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Thale cress
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • nucleus 1
  • cytosol 1
  • extracellular 1
  • endoplasmic reticulum 1
  • vacuole 1
  • plasma membrane 3
  • golgi 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY11648 Canola plasma membrane 83.6 84.21
Bra016260.1-P Field mustard plasma membrane 83.6 84.21
CDY38766 Canola plasma membrane 83.42 84.03
KRG99182 Soybean plasma membrane 49.37 47.74
GSMUA_Achr4P17590_001 Banana plasma membrane 36.58 45.41
Solyc05g006920.2.1 Tomato cytosol, peroxisome, plasma membrane 47.39 43.33
PGSC0003DMT400045466 Potato cytosol, peroxisome, plasma membrane 47.03 43.07
AT1G27080.1 Thale cress cytosol, golgi, plasma membrane 44.32 42.71
AT1G69870.1 Thale cress cytosol, nucleus, plasma membrane 47.21 42.26
GSMUA_Achr2P12500_001 Banana extracellular, mitochondrion, plasma membrane, plastid 35.32 40.33
Os01t0913300-01 Rice plasma membrane 43.06 39.83
TraesCS3B01G454100.1 Wheat plasma membrane 43.06 39.5
HORVU3Hr1G092870.1 Barley plasma membrane 43.06 39.44
TraesCS3D01G414400.1 Wheat plasma membrane 42.7 39.3
GSMUA_Achr7P01710_001 Banana cytosol, peroxisome, plasma membrane 40.0 39.02
TraesCS3A01G418800.1 Wheat plasma membrane 43.42 38.75
TraesCS3B01G454000.1 Wheat plasma membrane 40.9 37.27
TraesCS3D01G414300.1 Wheat plasma membrane 40.54 37.07
TraesCS3A01G418700.1 Wheat plasma membrane 40.36 36.9
AT1G18880.1 Thale cress cytosol, peroxisome, plasma membrane 38.02 35.95
AT5G62680.1 Thale cress golgi, peroxisome, vacuole 37.84 34.09
AT3G47960.1 Thale cress plasma membrane 38.38 33.49
AT5G28470.2 Thale cress plasma membrane 33.69 33.33
KXG37624 Sorghum plasma membrane 34.41 31.57
AT1G68570.1 Thale cress cytosol, peroxisome, plasma membrane 33.15 30.87
EES13016 Sorghum cytosol, nucleus, plasma membrane 35.5 30.83
AT5G11570.1 Thale cress plasma membrane 26.67 30.77
Os04t0660900-01 Rice plasma membrane, plastid 34.41 30.27
AT3G16180.1 Thale cress plasma membrane 31.89 29.95
Zm00001d001976_P001 Maize plastid 35.5 29.4
AT1G52190.1 Thale cress cytosol, peroxisome, plasma membrane 31.89 29.16
AT3G45690.1 Thale cress plasma membrane 26.49 28.49
AT3G45650.2 Thale cress plasma membrane 29.91 28.42
AT3G45720.1 Thale cress plasma membrane 28.11 28.11
AT3G45660.2 Thale cress plasma membrane 29.19 28.03
AT3G45680.1 Thale cress plasma membrane 27.57 27.42
AT3G45700.1 Thale cress plasma membrane 25.95 26.28
AT3G45710.1 Thale cress plasma membrane 26.13 25.89
Protein Annotations
Gene3D:1.20.1250.20MapMan:24.2.2.9EntrezGene:843322ProteinID:AAG52569.1ProteinID:AEE34992.1ArrayExpress:AT1G69860
EnsemblPlantsGene:AT1G69860RefSeq:AT1G69860TAIR:AT1G69860RefSeq:AT1G69860-TAIR-GEnsemblPlants:AT1G69860.1TAIR:AT1G69860.1
Unigene:At.52455GO:GO:0003674GO:GO:0005215GO:GO:0005575GO:GO:0006810GO:GO:0008150
GO:GO:0016020GO:GO:0016021GO:GO:0022857GO:GO:0055085InterPro:MFS_trans_sfRefSeq:NP_177144.1
PFAM:PF00854InterPro:POT_famPANTHER:PTHR11654PANTHER:PTHR11654:SF20UniProt:Q9CAR9SUPFAM:SSF103473
TMHMM:TMhelixUniParc:UPI0000048436SEG:seg:::
Description
NPF2.14Putative protein NRT1/ PTR FAMILY 2.14 [Source:UniProtKB/Swiss-Prot;Acc:Q9CAR9]
Coordinates
chr1:+:26309628..26312174
Molecular Weight (calculated)
62583.2 Da
IEP (calculated)
8.810
GRAVY (calculated)
0.250
Length
555 amino acids
Sequence
(BLAST)
001: MDNEKGTSSS DLTTRQRKPL GWKAMPYIIG NETLERLATF GLMANFMVYM VREYHMDQVQ AVTLINTWSA LTNFAPIIGA FISDSYTGKF NTIVFGSIAE
101: LLGMLVLTFT SLVPNLRPPP CTADQITGQC IPYSYSQLYV LLSGLFLLSV GTGGIRSCSV PFSLDQFDDS TEEGREGSRS FFSWYYTTHT IVQLVSMTLV
201: LYVQNNISWG IGFAIPTVLN FFALLLLFVG TRYYVFVKPE GSVFSGVFKV LVAAYKKRKA RFTSGIDYHQ PLLETDLQSN KLVLTDQFRF LNKAVIVMNN
301: DEAGNEEWRT CTVRQIEDIK SIISIIPIFA SSIIGFLAMN QQQTFTVSQA LKMDLQFPGT SYLIPPASIT VISLLNIGIW LPFYETVLVR HIENITKQNG
401: GISLLQKVGI GNIFSISTML ISGIVERKRR DLSLNGVKMS VFWLTPQQVL MGFYQVFTIV GLTEFFNKQV PINMRSIGNS LLYLGLSLAS YLSSAMVSIV
501: HSVTARGGQS WLTDDIDKSK LDCFYYFIAA LSTLNFIFFF WCARRYRYRN YSNEQ
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.