Factsheet for Bra026068.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 9
mitochondrion 2
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY35080	Canola	plastid	97.41	96.95
CDY33343	Canola	plastid	96.7	96.24
AT1G16300.1	Thale cress	plastid	92.22	93.1
GSMUA_Achr5P00240_001	Banana	cytosol	44.34	89.95
Bra008416.1-P	Field mustard	plastid	85.61	87.47
Bra003606.1-P	Field mustard	plastid	85.85	85.25
Solyc10g005510.2.1	Tomato	plastid	79.72	80.67
KRH66238	Soybean	plastid	79.01	80.14
PGSC0003DMT400029242	Potato	plastid	78.54	79.47
KRH07324	Soybean	extracellular, nucleus	77.83	78.95
TraesCS7B01G380500.1	Wheat	plastid	75.94	78.73
TraesCS7A01G478100.2	Wheat	plastid	75.71	78.29
TraesCS6A01G157500.1	Wheat	plastid	76.65	78.12
TraesCS6D01G146900.1	Wheat	plastid	76.65	78.12
VIT_19s0085g00600.t01	Wine grape	plastid	79.01	78.09
Os02t0171100-01	Rice	extracellular, plastid	75.24	77.62
EES04595	Sorghum	plastid	75.47	77.48
TraesCS6B01G185400.1	Wheat	plastid	75.94	77.4
HORVU6Hr1G032070.2	Barley	plastid	75.71	77.16
Zm00001d015383_P001	Maize	plastid	75.94	76.85
Os06t0666600-01	Rice	extracellular, plastid	74.76	76.39
TraesCS7D01G465500.1	Wheat	plastid	75.71	74.31
Zm00001d053798_P004	Maize	plastid	71.7	73.25
Bra040213.1-P	Field mustard	cytosol	57.55	72.19
Bra026904.1-P	Field mustard	cytosol	57.31	71.89
Bra040146.1-P	Field mustard	cytosol	57.08	71.6
Bra016729.1-P	Field mustard	cytosol	57.08	71.39
Bra019722.1-P	Field mustard	cytosol	48.11	69.39
HORVU7Hr1G108580.4	Barley	plastid	66.27	68.54
GSMUA_Achr5P00230_001	Banana	plastid	30.19	58.18
Bra019797.1-P	Field mustard	plastid	41.27	43.86
GSMUA_Achr2P02630_001	Banana	endoplasmic reticulum, extracellular	13.68	43.61
Bra025219.1-P	Field mustard	plastid	38.92	43.42
Bra026948.1-P	Field mustard	plastid	40.57	43.11
Bra032939.1-P	Field mustard	plastid	33.02	41.92
Bra034927.1-P	Field mustard	plastid	43.4	41.07

Protein Annotations

KEGG:00010+1.2.1.12	KEGG:00710+1.2.1.12	MapMan:3.12.4	Gene3D:3.30.360.10	Gene3D:3.40.50.720	EnsemblPlantsGene:Bra026068
EnsemblPlants:Bra026068.1	EnsemblPlants:Bra026068.1-P	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004365
GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005975
GO:GO:0006006	GO:GO:0007275	GO:GO:0008150	GO:GO:0008152	GO:GO:0009536	GO:GO:0016491
GO:GO:0016620	GO:GO:0050661	GO:GO:0051287	GO:GO:0055114	GO:GO:0080022	GO:GO:0080144
InterPro:GlycerAld/Erythrose_P_DH	InterPro:GlycerAld_3-P_DH_AS	InterPro:GlycerAld_3-P_DH_NAD(P)-bd	InterPro:GlycerAld_3-P_DH_cat	InterPro:Glyceraldehyde-3-P_DH_1	UniProt:M4EBA9
InterPro:NAD(P)-bd_dom_sf	PFAM:PF00044	PFAM:PF02800	PRINTS:PR00078	ScanProsite:PS00071	PANTHER:PTHR10836
PANTHER:PTHR10836:SF46	SMART:SM00846	SUPFAM:SSF51735	SUPFAM:SSF55347	TIGRFAMs:TIGR01534	UniParc:UPI000253F18C
SEG:seg	:	:	:	:	:

Description

AT1G16300 (E=7e-204) GAPCP-2 | GAPCP-2; NAD or NADH binding / binding / catalytic/ glyceraldehyde-3-phosphate dehydrogenase (phosphorylating)/ glyceraldehyde-3-phosphate dehydrogenase

Coordinates

chrA06:+:6259232..6262169

Molecular Weight (calculated)

45297.8 Da

IEP (calculated)

8.942

GRAVY (calculated)

-0.104

Length

424 amino acids

Sequence
(BLAST)

001: MAYSSLLRSA ATSAATSAAA PRVELHTSPS FGHSQVTSSL GFSHNLTSSR FSVSTKSSSS LHARSVQPIK ATATEAPPAV YRSRSSGKTK VGINGFGRIG
101: RLVLRIATFR DDIEVVAVND PFIDAKYMAY MFKYDSTHGN YKGTINVIDD STLEINGKEV KVVSKRDPAE IPWADLGADY VVESSGVFTT LAKASSHLKG
201: GAKKVIISAP SADAPMFVVG VNERTYKPNM DIVSNASCTT NCLAPLAKVV HEEFGILEGL MTTVHATTAT QKTVDGPSMK DWRGGRGASQ NIIPSSTGAA
301: KAVGKVLPEL NGKLTGMAFR VPTPNVSVVD LTCRLEKDAS YEDVKAAIKF ASEGPLRGIM GYTEEDVVSS DFVGDSRSSI FDANAGIGLS KSFMKLVSWY
401: DNEWGYSNRV LDLIEHMALV SAIR

Best Arabidopsis Sequence Match ( AT1G16300.1 )
(BLAST)

001: MALSSLLRSA ATSAAAPRVE LYPSSSYNHS QVTSSLGFSH SLTSSRFSGA AVSTGKYNAK RVQPIKATAT EAPPAVHRSR SSGKTKVGIN GFGRIGRLVL
101: RIATFRDDIE VVAVNDPFID AKYMAYMFKY DSTHGNYKGT INVIDDSTLE INGKQVKVVS KRDPAEIPWA DLGAEYVVES SGVFTTVGQA SSHLKGGAKK
201: VIISAPSADA PMFVVGVNEK TYLPNMDIVS NASCTTNCLA PLAKVVHEEF GILEGLMTTV HATTATQKTV DGPSMKDWRG GRGASQNIIP SSTGAAKAVG
301: KVLPELNGKL TGMAFRVPTP NVSVVDLTCR LEKDASYEDV KAAIKFASEG PLRGILGYTE EDVVSNDFLG DSRSSIFDAN AGIGLSKSFM KLVSWYDNEW
401: GYSNRVLDLI EHMALVAASR

Arabidopsis Description

GAPCP2Glyceraldehyde-3-phosphate dehydrogenase GAPCP2, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q5E924]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.