Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 1
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 3
- golgi 1
Predictors | GFP | MS/MS | Papers | ||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
CDY11648 | Canola | plasma membrane | 83.6 | 84.21 |
Bra016260.1-P | Field mustard | plasma membrane | 83.6 | 84.21 |
CDY38766 | Canola | plasma membrane | 83.42 | 84.03 |
KRG99182 | Soybean | plasma membrane | 49.37 | 47.74 |
GSMUA_Achr4P17590_001 | Banana | plasma membrane | 36.58 | 45.41 |
Solyc05g006920.2.1 | Tomato | cytosol, peroxisome, plasma membrane | 47.39 | 43.33 |
PGSC0003DMT400045466 | Potato | cytosol, peroxisome, plasma membrane | 47.03 | 43.07 |
AT1G27080.1 | Thale cress | cytosol, golgi, plasma membrane | 44.32 | 42.71 |
AT1G69870.1 | Thale cress | cytosol, nucleus, plasma membrane | 47.21 | 42.26 |
GSMUA_Achr2P12500_001 | Banana | extracellular, mitochondrion, plasma membrane, plastid | 35.32 | 40.33 |
Os01t0913300-01 | Rice | plasma membrane | 43.06 | 39.83 |
TraesCS3B01G454100.1 | Wheat | plasma membrane | 43.06 | 39.5 |
HORVU3Hr1G092870.1 | Barley | plasma membrane | 43.06 | 39.44 |
TraesCS3D01G414400.1 | Wheat | plasma membrane | 42.7 | 39.3 |
GSMUA_Achr7P01710_001 | Banana | cytosol, peroxisome, plasma membrane | 40.0 | 39.02 |
TraesCS3A01G418800.1 | Wheat | plasma membrane | 43.42 | 38.75 |
TraesCS3B01G454000.1 | Wheat | plasma membrane | 40.9 | 37.27 |
TraesCS3D01G414300.1 | Wheat | plasma membrane | 40.54 | 37.07 |
TraesCS3A01G418700.1 | Wheat | plasma membrane | 40.36 | 36.9 |
AT1G18880.1 | Thale cress | cytosol, peroxisome, plasma membrane | 38.02 | 35.95 |
AT5G62680.1 | Thale cress | golgi, peroxisome, vacuole | 37.84 | 34.09 |
AT3G47960.1 | Thale cress | plasma membrane | 38.38 | 33.49 |
AT5G28470.2 | Thale cress | plasma membrane | 33.69 | 33.33 |
KXG37624 | Sorghum | plasma membrane | 34.41 | 31.57 |
AT1G68570.1 | Thale cress | cytosol, peroxisome, plasma membrane | 33.15 | 30.87 |
EES13016 | Sorghum | cytosol, nucleus, plasma membrane | 35.5 | 30.83 |
AT5G11570.1 | Thale cress | plasma membrane | 26.67 | 30.77 |
Os04t0660900-01 | Rice | plasma membrane, plastid | 34.41 | 30.27 |
AT3G16180.1 | Thale cress | plasma membrane | 31.89 | 29.95 |
Zm00001d001976_P001 | Maize | plastid | 35.5 | 29.4 |
AT1G52190.1 | Thale cress | cytosol, peroxisome, plasma membrane | 31.89 | 29.16 |
AT3G45690.1 | Thale cress | plasma membrane | 26.49 | 28.49 |
AT3G45650.2 | Thale cress | plasma membrane | 29.91 | 28.42 |
