Factsheet for TraesCS5B01G039100.1

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, nucleus, cytosol

Predictor Summary:

cytosol 1
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 2
golgi 1
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, nucleus, plasma membrane
Any Predictor:	cytosol, nucleus, secretory
MultiLoc:	cytosol
PProwler:	secretory
WoLF PSORT:	plasma membrane
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5D01G045300.1	Wheat	cytosol, peroxisome, plasma membrane	94.01	94.63
TraesCS5A01G037900.1	Wheat	cytosol, peroxisome, plasma membrane	93.37	93.67
TraesCS5B01G001100.1	Wheat	cytosol, nucleus, plasma membrane	79.29	80.72
TraesCS2B01G057700.1	Wheat	plasma membrane	74.43	76.79
TraesCS2B01G057600.1	Wheat	cytosol, peroxisome, plasma membrane	73.3	74.88
Zm00001d031213_P001	Maize	plasma membrane	56.8	68.96
KXG24141	Sorghum	cytosol, peroxisome, plasma membrane	63.92	66.5
Os12t0638300-01	Rice	extracellular, plasma membrane	62.3	65.59
EES16414	Sorghum	cytosol, peroxisome, plasma membrane	62.95	65.16
Os12t0638200-01	Rice	cytosol, endoplasmic reticulum, peroxisome	60.52	63.61
TraesCS4B01G029600.1	Wheat	cytosol, peroxisome, plasma membrane	53.24	55.29
GSMUA_Achr5P15030_001	Banana	cytosol	42.07	54.85
GSMUA_Achr5P15010_001	Banana	cytosol, peroxisome, plasma membrane	49.51	54.64
Solyc03g113430.2.1	Tomato	plasma membrane	50.0	52.82
PGSC0003DMT400065197	Potato	mitochondrion	49.84	52.65
VIT_14s0066g02590.t01	Wine grape	plasma membrane	49.51	52.31
PGSC0003DMT400065196	Potato	plasma membrane	48.54	50.76
Solyc03g113420.2.1	Tomato	plasma membrane	48.06	50.6
Solyc06g071570.2.1	Tomato	plasma membrane	46.76	50.0
Bra035886.1-P	Field mustard	plasma membrane	40.13	49.9
PGSC0003DMT400069660	Potato	plasma membrane	46.44	49.65
KRH56970	Soybean	cytosol, peroxisome, plasma membrane	46.93	48.58
CDY45756	Canola	plasma membrane	44.82	48.51
KRH03408	Soybean	cytosol, peroxisome, plasma membrane	46.28	48.31
KRH56968	Soybean	plasma membrane	46.28	47.99
KRH03412	Soybean	plasma membrane	45.15	47.61
CDY30731	Canola	plasma membrane	46.12	47.58
CDY09846	Canola	plasma membrane	32.85	47.32
Bra029248.1-P	Field mustard	plasma membrane	46.6	47.06
CDY00315	Canola	plasma membrane	46.28	46.73
CDX84344	Canola	plasma membrane	45.47	46.68
Bra010111.1-P	Field mustard	plasma membrane	46.12	46.57
CDY45754	Canola	plasma membrane	45.31	46.51
KRH03409	Soybean	plasma membrane	45.95	46.41
KRH56969	Soybean	plasma membrane	45.79	46.32
Bra035885.1-P	Field mustard	peroxisome	42.23	46.28
CDX87266	Canola	peroxisome	42.88	46.25
CDY16763	Canola	peroxisome	42.88	46.17
Bra025695.1-P	Field mustard	plasma membrane	42.88	45.69
CDY26715	Canola	plasma membrane	42.88	45.69
CDY21692	Canola	plasma membrane	42.39	45.64
Bra031054.1-P	Field mustard	cytosol, peroxisome, plasma membrane	43.69	45.61
CDX81902	Canola	cytosol, peroxisome, plasma membrane	43.69	45.61
Bra019521.1-P	Field mustard	plasma membrane	44.98	45.5
AT5G62680.1	Thale cress	golgi, peroxisome, vacuole	45.15	45.29
AT1G18880.1	Thale cress	cytosol, peroxisome, plasma membrane	42.72	44.97
Bra033782.1-P	Field mustard	cytosol, peroxisome, plasma membrane	44.66	44.88
CDX83801	Canola	cytosol, peroxisome, plasma membrane	42.72	44.67
CDY51783	Canola	cytosol, peroxisome, plasma membrane	43.53	44.61
CDX68450	Canola	cytosol, peroxisome, plasma membrane	44.34	44.55
CDX83027	Canola	cytosol, peroxisome, plasma membrane	43.37	44.52
CDY36913	Canola	cytosol, peroxisome, plasma membrane	44.17	44.39
Bra018096.1-P	Field mustard	cytosol, peroxisome, plasma membrane	44.17	44.39
Solyc06g071090.1.1	Tomato	endoplasmic reticulum, plasma membrane	21.52	43.89
CDY69433	Canola	golgi, peroxisome, plastid	44.82	43.69
CDY21805	Canola	cytosol, peroxisome, plasma membrane	43.69	43.48
AT3G47960.1	Thale cress	plasma membrane	44.01	42.77
CDX96690	Canola	plasma membrane	41.75	42.5
CDY16764	Canola	cytosol, mitochondrion, plasma membrane, plastid	39.16	40.81
TraesCS3B01G454100.1	Wheat	plasma membrane	38.19	39.01
TraesCS7B01G113600.2	Wheat	cytosol, nucleus, peroxisome	38.03	38.34
TraesCS1B01G268300.1	Wheat	cytosol, nucleus, plasma membrane	35.28	36.7
TraesCS3B01G454000.1	Wheat	plasma membrane	35.76	36.29
TraesCS3B01G332000.1	Wheat	plasma membrane	34.3	36.18
TraesCS1B01G267900.1	Wheat	plasma membrane	35.11	35.75
TraesCS1B01G268200.1	Wheat	plasma membrane	34.14	33.23
TraesCS3B01G332100.1	Wheat	plasma membrane	31.39	32.99
TraesCS5B01G152000.1	Wheat	plasma membrane	30.26	32.86
TraesCS7B01G020500.1	Wheat	plasma membrane	29.61	32.22
TraesCS7B01G020300.1	Wheat	plasma membrane	28.96	30.08
TraesCS7B01G020200.1	Wheat	peroxisome, plasma membrane, vacuole	17.64	28.09
Bra016534.1-P	Field mustard	plastid	42.72	25.58
VIT_17s0000g05550.t01	Wine grape	plasma membrane	48.71	17.56

