Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS3B01G076300.1 | Wheat | plastid | 82.35 | 80.54 |
| TraesCS3D01G063600.1 | Wheat | plastid | 80.97 | 80.41 |
| HORVU2Hr1G123170.1 | Barley | cytosol | 3.63 | 55.26 |
| HORVU2Hr1G123240.1 | Barley | cytosol | 3.63 | 55.26 |
| HORVU6Hr1G089870.1 | Barley | cytosol | 3.81 | 52.38 |
| HORVU6Hr1G054520.3 | Barley | cytosol, mitochondrion | 18.86 | 29.95 |
| HORVU7Hr1G108580.4 | Barley | plastid | 20.76 | 29.27 |
| HORVU7Hr1G074690.3 | Barley | extracellular, plasma membrane | 19.38 | 28.5 |
| HORVU6Hr1G032070.2 | Barley | plastid | 19.72 | 27.4 |
| HORVU0Hr1G004830.6 | Barley | plastid | 16.09 | 22.79 |
| HORVU4Hr1G082700.4 | Barley | plastid | 16.09 | 20.95 |
Protein Annotations
| EnsemblPlants:HORVU3Hr1G092890.1 | EnsemblPlantsGene:HORVU3Hr1G092890 | Gene3D:3.40.50.720 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0016620 | GO:GO:0055114 | InterPro:GlycerAld/Erythrose_P_DH | InterPro:GlycerAld_3-P_DH_NAD(P)-bd | InterPro:NAD(P)-bd_dom_sf |
| PANTHER:PTHR10836 | PANTHER:PTHR10836:SF78 | PFAM:PF00044 | SEG:seg | SMART:SM00846 | SUPFAM:SSF51735 |
| SUPFAM:SSF55347 | UniParc:UPI000B4686AA | UniProt:A0A287MB19 | MapMan:35.1 | : | : |
Description
No Description!
Coordinates
chrchr3H:+:640480030..640483952
Molecular Weight (calculated)
60709.6 Da
IEP (calculated)
5.515
GRAVY (calculated)
-0.105
Length
578 amino acids
Sequence
(BLAST)
(BLAST)
001: RIPPANATDS RNHRNRISFF LCKLSSRRSA APDSHAASPS TGSAATATMP LDAAFSAPET TGSGSGAPVG ASSSTGPANS VAPHAASSSS ALEPTACAAL
101: FAGSASSSAA ALDSTTTCTA VFAGPTSSAA TALESTTCTT LLAGSSATST ASSSLDSATS PGTVLATPNA ALLRFIPPGS AFGDVLDPYA VCPADTVFPA
201: VLSCPVAPSV QAQLPDKDAP VDTSPVYVKG DPFAKTMYQD SEVGPRKRSR DEEDIAPAAE LNEVIKNVTE TVFDEQHRSF EYMDRDWLTK GEYETLEFRS
301: KAHPPQFKEV KKSKHGKLKL GPRPGKATKP RVGINGFGRT GRLVARLILH SKNMELVVVN DPFLSIDDIT RSLEDMPPGL FPPTKVLDIS EREKIPWGNL
401: GADYIVESTG IFTDTDTASS HLMGGAKKVI ICALSNEAPT FVYGVNENTY TPDIGIISIA DTATICLALL TKILHTTFGI RECRVTITGS SCSAAEISRA
501: LSSAIPDLVG RFVVNVCSDP QVKLSCVEMA VRLDECADYE MIKDSVRKES SSEKLHCVLA NLEGGVGLKA TDYLGDCR
101: FAGSASSSAA ALDSTTTCTA VFAGPTSSAA TALESTTCTT LLAGSSATST ASSSLDSATS PGTVLATPNA ALLRFIPPGS AFGDVLDPYA VCPADTVFPA
201: VLSCPVAPSV QAQLPDKDAP VDTSPVYVKG DPFAKTMYQD SEVGPRKRSR DEEDIAPAAE LNEVIKNVTE TVFDEQHRSF EYMDRDWLTK GEYETLEFRS
301: KAHPPQFKEV KKSKHGKLKL GPRPGKATKP RVGINGFGRT GRLVARLILH SKNMELVVVN DPFLSIDDIT RSLEDMPPGL FPPTKVLDIS EREKIPWGNL
401: GADYIVESTG IFTDTDTASS HLMGGAKKVI ICALSNEAPT FVYGVNENTY TPDIGIISIA DTATICLALL TKILHTTFGI RECRVTITGS SCSAAEISRA
501: LSSAIPDLVG RFVVNVCSDP QVKLSCVEMA VRLDECADYE MIKDSVRKES SSEKLHCVLA NLEGGVGLKA TDYLGDCR
001: MADKKIRIGI NGFGRIGRLV ARVVLQRDDV ELVAVNDPFI TTEYMTYMFK YDSVHGQWKH HELKVKDDKT LLFGEKPVTV FGIRNPEDIP WGEAGADFVV
101: ESTGVFTDKD KAAAHLKGGA KKVVISAPSK DAPMFVVGVN EHEYKSDLDI VSNASCTTNC LAPLAKVIND RFGIVEGLMT TVHSITATQK TVDGPSMKDW
201: RGGRAASFNI IPSSTGAAKA VGKVLPSLNG KLTGMSFRVP TVDVSVVDLT VRLEKAATYD EIKKAIKEES EGKMKGILGY TEDDVVSTDF VGDNRSSIFD
301: AKAGIALSDK FVKLVSWYDN EWGYSSRVVD LIVHMSKA
101: ESTGVFTDKD KAAAHLKGGA KKVVISAPSK DAPMFVVGVN EHEYKSDLDI VSNASCTTNC LAPLAKVIND RFGIVEGLMT TVHSITATQK TVDGPSMKDW
201: RGGRAASFNI IPSSTGAAKA VGKVLPSLNG KLTGMSFRVP TVDVSVVDLT VRLEKAATYD EIKKAIKEES EGKMKGILGY TEDDVVSTDF VGDNRSSIFD
301: AKAGIALSDK FVKLVSWYDN EWGYSSRVVD LIVHMSKA
Arabidopsis Description
GAPC2Glyceraldehyde-3-phosphate dehydrogenase GAPC2, cytosolic [Source:UniProtKB/Swiss-Prot;Acc:Q9FX54]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.