Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- nucleus 1
- golgi 2
- vacuole 2
- extracellular 1
- endoplasmic reticulum 1
- plasma membrane 3
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400040282 | Potato | plasma membrane | 93.44 | 93.44 |
| Solyc05g005950.2.1 | Tomato | plasma membrane | 76.68 | 77.08 |
| Solyc05g005970.2.1 | Tomato | plasma membrane | 77.2 | 77.07 |
| Solyc05g005940.2.1 | Tomato | plasma membrane | 75.99 | 75.99 |
| Solyc05g005920.2.1 | Tomato | plasma membrane | 76.17 | 75.64 |
| Solyc05g005960.2.1 | Tomato | plasma membrane | 74.27 | 74.65 |
| Solyc04g005070.2.1 | Tomato | plasma membrane | 60.79 | 61.43 |
| Solyc05g005910.2.1 | Tomato | plasma membrane | 79.79 | 61.19 |
| Solyc05g005990.2.1 | Tomato | plasma membrane | 45.25 | 57.08 |
| Solyc05g006010.2.1 | Tomato | plasma membrane | 57.34 | 56.75 |
| Solyc05g006000.2.1 | Tomato | plasma membrane | 57.34 | 56.66 |
| Solyc08g066940.2.1 | Tomato | plasma membrane | 47.15 | 53.22 |
| VIT_11s0016g03600.t01 | Wine grape | plasma membrane | 52.16 | 51.8 |
| KRH04819 | Soybean | plasma membrane | 49.74 | 49.91 |
| KRH16178 | Soybean | plasma membrane | 48.7 | 48.21 |
| Solyc12g007220.1.1 | Tomato | cytosol, peroxisome, plasma membrane | 46.63 | 46.08 |
| Solyc03g120560.2.1 | Tomato | plasma membrane | 45.6 | 43.78 |
| KRH04899 | Soybean | cytosol, peroxisome, plasma membrane | 40.41 | 42.55 |
| Solyc12g044310.1.1 | Tomato | plasma membrane | 45.77 | 42.13 |
| Solyc03g120550.2.1 | Tomato | plasma membrane | 46.46 | 42.03 |
| Solyc12g095810.1.1 | Tomato | plasma membrane | 40.93 | 36.07 |
| Solyc03g113430.2.1 | Tomato | plasma membrane | 35.75 | 35.38 |
| Solyc06g071570.2.1 | Tomato | plasma membrane | 34.37 | 34.43 |
| Solyc05g006920.2.1 | Tomato | cytosol, peroxisome, plasma membrane | 35.92 | 34.27 |
| Solyc03g113420.2.1 | Tomato | plasma membrane | 34.72 | 34.24 |
| Solyc05g009500.2.1 | Tomato | plasma membrane | 33.85 | 34.21 |
| Solyc11g072570.1.1 | Tomato | plasma membrane | 32.3 | 33.45 |
| Solyc06g075500.2.1 | Tomato | plasma membrane | 30.74 | 32.78 |
| Solyc06g071090.1.1 | Tomato | endoplasmic reticulum, plasma membrane | 17.1 | 32.67 |
| Solyc06g075440.1.1 | Tomato | plasma membrane | 29.53 | 32.2 |
| Solyc06g075480.2.1 | Tomato | plasma membrane | 30.22 | 31.59 |
| Solyc11g072560.1.1 | Tomato | plasma membrane | 27.98 | 31.52 |
| Solyc06g075490.1.1 | Tomato | plasma membrane | 29.36 | 30.97 |
| Solyc06g075450.1.1 | Tomato | extracellular, plasma membrane, vacuole | 29.02 | 30.77 |
| Solyc03g113440.2.1 | Tomato | plasma membrane | 31.61 | 30.7 |
| Solyc06g005070.1.1 | Tomato | endoplasmic reticulum, plasma membrane, plastid | 16.06 | 29.52 |
| Solyc11g072580.1.1 | Tomato | plasma membrane | 27.98 | 29.51 |
| VIT_04s0008g03580.t01 | Wine grape | plasma membrane | 54.92 | 26.93 |
Protein Annotations
| Gene3D:1.20.1250.20 | MapMan:24.2.2.9 | GO:GO:0003674 | GO:GO:0005215 | GO:GO:0005575 | GO:GO:0006810 |
| GO:GO:0008150 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0022857 | GO:GO:0055085 | InterPro:IPR020846 |
| UniProt:K4BWC5 | InterPro:MFS_dom | InterPro:MFS_trans_sf | PFAM:PF00854 | InterPro:POT_fam | PANTHER:PTHR11654 |
| PANTHER:PTHR11654:SF150 | SUPFAM:SSF103473 | EnsemblPlantsGene:Solyc05g005980.2 | EnsemblPlants:Solyc05g005980.2.1 | TMHMM:TMhelix | UniParc:UPI00027671C0 |
Description
No Description!
