Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- plastid 1
- plasma membrane 4
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- golgi 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| AT3G45680.1 | Thale cress | plasma membrane | 74.41 | 74.01 |
| AT3G45690.1 | Thale cress | plasma membrane | 67.03 | 72.09 |
| AT3G45700.1 | Thale cress | plasma membrane | 70.81 | 71.72 |
| AT3G45710.1 | Thale cress | plasma membrane | 72.07 | 71.43 |
| CDX99151 | Canola | plasma membrane | 70.09 | 70.09 |
| AT3G45650.2 | Thale cress | plasma membrane | 65.95 | 62.67 |
| AT3G45660.2 | Thale cress | plasma membrane | 63.06 | 60.55 |
| PGSC0003DMT400016889 | Potato | plasma membrane | 49.91 | 50.18 |
| PGSC0003DMT400019424 | Potato | mitochondrion | 30.09 | 49.7 |
| Solyc06g075500.2.1 | Tomato | plasma membrane | 48.29 | 49.36 |
| Solyc06g075490.1.1 | Tomato | plasma membrane | 48.65 | 49.18 |
| PGSC0003DMT400019426 | Potato | plasma membrane | 48.65 | 48.82 |
| PGSC0003DMT400019420 | Potato | plasma membrane | 47.21 | 47.99 |
| Solyc06g075450.1.1 | Tomato | extracellular, plasma membrane, vacuole | 47.03 | 47.8 |
| KRH22952 | Soybean | plasma membrane | 45.95 | 47.13 |
| PGSC0003DMT400056834 | Potato | endoplasmic reticulum, plasma membrane | 17.66 | 47.12 |
| Solyc06g075480.2.1 | Tomato | plasma membrane | 47.03 | 47.11 |
| PGSC0003DMT400019427 | Potato | endoplasmic reticulum, plasma membrane | 17.66 | 46.89 |
| VIT_06s0004g03520.t01 | Wine grape | plasma membrane | 47.93 | 46.1 |
| VIT_06s0004g03530.t01 | Wine grape | plasma membrane | 47.03 | 45.23 |
| PGSC0003DMT400065310 | Potato | plasma membrane | 43.96 | 43.96 |
| Solyc11g072570.1.1 | Tomato | plasma membrane | 44.14 | 43.83 |
| Solyc11g072580.1.1 | Tomato | plasma membrane | 43.06 | 43.53 |
| Solyc06g075440.1.1 | Tomato | plasma membrane | 41.62 | 43.5 |
| PGSC0003DMT400065303 | Potato | plasma membrane | 40.9 | 43.16 |
| PGSC0003DMT400019419 | Potato | plasma membrane | 39.1 | 42.89 |
| Solyc11g072560.1.1 | Tomato | plasma membrane | 38.74 | 41.83 |
| GSMUA_Achr10P... | Banana | plasma membrane | 35.32 | 41.09 |
| TraesCS7D01G049400.1 | Wheat | plasma membrane | 40.9 | 40.54 |
| TraesCS7A01G121700.1 | Wheat | golgi, peroxisome, plasma membrane | 41.44 | 40.42 |
| TraesCS7D01G120200.1 | Wheat | cytosol, plasma membrane, vacuole | 41.26 | 40.32 |
| TraesCS7A01G054100.1 | Wheat | plasma membrane | 40.72 | 40.29 |
| TraesCS7D01G119900.1 | Wheat | plasma membrane | 41.08 | 40.14 |
| TraesCS4A01G440700.1 | Wheat | plasma membrane | 40.36 | 40.07 |
| TraesCS5B01G152000.1 | Wheat | plasma membrane | 40.9 | 39.89 |
| TraesCS7B01G020500.1 | Wheat | plasma membrane | 40.72 | 39.79 |
| TraesCS7D01G119800.1 | Wheat | plasma membrane | 39.82 | 39.75 |
| GSMUA_Achr6P15780_001 | Banana | plasma membrane | 35.5 | 39.48 |
| TraesCS5D01G158500.1 | Wheat | plasma membrane | 40.36 | 39.16 |
| HORVU7Hr1G025670.1 | Barley | plasma membrane | 40.0 | 39.15 |
| HORVU7Hr1G025680.3 | Barley | plasma membrane | 40.18 | 39.12 |
| TraesCS7A01G054000.2 | Wheat | plasma membrane | 38.56 | 38.84 |
| TraesCS7D01G049300.1 | Wheat | plasma membrane | 38.38 | 38.66 |
| TraesCS5A01G153200.1 | Wheat | plasma membrane | 40.54 | 38.53 |
| TraesCS4A01G440400.1 | Wheat | plasma membrane | 38.2 | 38.48 |
| TraesCS4A01G440300.1 | Wheat | plasma membrane | 38.02 | 38.29 |
| TraesCS4A01G440600.1 | Wheat | plasma membrane | 38.02 | 38.29 |
| TraesCS4A01G440500.1 | Wheat | plasma membrane | 37.84 | 38.11 |
| TraesCS7A01G121600.1 | Wheat | plastid | 37.84 | 37.97 |
