma membrane | 39.69 | 32.29 |
| TraesCS5B01G152000.1 | Wheat | plasma membrane | 43.56 | 29.7 |
| VIT_06s0004g03520.t01 | Wine grape | plasma membrane | 40.46 | 27.21 |
| VIT_06s0004g03530.t01 | Wine grape | plasma membrane | 40.21 | 27.04 |
| Solyc06g075480.2.1 | Tomato | plasma membrane | 37.89 | 26.53 |
| PGSC0003DMT400019420 | Potato | plasma membrane | 36.6 | 26.01 |
| Solyc06g075490.1.1 | Tomato | plasma membrane | 35.82 | 25.32 |
| Solyc06g075450.1.1 | Tomato | extracellular, plasma membrane, vacuole | 35.57 | 25.27 |
| AT3G45680.1 | Thale cress | plasma membrane | 36.34 | 25.27 |
| AT3G45690.1 | Thale cress | plasma membrane | 33.51 | 25.19 |
| CDY12696 | Canola | plasma membrane | 33.51 | 25.15 |
| CDX81495 | Canola | plasma membrane | 33.25 | 24.86 |
| KRH22952 | Soybean | plasma membrane | 34.54 | 24.77 |
| PGSC0003DMT400065310 | Potato | plasma membrane | 35.31 | 24.68 |
| PGSC0003DMT400016889 | Potato | plasma membrane | 35.05 | 24.64 |
| Solyc06g075500.2.1 | Tomato | plasma membrane | 34.28 | 24.49 |
| PGSC0003DMT400019426 | Potato | plasma membrane | 34.54 | 24.23 |
| Solyc11g072580.1.1 | Tomato | plasma membrane | 34.02 | 24.04 |
| Solyc11g072560.1.1 | Tomato | plasma membrane | 31.7 | 23.93 |
| Bra033955.1-P | Field mustard | plasma membrane | 33.76 | 23.86 |
| Solyc11g072570.1.1 | Tomato | plasma membrane | 34.28 | 23.79 |
| Solyc06g075440.1.1 | Tomato | plasma membrane | 32.47 | 23.73 |
| CDY18499 | Canola | plasma membrane | 34.02 | 23.7 |
| Bra021295.1-P | Field mustard | plasma membrane | 34.02 | 23.7 |
| AT3G45700.1 | Thale cress | plasma membrane | 33.25 | 23.54 |
| CDX99152 | Canola | plasma membrane | 33.76 | 23.52 |
| AT3G45660.2 | Thale cress | plasma membrane | 34.54 | 23.18 |
| CDX99151 | Canola | plasma membrane | 32.99 | 23.06 |
| AT3G45720.1 | Thale cress | plasma membrane | 32.73 | 22.88 |
| Bra033836.1-P | Field mustard | plasma membrane | 30.67 | 22.8 |
| AT3G45650.2 | Thale cress | plasma membrane | 34.28 | 22.77 |
| PGSC0003DMT400019419 | Potato | plasma membrane | 29.38 | 22.53 |
| PGSC0003DMT400016891 | Potato | plasma membrane | 27.32 | 22.22 |
| PGSC0003DMT400065303 | Potato | plasma membrane | 29.9 | 22.05 |
| AT3G45710.1 | Thale cress | plasma membrane | 31.7 | 21.96 |
| CDY48147 | Canola | plasma membrane | 30.15 | 21.23 |
| TraesCS5B01G001100.1 | Wheat | cytosol, nucleus, plasma membrane | 29.9 | 19.11 |
| TraesCS4B01G029600.1 | Wheat | cytosol, peroxisome, plasma membrane | 28.35 | 18.49 |
| TraesCS7B01G113600.2 | Wheat | cytosol, nucleus, peroxisome | 29.12 | 18.43 |
| TraesCS2B01G057700.1 | Wheat | plasma membrane | 27.58 | 17.86 |
| TraesCS2B01G057600.1 | Wheat | cytosol, peroxisome, plasma membrane | 27.58 | 17.69 |
| TraesCS5B01G039100.1 | Wheat | cytosol, nucleus, plasma membrane | 28.09 | 17.64 |
| TraesCS1B01G268300.1 | Wheat | cytosol, nucleus, plasma membrane | 26.03 | 17.0 |
| TraesCS1B01G268200.1 | Wheat | plasma membrane | 26.29 | 16.06 |
| TraesCS3B01G332000.1 | Wheat | plasma membrane | 24.23 | 16.04 |
| TraesCS3B01G454100.1 | Wheat | plasma membrane | 25.0 | 16.03 |
| TraesCS1B01G267900.1 | Wheat | plasma membrane | 25.0 | 15.98 |
| TraesCS3B01G332100.1 | Wheat | plasma membrane | 23.97 | 15.82 |
| TraesCS3B01G454000.1 | Wheat | plasma membrane | 23.45 | 14.94 |
| PGSC0003DMT400019424 | Potato | mitochondrion | 10.82 | 12.5 |
| Bra038280.1-P | Field mustard | plasma membrane | 33.25 | 11.55 |
| Os05t0338900-00 | Rice | plasma membrane | 4.38 | 8.29 |
| CDX86031 | Canola | plasma membrane | 2.84 | 7.1 |
| PGSC0003DMT400056834 | Potato | endoplasmic reticulum, plasma membrane | 2.32 | 4.33 |
| PGSC0003DMT400019427 | Potato | endoplasmic reticulum, plasma membrane | 2.32 | 4.31 |
Protein Annotations
| EnsemblPlants:TraesCS7B01G020200.1 | EnsemblPlantsGene:TraesCS7B01G020200 | Gene3D:1.20.1250.20 | GO:GO:0003674 | GO:GO:0005215 | GO:GO:0005575 |
| GO:GO:0006810 | GO:GO:0008150 | GO:GO:0016020 | GO:GO:0022857 | GO:GO:0055085 | InterPro:MFS_trans_sf |
| InterPro:POT_fam | PANTHER:PTHR11654 | PANTHER:PTHR11654:SF19 | PFAM:PF00854 | SEG:seg | SUPFAM:SSF103473 |
| TMHMM:TMhelix | MapMan:24.2.2.9 | : | : | : | : |
Description
No Description!
