Factsheet for HORVU3Hr1G092870.1

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

nucleus 1
cytosol 1
vacuole 2
extracellular 1
endoplasmic reticulum 1
plasma membrane 3
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	cytosol, nucleus, secretory
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	vacuole
PProwler:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3B01G454100.1	Wheat	plasma membrane	96.37	96.53
TraesCS3D01G414400.1	Wheat	plasma membrane	95.21	95.69
TraesCS3A01G418800.1	Wheat	plasma membrane	96.37	93.89
Os01t0913300-01	Rice	plasma membrane	79.87	80.67
GSMUA_Achr7P01710_001	Banana	cytosol, peroxisome, plasma membrane	51.65	55.01
GSMUA_Achr2P12500_001	Banana	extracellular, mitochondrion, plasma membrane, plastid	43.4	54.12
GSMUA_Achr4P17590_001	Banana	plasma membrane	39.6	53.69
VIT_01s0026g01490.t01	Wine grape	plastid	50.0	48.95
AT1G27080.1	Thale cress	cytosol, golgi, plasma membrane	44.88	47.22
CDY25813	Canola	cytosol, peroxisome, plasma membrane	44.22	47.18
CDY28441	Canola	cytosol, peroxisome, plasma membrane	44.22	47.18
CDY40280	Canola	plasma membrane	44.22	47.18
KRH69380	Soybean	plastid	48.84	47.06
PGSC0003DMT400045466	Potato	cytosol, peroxisome, plasma membrane	47.03	47.03
Bra012429.1-P	Field mustard	cytosol, peroxisome, plasma membrane	44.06	47.01
Solyc05g006920.2.1	Tomato	cytosol, peroxisome, plasma membrane	47.03	46.95
KRH74756	Soybean	plastid	48.02	46.94
Bra007886.1-P	Field mustard	cytosol, peroxisome, plasma membrane	45.21	46.36
CDY56086	Canola	cytosol, peroxisome, plasma membrane	45.05	46.19
KRG99183	Soybean	cytosol, peroxisome, plasma membrane, plastid	47.36	46.14
CDY53067	Canola	cytosol, peroxisome, plasma membrane	45.21	46.13
CDY48389	Canola	cytosol, peroxisome, plasma membrane	44.72	44.65
CDY11647	Canola	plastid	45.21	44.26
CDY38767	Canola	plastid	45.38	44.21
Bra016259.1-P	Field mustard	plastid	45.38	44.21
AT1G69870.1	Thale cress	cytosol, nucleus, plasma membrane	45.21	44.19
CDY23545	Canola	cytosol, peroxisome, plasma membrane	44.22	44.15
KRG99182	Soybean	plasma membrane	41.75	44.08
CDY38766	Canola	plasma membrane	39.77	43.74
Bra016260.1-P	Field mustard	plasma membrane	39.6	43.56
HORVU4Hr1G004460.1	Barley	cytosol, peroxisome, plasma membrane	43.07	43.43
CDY11648	Canola	plasma membrane	39.44	43.38
AT1G69860.1	Thale cress	plasma membrane	39.44	43.06
Bra003979.1-P	Field mustard	cytosol, peroxisome, plasma membrane	22.61	39.83
HORVU5Hr1G000800.3	Barley	cytosol, peroxisome, plasma membrane	39.6	39.74
HORVU7Hr1G018540.1	Barley	cytosol, nucleus, plasma membrane	39.77	39.25
HORVU1Hr1G063420.2	Barley	cytosol, nucleus, plasma membrane	35.31	35.49
HORVU2Hr1G006820.2	Barley	golgi, plasma membrane	39.6	34.99
HORVU7Hr1G042120.1	Barley	cytosol	34.98	34.36
HORVU1Hr1G063460.2	Barley	plasma membrane	33.5	34.35
HORVU1Hr1G063470.10	Barley	peroxisome	33.17	33.44
HORVU3Hr1G073580.1	Barley	plasma membrane	33.5	32.38
HORVU3Hr1G073520.3	Barley	cytosol	22.94	31.31
HORVU7Hr1G025670.1	Barley	plasma membrane	28.88	30.86
HORVU5Hr1G047970.5	Barley	mitochondrion	30.53	30.78
HORVU7Hr1G025680.3	Barley	plasma membrane	28.38	30.18