Coordinates
chr5:-:729342..731896
Molecular Weight (calculated)
64191.4 Da
IEP (calculated)
7.689
GRAVY (calculated)
0.317
Length
579 amino acids
Sequence
(BLAST)
(BLAST)
001: MDKETQLIGE NPRKGGLRTM PFIIVNESFE RVASYGLQAN LIIYLMTYYK MTAAAGTSIL GIWTALSNGL AIVGAIISDS YCGRFKAVAF GSISTLIGMI
101: ILWLTSMIPQ LKSLPCPQFQ HVCNGTTAVQ LAVLFSSFGF MSVGAGFIRP CSIMFGADQL EKKGKPENKK LVDSYFNWYY ASIGVSTILA VTTVVYIQER
201: FGWKIGLGIP VVLMFLSVSM FLIGSPWYIK VKAKESLLIG LLQAAVAAFK KRNTHHALTD SDNYYRSPLE SEVLTPSNDF RCLNKACMIE DPQRDLNPDG
301: SASNPWNLCS LEQVESLKAI VRVLPMWSTG FMIYVTMNQF SFSVLQAKTM DRHVIPQFEL PAASFSVFLI IALTIWVTFY DRVLVPLLSK YTGRPRGLSP
401: VTRMGIGLLV SCMSMALSAI TESIRQKKAI EEGHEDDPHA LVNMSAMWLV PQYLLLGVAE AAHAVGQIEF FYSLFPKSMA SIASAMYTIG TAVSSLFGSI
501: LVSGVDWLTS TGGKTSWLSS NINKGHLDYY FWLLAFLSLL NFFYFVMVCR LYETGNDGSS RLSHVADEEE CDYRLLSES
101: ILWLTSMIPQ LKSLPCPQFQ HVCNGTTAVQ LAVLFSSFGF MSVGAGFIRP CSIMFGADQL EKKGKPENKK LVDSYFNWYY ASIGVSTILA VTTVVYIQER
201: FGWKIGLGIP VVLMFLSVSM FLIGSPWYIK VKAKESLLIG LLQAAVAAFK KRNTHHALTD SDNYYRSPLE SEVLTPSNDF RCLNKACMIE DPQRDLNPDG
301: SASNPWNLCS LEQVESLKAI VRVLPMWSTG FMIYVTMNQF SFSVLQAKTM DRHVIPQFEL PAASFSVFLI IALTIWVTFY DRVLVPLLSK YTGRPRGLSP
401: VTRMGIGLLV SCMSMALSAI TESIRQKKAI EEGHEDDPHA LVNMSAMWLV PQYLLLGVAE AAHAVGQIEF FYSLFPKSMA SIASAMYTIG TAVSSLFGSI
501: LVSGVDWLTS TGGKTSWLSS NINKGHLDYY FWLLAFLSLL NFFYFVMVCR LYETGNDGSS RLSHVADEEE CDYRLLSES
001: MENPPNETEA KQIQTNEGKK TKGGIITMPF IIANEAFEKV ASYGLLPNMI MYLIRDYRFG VAKGTNVLFM WSAASNFTPL LGAFLSDSYL GRFLTISIAS
101: LSSFLGMVLL WLTAMLPQVK PSPCDPTAAG SHCGSSTASQ LALLYSAFAL ISIGSGGIRP CSLAFGADQL DNKENPKNER VLESFFGWYY ASSAVAVLIA
201: FTGIVYIQEH LGWKIGFGVP AVLMLIAALL FILASPLYVT RGVTKSLFTG LAQAIVAAYK KRKLSLPDHH DSFDCYYHMK DSEIKAPSQK LRFLNKACLI
301: SNREEEIGSD GFALNPWRLC TTDKVEELKA LIKVIPIWST GIMMSINTSQ SSFQLLQATS MDRRLSRHGS SFQVPAGSFG MFTIIALALW VILYDRAVIP
401: LASKIRGRPF RLSVKLRMGL GLFMSFLAMA ISAMVESFRR KKAISQGYAN NSNAVVDISA MWLVPQYVLH GLAEALTAIG QTEFFYTEFP KSMSSIAASL
501: FGLGMAVASL LASVVLNAVN ELTSRNGKES WVSDNINKGH YNYYYWVLAI MSFINVIYYV ICSWSYGPLV DQVRNGRVNG VREEEELIDI VGKGFEKEDL
601: SPVVKTN
101: LSSFLGMVLL WLTAMLPQVK PSPCDPTAAG SHCGSSTASQ LALLYSAFAL ISIGSGGIRP CSLAFGADQL DNKENPKNER VLESFFGWYY ASSAVAVLIA
201: FTGIVYIQEH LGWKIGFGVP AVLMLIAALL FILASPLYVT RGVTKSLFTG LAQAIVAAYK KRKLSLPDHH DSFDCYYHMK DSEIKAPSQK LRFLNKACLI
301: SNREEEIGSD GFALNPWRLC TTDKVEELKA LIKVIPIWST GIMMSINTSQ SSFQLLQATS MDRRLSRHGS SFQVPAGSFG MFTIIALALW VILYDRAVIP
401: LASKIRGRPF RLSVKLRMGL GLFMSFLAMA ISAMVESFRR KKAISQGYAN NSNAVVDISA MWLVPQYVLH GLAEALTAIG QTEFFYTEFP KSMSSIAASL
501: FGLGMAVASL LASVVLNAVN ELTSRNGKES WVSDNINKGH YNYYYWVLAI MSFINVIYYV ICSWSYGPLV DQVRNGRVNG VREEEELIDI VGKGFEKEDL
601: SPVVKTN
Arabidopsis Description
NPF1.2Protein NRT1/ PTR FAMILY 1.2 [Source:UniProtKB/Swiss-Prot;Acc:Q9M817]
SUBAcon: [peroxisome,cytosol,plasma membrane]
SUBAcon: [peroxisome,cytosol,plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.