Factsheet for HORVU6Hr1G032070.2

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 10
mitochondrion 1
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS6D01G146900.1	Wheat	plastid	96.63	96.63
TraesCS6A01G157500.1	Wheat	plastid	95.91	95.91
TraesCS6B01G185400.1	Wheat	plastid	95.67	95.67
EES04595	Sorghum	plastid	90.62	91.28
GSMUA_Achr5P00240_001	Banana	cytosol	45.43	90.43
Os02t0171100-01	Rice	extracellular, plastid	88.46	89.54
Zm00001d015383_P001	Maize	plastid	89.42	88.78
Zm00001d053798_P004	Maize	plastid	82.93	83.13
AT1G79530.1	Thale cress	plastid	78.61	77.49
Bra008416.1-P	Field mustard	plastid	77.16	77.35
CDX79324	Canola	plastid	78.12	77.2
CDY25342	Canola	plastid	76.92	77.11
CDX67990	Canola	plastid	77.64	76.72
CDY22281	Canola	plastid	77.16	76.61
Solyc10g005510.2.1	Tomato	plastid	77.16	76.61
Bra026068.1-P	Field mustard	plastid	77.16	75.71
AT1G16300.1	Thale cress	plastid	76.2	75.48
PGSC0003DMT400029242	Potato	plastid	75.96	75.42
Bra003606.1-P	Field mustard	plastid	77.4	75.41
CDY35080	Canola	plastid	76.92	75.12
CDY33343	Canola	plastid	76.68	74.88
KRH66238	Soybean	plastid	75.0	74.64
KRH07324	Soybean	extracellular, nucleus	74.52	74.16
VIT_19s0085g00600.t01	Wine grape	plastid	76.44	74.13
HORVU7Hr1G108580.4	Barley	plastid	72.84	73.9
HORVU6Hr1G054520.3	Barley	cytosol, mitochondrion	56.25	64.29
HORVU6Hr1G089870.1	Barley	cytosol	6.49	64.29
HORVU2Hr1G123240.1	Barley	cytosol	5.77	63.16
HORVU2Hr1G123170.1	Barley	cytosol	5.77	63.16
HORVU7Hr1G074690.3	Barley	extracellular, plasma membrane	58.89	62.34
GSMUA_Achr5P00230_001	Banana	plastid	30.05	56.82
HORVU0Hr1G004830.6	Barley	plastid	42.07	42.89
GSMUA_Achr2P02630_001	Banana	endoplasmic reticulum, extracellular	13.46	42.11
HORVU4Hr1G082700.4	Barley	plastid	43.27	40.54
HORVU3Hr1G092890.1	Barley	plastid	27.4	19.72

Protein Annotations

KEGG:00010+1.2.1.12	KEGG:00710+1.2.1.12	MapMan:3.12.4	Gene3D:3.30.360.10	Gene3D:3.40.50.720	GO:GO:0000166
GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0005975	GO:GO:0006006	GO:GO:0008150
GO:GO:0008152	GO:GO:0016491	GO:GO:0016620	GO:GO:0050661	GO:GO:0051287	GO:GO:0055114
InterPro:GlycerAld/Erythrose_P_DH	InterPro:GlycerAld_3-P_DH_AS	InterPro:GlycerAld_3-P_DH_NAD(P)-bd	InterPro:GlycerAld_3-P_DH_cat	InterPro:Glyceraldehyde-3-P_DH_1	EnsemblPlantsGene:HORVU6Hr1G032070
EnsemblPlants:HORVU6Hr1G032070.2	UniProt:M0UXA5	InterPro:NAD(P)-bd_dom_sf	PFAM:PF00044	PFAM:PF02800	PRINTS:PR00078
ScanProsite:PS00071	PANTHER:PTHR10836	PANTHER:PTHR10836:SF46	SMART:SM00846	SUPFAM:SSF51735	SUPFAM:SSF55347
TIGRFAMs:TIGR01534	UniParc:UPI0002950D3E	SEG:seg	:	:	:

Description

Glyceraldehyde-3-phosphate dehydrogenase [Source:UniProtKB/TrEMBL;Acc:M0UXA5]

Coordinates

chrchr6H:+:138553877..138559578

Molecular Weight (calculated)

43885.5 Da

IEP (calculated)

8.444

GRAVY (calculated)

0.030

Length

416 amino acids

Sequence
(BLAST)

001: MAALSVPLRT AAAPSSSLAG SRAAADPSKV SCLRSTGPAH LACSFPSIAA SSSSVRNIVP LRAIATQAPP VVPQYSSVEK TKVGINGFGR IGRLVLRIAT
101: SRDDIEVVAV NDPFIDAKYM AYMFKYDSTH GPFKGSINVV DDSTLEINGK KITITSKRDP AEIPWGNFGA DYVVESSGVF TTIDKASVHL KGGAKKVVIS
201: APSADAPMFV VGVNEMSYDP KMNVVSNASC TTNCLAPLAK VVHEEFGILE GLMTTVHATT ATQKTVDGPS MKDWRGGRGA GQNIIPSSTG AAKAVGKVLP
301: ELNGKLTGMA FRVPTPNVSV VDLTCRLEKS ASYDDVKAAI KVASEGSLKG ILGYTDEDVV SNDFVGDTRS SIFDANAGMG LSSSFMKLVL WYDNEWGYSN
401: RVLDLIAHMA LVTAKH

Best Arabidopsis Sequence Match ( AT1G79530.1 )
(BLAST)

001: MAFSSLLRSA ASYTVAAPRP DFFSSPASDH SKVLSSLGFS RNLKPSRFSS GISSSLQNGN ARSVQPIKAT ATEVPSAVRR SSSSGKTKVG INGFGRIGRL
101: VLRIATSRDD IEVVAVNDPF IDAKYMAYML KYDSTHGNFK GSINVIDDST LEINGKKVNV VSKRDPSEIP WADLGADYVV ESSGVFTTLS KAASHLKGGA
201: KKVIISAPSA DAPMFVVGVN EHTYQPNMDI VSNASCTTNC LAPLAKVVHE EFGILEGLMT TVHATTATQK TVDGPSMKDW RGGRGASQNI IPSSTGAAKA
301: VGKVLPELNG KLTGMAFRVP TSNVSVVDLT CRLEKGASYE DVKAAIKHAS EGPLKGILGY TDEDVVSNDF VGDSRSSIFD ANAGIGLSKS FVKLVSWYDN
401: EWGYSNRVLD LIEHMALVAA SH

Arabidopsis Description

GAPCP1Glyceraldehyde-3-phosphate dehydrogenase GAPCP1, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9SAJ6]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.