AT3G45720.1 | Thale cress | plasma membrane | 28.11 | 28.11 |
AT3G45660.2 | Thale cress | plasma membrane | 29.19 | 28.03 |
AT3G45680.1 | Thale cress | plasma membrane | 27.57 | 27.42 |
AT3G45700.1 | Thale cress | plasma membrane | 25.95 | 26.28 |
AT3G45710.1 | Thale cress | plasma membrane | 26.13 | 25.89 |
Protein Annotations
Gene3D:1.20.1250.20 | MapMan:24.2.2.9 | EntrezGene:843322 | ProteinID:AAG52569.1 | ProteinID:AEE34992.1 | ArrayExpress:AT1G69860 |
EnsemblPlantsGene:AT1G69860 | RefSeq:AT1G69860 | TAIR:AT1G69860 | RefSeq:AT1G69860-TAIR-G | EnsemblPlants:AT1G69860.1 | TAIR:AT1G69860.1 |
Unigene:At.52455 | GO:GO:0003674 | GO:GO:0005215 | GO:GO:0005575 | GO:GO:0006810 | GO:GO:0008150 |
GO:GO:0016020 | GO:GO:0016021 | GO:GO:0022857 | GO:GO:0055085 | InterPro:MFS_trans_sf | RefSeq:NP_177144.1 |
PFAM:PF00854 | InterPro:POT_fam | PANTHER:PTHR11654 | PANTHER:PTHR11654:SF20 | UniProt:Q9CAR9 | SUPFAM:SSF103473 |
TMHMM:TMhelix | UniParc:UPI0000048436 | SEG:seg | : | : | : |
Description
NPF2.14Putative protein NRT1/ PTR FAMILY 2.14 [Source:UniProtKB/Swiss-Prot;Acc:Q9CAR9]
Coordinates
chr1:+:26309628..26312174
Molecular Weight (calculated)
62583.2 Da
IEP (calculated)
8.810
GRAVY (calculated)
0.250
Length
555 amino acids
Sequence
(BLAST)
(BLAST)
001: MDNEKGTSSS DLTTRQRKPL GWKAMPYIIG NETLERLATF GLMANFMVYM VREYHMDQVQ AVTLINTWSA LTNFAPIIGA FISDSYTGKF NTIVFGSIAE
101: LLGMLVLTFT SLVPNLRPPP CTADQITGQC IPYSYSQLYV LLSGLFLLSV GTGGIRSCSV PFSLDQFDDS TEEGREGSRS FFSWYYTTHT IVQLVSMTLV
201: LYVQNNISWG IGFAIPTVLN FFALLLLFVG TRYYVFVKPE GSVFSGVFKV LVAAYKKRKA RFTSGIDYHQ PLLETDLQSN KLVLTDQFRF LNKAVIVMNN
301: DEAGNEEWRT CTVRQIEDIK SIISIIPIFA SSIIGFLAMN QQQTFTVSQA LKMDLQFPGT SYLIPPASIT VISLLNIGIW LPFYETVLVR HIENITKQNG
401: GISLLQKVGI GNIFSISTML ISGIVERKRR DLSLNGVKMS VFWLTPQQVL MGFYQVFTIV GLTEFFNKQV PINMRSIGNS LLYLGLSLAS YLSSAMVSIV
501: HSVTARGGQS WLTDDIDKSK LDCFYYFIAA LSTLNFIFFF WCARRYRYRN YSNEQ
101: LLGMLVLTFT SLVPNLRPPP CTADQITGQC IPYSYSQLYV LLSGLFLLSV GTGGIRSCSV PFSLDQFDDS TEEGREGSRS FFSWYYTTHT IVQLVSMTLV
201: LYVQNNISWG IGFAIPTVLN FFALLLLFVG TRYYVFVKPE GSVFSGVFKV LVAAYKKRKA RFTSGIDYHQ PLLETDLQSN KLVLTDQFRF LNKAVIVMNN
301: DEAGNEEWRT CTVRQIEDIK SIISIIPIFA SSIIGFLAMN QQQTFTVSQA LKMDLQFPGT SYLIPPASIT VISLLNIGIW LPFYETVLVR HIENITKQNG
401: GISLLQKVGI GNIFSISTML ISGIVERKRR DLSLNGVKMS VFWLTPQQVL MGFYQVFTIV GLTEFFNKQV PINMRSIGNS LLYLGLSLAS YLSSAMVSIV
501: HSVTARGGQS WLTDDIDKSK LDCFYYFIAA LSTLNFIFFF WCARRYRYRN YSNEQ
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.