Protein Annotations

EnsemblPlants:HORVU3Hr1G092870.1	EnsemblPlantsGene:HORVU3Hr1G092870	GO:GO:0003674	GO:GO:0005215	GO:GO:0005575	GO:GO:0006810
GO:GO:0008150	GO:GO:0016020	GO:GO:0022857	GO:GO:0055085	InterPro:IPR020846	InterPro:MFS_dom
InterPro:MFS_trans_sf	InterPro:POT_fam	PANTHER:PTHR11654	PANTHER:PTHR11654:SF20	PFAM:PF00854	SEG:seg
SUPFAM:SSF103473	TMHMM:TMhelix	UniParc:UPI000294B8F8	UniProt:M0XBE6	MapMan:24.2.2.9	:

Description

No Description!

Coordinates

chrchr3H:+:640428108..640432076

Molecular Weight (calculated)

66524.6 Da

IEP (calculated)

8.860

GRAVY (calculated)

0.314

Length

606 amino acids

Sequence
(BLAST)

001: MAAPAAEVEM GGGEGLPEGD AGGGGARRRR PLGWRCMPFI IATETFEKVG SVGVAANLTV YLVKRYNIGQ LAAANITNIF YGTLNFAPLL GAFISDAYLG
101: RFRTLAYGSF FSLLGMLGLT LSASVPALKP PGCSPTARLG GHCNSPSTLQ LSVLYLSLAF LTIGGGAIRP CSLPFGVDQF DMTDEKSRKG LNSYYNWYYG
201: TTTAALVFSM TILIYIQNSI SWPIGFGIPT FFMLMSIIIL FMGTRLYVHV PPEGSIFTGI AQVLVASFKK RRLKLPHPDN INQQELLLFS PPIGGRRIFR
301: LPLTSQFRFL NKGAIVRDGD INDDGSARNS WELCSIQQIE EVKCLLRIVP ICISGIICFV ALAQQFTYII LQTLTMDCHL GTHFEIPAGS VISISLIALT
401: AFLPIYDRIL VPIARRFTRV ESGITLLQRQ GIGLVISPIS MVVAGLVEQK RRNSALSNGG KSPMSVLWLA PQLILMGIAE AFNAVGQIEF YNKQFPEQML
501: TLAGSLFFVT LAGANYLSTA LANITRKVTT RDGHTSWLTD DINLGKLDYF FYFIALIGVL NLFYFLICSH YYQYKSMSLH AEESIKVRTK EEAEAEVDAN
601: TDAPKK

Best Arabidopsis Sequence Match ( AT1G69870.1 )
(BLAST)

001: MVLEDRKDGS SLPGRSGSFS KSSPSELDVV DPYKRISSPG SILDAEKVEK KPGGWRAVSF ILGNETLERL GSIGLLANFM VYLTKVFHLE QVDAANVINI
101: WSGFTNLTPL VGAYISDTYV GRFKTIAFAS FATLLGLITI TLTASFPQLH PASCNSQDPL SCGGPNKLQI GVLLLGLCFL SVGSGGIRPC SIPFGVDQFD
201: QRTEEGVKGV ASFFNWYYMT FTVVLIITQT VVVYIQDQVS WIIGFSIPTG LMALAVVMFF AGMKRYVYVK PEGSIFSGIA QVIVAARKKR KLKLPAEDDG
301: TVTYYDPAIK SSVLSKLHRS NQFRCLDKAA VVIEGDLTPE GPPADKWRLC SVQEVEEVKC LIRIVPIWSA GIISLAAMTT QGTFTVSQAL KMDRNLGPKF
401: EIPAGSLSVI SLLTIGIFLP FYDRVFVPFM RRITGHKSGI TLLQRIGTGI VFAIFSMIVA GIVERMRRIR SINAGDPTGM TPMSVFWLSP QLILMGLCEA
501: FNIIGQIEFF NSQFPEHMRS IANSLFSLSF AGSSYLSSFL VTVVHKFSGG HDRPDWLNKN LNAGKLDYFY YLIAVLGVVN LVYFWYCARG YRYKVGLPIE
601: DFEEDKSSDD VEMTSKKSMK

Arabidopsis Description

NPF2.13Protein NRT1/ PTR FAMILY 2.13 [Source:UniProtKB/Swiss-Prot;Acc:Q8RX77]
SUBAcon: [plasma membrane,nucleus,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.