Coordinates
chr7B:+:17662362..17667498
Molecular Weight (calculated)
40660.6 Da
IEP (calculated)
8.741
GRAVY (calculated)
0.221
Length
388 amino acids
Sequence
(BLAST)
(BLAST)
001: MEANGSQQEE EPRHLSSGDH ESLKEPRNGK GGWITFPFLA VAILGVGLAT GGATANMVVY LIKEYNVPSV DAAKISNIIS GSISVAPVAG AIVADAFFGS
101: FPIVAVAMVM AVLSLVMFTL AASLPGLRPA ACQLGAGPCE QASAGQMAAL YAAVFLLCLS AAGARFNQAT MGANQFEAAA DRDVFFNWYF IFFYASTVLG
201: ATVIVYVQDT VSWTLGFGVS CAAGVVGLAA LLLGTRYYRQ PPAQGSPFTG LARVVVAAAR KRKLNVVASE ELKFYYGLRT GDEDVKTGGD DVAIPSDSFS
301: FLNRAAVITD GDVDARAARC SGRGACARCS RWRSSRRCCA SCRCGARPSC SASPSACRST SPSYRRSPWT APSAASPRRR APCSWAAS
101: FPIVAVAMVM AVLSLVMFTL AASLPGLRPA ACQLGAGPCE QASAGQMAAL YAAVFLLCLS AAGARFNQAT MGANQFEAAA DRDVFFNWYF IFFYASTVLG
201: ATVIVYVQDT VSWTLGFGVS CAAGVVGLAA LLLGTRYYRQ PPAQGSPFTG LARVVVAAAR KRKLNVVASE ELKFYYGLRT GDEDVKTGGD DVAIPSDSFS
301: FLNRAAVITD GDVDARAARC SGRGACARCS RWRSSRRCCA SCRCGARPSC SASPSACRST SPSYRRSPWT APSAASPRRR APCSWAAS
001: MSGSVSRDAE ALKSADSSTR RSGGRITFPF MIVTLFGLTL ATLGWLQNLI VYLIEEYNMK SIAAAKILNI FSGFTFMFPA IGAIAADSFF GTIPVILVSS
101: FISLVGVVLL ALTTLFDSLR PQACETASKL CQAPTNIQLG VLYTAITLGC VGAGGLRFTL ATAGANQYEK TKDQGSFFNW FFFTWYLAAS ISATAIVYAE
201: ENISWSFGFG LCVAANLLGL IVFISGKKFY KHDKPLGSPF TSLLRVIFAA IRKRKAVVST NEKDYHSESK KTPTKSFRFF NRAALKQDDE VNSDGTIHNQ
301: WRLCSVQQVE DFKAVIRIIP LVLAILFLST PIAMQLGLTV LQGLVMDRRL GPHFKIPAGS LQVITLLSTC LFIIVNDRFL YPFYQKLTGK FPTPIQRVGI
401: GHVFNILSMA VTAIVEAKRL KIVQKGHFLG SSSVADMSVL WLFPPLVIVG IGEAFHFPGN VALCYQEFPE SMRSTATSIT SVLIGICFYT STALIDLIQK
501: TTAWLPDDIN HGRVDNVYWI LVIGGVLNLG YFLVCSWFYK YRNLENADHE QDANVSH
101: FISLVGVVLL ALTTLFDSLR PQACETASKL CQAPTNIQLG VLYTAITLGC VGAGGLRFTL ATAGANQYEK TKDQGSFFNW FFFTWYLAAS ISATAIVYAE
201: ENISWSFGFG LCVAANLLGL IVFISGKKFY KHDKPLGSPF TSLLRVIFAA IRKRKAVVST NEKDYHSESK KTPTKSFRFF NRAALKQDDE VNSDGTIHNQ
301: WRLCSVQQVE DFKAVIRIIP LVLAILFLST PIAMQLGLTV LQGLVMDRRL GPHFKIPAGS LQVITLLSTC LFIIVNDRFL YPFYQKLTGK FPTPIQRVGI
401: GHVFNILSMA VTAIVEAKRL KIVQKGHFLG SSSVADMSVL WLFPPLVIVG IGEAFHFPGN VALCYQEFPE SMRSTATSIT SVLIGICFYT STALIDLIQK
501: TTAWLPDDIN HGRVDNVYWI LVIGGVLNLG YFLVCSWFYK YRNLENADHE QDANVSH
Arabidopsis Description
Major facilitator superfamily protein [Source:UniProtKB/TrEMBL;Acc:A0A1I9LN67]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.