| KXG21716 | Sorghum | cytosol, peroxisome, plasma membrane | 39.46 | 37.82 |
| TraesCS7B01G020300.1 | Wheat | plasma membrane | 40.54 | 37.82 |
| HORVU5Hr1G047970.5 | Barley | mitochondrion | 40.54 | 37.44 |
| Os05t0338900-00 | Rice | plasma membrane | 13.51 | 36.59 |
| Bra038280.1-P | Field mustard | plasma membrane | 69.37 | 34.47 |
| TraesCS7B01G020200.1 | Wheat | peroxisome, plasma membrane, vacuole | 22.88 | 32.73 |
| AT1G18880.1 | Thale cress | cytosol, peroxisome, plasma membrane | 32.97 | 31.18 |
| AT5G11570.1 | Thale cress | plasma membrane | 25.59 | 29.52 |
| AT1G69870.1 | Thale cress | cytosol, nucleus, plasma membrane | 32.97 | 29.52 |
| AT3G16180.1 | Thale cress | plasma membrane | 31.35 | 29.44 |
| AT1G52190.1 | Thale cress | cytosol, peroxisome, plasma membrane | 31.89 | 29.16 |
| AT1G27080.1 | Thale cress | cytosol, golgi, plasma membrane | 29.73 | 28.65 |
| AT1G68570.1 | Thale cress | cytosol, peroxisome, plasma membrane | 30.63 | 28.52 |
| AT1G69860.1 | Thale cress | plasma membrane | 28.11 | 28.11 |
| AT5G28470.2 | Thale cress | plasma membrane | 27.93 | 27.63 |
| AT5G62680.1 | Thale cress | golgi, peroxisome, vacuole | 30.63 | 27.6 |
| AT3G47960.1 | Thale cress | plasma membrane | 30.45 | 26.57 |
Protein Annotations
| MapMan:24.2.2.9 | EntrezGene:823714 | ProteinID:AEE78063.1 | ArrayExpress:AT3G45720 | EnsemblPlantsGene:AT3G45720 | RefSeq:AT3G45720 |
| TAIR:AT3G45720 | RefSeq:AT3G45720-TAIR-G | EnsemblPlants:AT3G45720.1 | TAIR:AT3G45720.1 | Unigene:At.53769 | ProteinID:CAB75785.1 |
| GO:GO:0003674 | GO:GO:0005215 | GO:GO:0005575 | GO:GO:0006810 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009987 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0022857 | GO:GO:0042128 | GO:GO:0055085 |
| InterPro:IPR020846 | InterPro:MFS_dom | InterPro:MFS_trans_sf | RefSeq:NP_190158.1 | PFAM:PF00854 | PO:PO:0009005 |
| PO:PO:0009047 | InterPro:POT_fam | PANTHER:PTHR11654 | PANTHER:PTHR11654:SF19 | UniProt:Q9M171 | SUPFAM:SSF103473 |
| TMHMM:TMhelix | UniParc:UPI00000487DF | : | : | : | : |
Description
NPF2.1Protein NRT1/ PTR FAMILY 2.1 [Source:UniProtKB/Swiss-Prot;Acc:Q9M171]
Coordinates
chr3:+:16785046..16786945
Molecular Weight (calculated)
61106.6 Da
IEP (calculated)
8.325
GRAVY (calculated)
0.383
Length
555 amino acids
Sequence
(BLAST)
(BLAST)
001: MAGLVLSNDT EAKISGDCKR GGCITFPFMI ATLLGISVTS YGWVLNLIVF LIEEYNIKSI AAAQISNIVN GCLSMLPVVT AILADSFFGN IPVISASAFI
101: SLLGIFLLTL ISSFENLRPR PCETGSILCQ SPSKLHLGVL YAALALVTAG TSGTRVALAS AGANQYDKPR DKGSFFNWYF LTVNTGAIIS ATAIVYTQEN
201: ASWRLGFGLC AAANLISFIV FISGKRFYKH DKPMGSPFTS LIRVLVAAIL KIKVVTSSKE EDYHREVEKE SKTCIGMPSK SFRFLNRAAL KSEKDLNQED
301: GLCHNPWRLC SVEEVEDFKS VLRVLPLWLA ILFVGTSIGV QASMTVLQAL VTDRGLDSKF KVPAGSLQVI VLISSCVFLV LNNWTIYPIY QKITHKQLTP
401: LQQVGIGQVF NILSMAISAI VEAKRLKTVE NEHPMSVLWL LPPLVIVGIG DAFHYMANVA VFYGEFPESM RNTATSVTSV AFGISFYLST ALINLIQRTT
501: AWLPDDINHG RVDNVYWVLV IGGVLNLGYF FVCSWYFTYR KIQDDNRQDP KDVTN
101: SLLGIFLLTL ISSFENLRPR PCETGSILCQ SPSKLHLGVL YAALALVTAG TSGTRVALAS AGANQYDKPR DKGSFFNWYF LTVNTGAIIS ATAIVYTQEN
201: ASWRLGFGLC AAANLISFIV FISGKRFYKH DKPMGSPFTS LIRVLVAAIL KIKVVTSSKE EDYHREVEKE SKTCIGMPSK SFRFLNRAAL KSEKDLNQED
301: GLCHNPWRLC SVEEVEDFKS VLRVLPLWLA ILFVGTSIGV QASMTVLQAL VTDRGLDSKF KVPAGSLQVI VLISSCVFLV LNNWTIYPIY QKITHKQLTP
401: LQQVGIGQVF NILSMAISAI VEAKRLKTVE NEHPMSVLWL LPPLVIVGIG DAFHYMANVA VFYGEFPESM RNTATSVTSV AFGISFYLST ALINLIQRTT
501: AWLPDDINHG RVDNVYWVLV IGGVLNLGYF FVCSWYFTYR KIQDDNRQDP KDVTN
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.