Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- extracellular 4
- endoplasmic reticulum 4
- vacuole 4
- plasma membrane 7
- golgi 4
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| OQU80662 | Sorghum | plasma membrane | 87.67 | 85.5 |
| Zm00001d031213_P001 | Maize | plasma membrane | 31.51 | 31.63 |
| Zm00001d043375_P001 | Maize | plasma membrane | 39.33 | 31.46 |
| Zm00001d043374_P001 | Maize | plasma membrane | 36.4 | 31.37 |
| Zm00001d038185_P001 | Maize | plasma membrane | 31.12 | 30.29 |
| Zm00001d038180_P001 | Maize | endoplasmic reticulum, plasma membrane, vacuole | 18.2 | 29.62 |
| Zm00001d013529_P002 | Maize | plasma membrane | 32.29 | 27.92 |
| Zm00001d033528_P003 | Maize | cytosol, peroxisome, plasma membrane | 32.09 | 27.84 |
| Zm00001d038181_P001 | Maize | plasma membrane | 30.92 | 26.25 |
| Zm00001d045667_P001 | Maize | cytosol, nucleus, peroxisome | 28.96 | 24.92 |
| Zm00001d038186_P002 | Maize | cytosol, peroxisome, plasma membrane | 27.4 | 23.45 |
| Zm00001d038179_P001 | Maize | cytosol, nucleus, plasma membrane | 13.11 | 22.11 |
| Zm00001d001976_P001 | Maize | plastid | 28.96 | 22.09 |
Protein Annotations
| MapMan:24.2.2.9 | UniProt:A0A1D6Q1Q8 | ProteinID:AQK52549.1 | ncoils:Coil | GO:GO:0003674 | GO:GO:0005215 |
| GO:GO:0005575 | GO:GO:0006810 | GO:GO:0008150 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0022857 |
| GO:GO:0055085 | InterPro:IPR020846 | InterPro:MFS_dom | InterPro:MFS_trans_sf | PFAM:PF00854 | InterPro:POT_fam |
| PANTHER:PTHR11654 | PANTHER:PTHR11654:SF150 | SUPFAM:SSF103473 | TMHMM:TMhelix | UniParc:UPI0008DB343E | EnsemblPlantsGene:Zm00001d050456 |
| EnsemblPlants:Zm00001d050456_P001 | EnsemblPlants:Zm00001d050456_T001 | SEG:seg | : | : | : |
Description
Protein NRT1/ PTR FAMILY 1.2
Coordinates
chr4:+:89800374..89802252
Molecular Weight (calculated)
55716.4 Da
IEP (calculated)
7.801
GRAVY (calculated)
0.525
Length
511 amino acids
Sequence
(BLAST)
(BLAST)
001: MGSAESAMVL FIYQAATNFL PIFGAIVSDA LLGRFLTISL TLFACTIGAV LLWLTTVVPT LVAEDCSNED QSCHSPTTLQ FFVLLTSLLF LSIGASGVRP
101: CSLPFGVDQF THWSGAPKDR ALKVLFGWYY VSMGGSAIIS ITLIVYLQDK LGWKIGFAIS MVIAAFAAIL NIVTSPLYIK VKPQKSTWIS LVQVVFIAIR