Protein Annotations

EnsemblPlants:TraesCS5B01G039100.1	EnsemblPlantsGene:TraesCS5B01G039100	GO:GO:0003674	GO:GO:0005215	GO:GO:0005575	GO:GO:0006810
GO:GO:0008150	GO:GO:0016020	GO:GO:0022857	GO:GO:0055085	InterPro:IPR020846	InterPro:MFS_dom
InterPro:MFS_trans_sf	InterPro:POT_fam	PANTHER:PTHR11654	PANTHER:PTHR11654:SF59	PFAM:PF00854	SEG:seg
SUPFAM:SSF103473	TIGR:cd06174	TMHMM:TMhelix	MapMan:24.2.2.9	:	:

Description

No Description!

Coordinates

chr5B:+:44137619..44142152

Molecular Weight (calculated)

68140.5 Da

IEP (calculated)

8.295

GRAVY (calculated)

0.130

Length

618 amino acids

Sequence
(BLAST)

001: MDDANKPQRP QQEEEQKPMS EDKTTMMKVL SEDGGGEAEP SWESGDGDAA DHNHRGWKAM PYVIGNETFE KLGTIGTLSN LLVYLTTIYH MPIVKAATLL
101: NVFSGTSNLA TVFGAYISDT YLGRYTTITV GTVSSFIGML ILTLTAALHS LHPPTCSSSK GKQCQGPTDT QLAALLVSFF FLVVGAGGIR PCNLAFGADQ
201: FDPRTADGRR GIASFFNWYY FTFTIAIMIS ATVIIYLQSN VNWALGLAVP AALMGLSCAV FIMGTRLYIR VRPEGSPFTS FAQVLIAATR KRHLRQALDT
301: EAELFDPPHR SKLVSKLAYT NQFTCLDKAA MRTPEDLLCA DGKTPVHLWR LCTVQQVEEV KCLARIIPVW SAGIVYSVVL TQLGTYVVLQ AAQTDRRISN
401: SSSFQIPQGS FIIFQMLALT LWIPIYDRFV VPALRRFTGR EGGITLLQRI GVGLVLSVVT MLVSAAVERR RRSIGSLMPW FWLVPQQLLA GLSEAFGAIG
501: QIEFYYRQFP ENMRSVAGAV TFLGIAVASY ASGLMVTVVH RATRRRDGRP DWLAQDLDEG RVDLFYLVTA ALAAVNVVYF MACARWYRFK KSGDDAHASD
601: DVDLDESPKK AANNMTPV

Best Arabidopsis Sequence Match ( AT1G18880.1 )
(BLAST)

001: MEVEKTEKNI AEDDESKIIY RGWKVMPFII GNETFEKLGI VGSSSNLVIY LTTVFNMKSI TAAKVVNIYG GTSNFGTIVA AFLCDSYFGR YKTLSFAMIA
101: CFLGSVAMDL TAVIHPLHPA QCAKEIGSVC NGPSIGQIMF LAGAMVLLVI GAGGIRPCNL PFGADQFDPK TKEGKRGIES FFNWYFFTFT FAQMVSLTLI
201: VYVQSNVSWS IGLAIPAILM LLGCIIFFAG SKLYVKVKAS GSPIHSITRV IVVAIKKRRL KPVGPNELYN YIASDFKNSK LGHTEQFRFL DKSAIQTQDD
301: KLNKDGSPVD AWKLCSMQQV EEVKCVIRVL PVWLSAALFY LAYIQQTTYT IFQSLQSDRR LGPGSFQIPA GSYTVFLMLG MTIFIPIYDR VLVPFLRKYT
401: GRDGGITQLQ RVGAGLFLCI TSMMVSAIVE QYRRKVALTK PTLGLAPRKG AISSMSGMWL IPQLVLMGIA DALAGVGQME FYYKQFPENM RSFAGSLYYC
501: GIGLASYLST FLLSAVHDTT EGFSGGSWLP EDLNKGRLEY FYFLVAGMMT LNLAYFLLVS HWYRYKDVVA KDKDMDKTSA EFDKVSV

Arabidopsis Description

NPF2.9Protein NRT1/ PTR FAMILY 2.9 [Source:UniProtKB/Swiss-Prot;Acc:Q9M9V7]
SUBAcon: [peroxisome,cytosol,plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.