201: NRHIQLPKAA GENDLHYCNV GGLAMVPSSK MRFLNRACVL RAHVESSNTE VLNSWSVCTV EQVEDIKRVL SVIPMWSATI TSLLIQTASF RVLQAETMDR
301: HVGSTRFQMP AGSVAIFEGI TFTLVSGCIT GREKTLSHKQ KMGIGVLFSI ACALSASVVE AIRRKQATRQ GLENNTDDGG VVNMSVLWLA PQCVFAGLIS
401: AFGSIGQIEF YYEVLPKSMS SLALALLPLA IGVANIASTV VVKLVKVITC SGGRVGWLLD NLNQGHYDYF YFVLAMLGIA GFIYFVACCY WFEEPSPNQL
501: VQSNEDEPNM R
101: CSLPFGVDQF THWSGAPKDR ALKVLFGWYY VSMGGSAIIS ITLIVYLQDK LGWKIGFAIS MVIAAFAAIL NIVTSPLYIK VKPQKSTWIS LVQVVFIAIR
201: NRHIQLPKAA GENDLHYCNV GGLAMVPSSK MRFLNRACVL RAHVESSNTE VLNSWSVCTV EQVEDIKRVL SVIPMWSATI TSLLIQTASF RVLQAETMDR
301: HVGSTRFQMP AGSVAIFEGI TFTLVSGCIT GREKTLSHKQ KMGIGVLFSI ACALSASVVE AIRRKQATRQ GLENNTDDGG VVNMSVLWLA PQCVFAGLIS
401: AFGSIGQIEF YYEVLPKSMS SLALALLPLA IGVANIASTV VVKLVKVITC SGGRVGWLLD NLNQGHYDYF YFVLAMLGIA GFIYFVACCY WFEEPSPNQL
501: VQSNEDEPNM R
001: MGVVENRKIL PEKKLGGWRA ITFILGNETL EKLGSIGVSA NFMLYLRNVF HMEPVEAFNV YYLWMGLTNF APLLGALISD AYIGRFKTIA YASLFSILGL
101: MTVTLTACLP QLHPPPCNNP HPDECDDPNK LQLGILFLGL GFLSIGSGGI RPCSIPFGVD QFDQRTEQGL KGVASFFNWY YLTLTMVLIF SHTVVVYLQT
201: VSWVIGFSIP TSLMACAVVL FFVGMRFYVY VKPEGSVFSG IARVIVAARK KRDLKISLVD DGTEEYYEPP VKPGVLSKLP LTDQFKFLDK AAVILDGDLT
301: SEGVPANKWR LCSIQEVEEV KCLIRVVPVW SAGIISIVAM TTQATFMVFQ ATKMDRHMGP HFEIPAASIT VISYITIGIW VPIYEHLLVP FLWRMRKFRV
401: TLLQRMGIGI VFAILSMFTA GFVEGVRRTR ATEMTQMSVF WLALPLILMG LCESFNFIGL IEFFNSQFPE HMRSIANSLF PLSFAAANYL SSLLVTTVHK
501: VSGTKDHPDW LNKDLDRGKL DYFYYLIAVL GVVNLVYFWY CAHRYQYKAG SQIEDFNEEK SLLDIEPNQR HDQSPS
101: MTVTLTACLP QLHPPPCNNP HPDECDDPNK LQLGILFLGL GFLSIGSGGI RPCSIPFGVD QFDQRTEQGL KGVASFFNWY YLTLTMVLIF SHTVVVYLQT
201: VSWVIGFSIP TSLMACAVVL FFVGMRFYVY VKPEGSVFSG IARVIVAARK KRDLKISLVD DGTEEYYEPP VKPGVLSKLP LTDQFKFLDK AAVILDGDLT
301: SEGVPANKWR LCSIQEVEEV KCLIRVVPVW SAGIISIVAM TTQATFMVFQ ATKMDRHMGP HFEIPAASIT VISYITIGIW VPIYEHLLVP FLWRMRKFRV
401: TLLQRMGIGI VFAILSMFTA GFVEGVRRTR ATEMTQMSVF WLALPLILMG LCESFNFIGL IEFFNSQFPE HMRSIANSLF PLSFAAANYL SSLLVTTVHK
501: VSGTKDHPDW LNKDLDRGKL DYFYYLIAVL GVVNLVYFWY CAHRYQYKAG SQIEDFNEEK SLLDIEPNQR HDQSPS
Arabidopsis Description
NPF2.12Protein NRT1/ PTR FAMILY 2.12 [Source:UniProtKB/Swiss-Prot;Acc:Q9LFX9]
SUBAcon: [plasma membrane,golgi,cytosol]
SUBAcon: [plasma membrane,golgi,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.