Factsheet for GSMUA_Achr5P00230_001

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 6
cytosol 2
mitochondrion 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr2P02630_001	Banana	endoplasmic reticulum, extracellular	29.09	48.12
Zm00001d019945_P001	Maize	plastid	21.82	43.24
GSMUA_Achr7P03580_001	Banana	plastid	68.64	35.2
GSMUA_Achr8P33500_001	Banana	plastid	67.73	34.73
HORVU7Hr1G108580.4	Barley	plastid	57.73	30.98
TraesCS7B01G380500.1	Wheat	plastid	57.27	30.81
TraesCS6D01G146900.1	Wheat	plastid	58.18	30.77
TraesCS6A01G157500.1	Wheat	plastid	57.73	30.53
EES04595	Sorghum	plastid	57.27	30.51
TraesCS7A01G478100.2	Wheat	plastid	56.82	30.49
TraesCS6B01G185400.1	Wheat	plastid	57.27	30.29
Bra026068.1-P	Field mustard	plastid	58.18	30.19
Os02t0171100-01	Rice	extracellular, plastid	56.36	30.17
Os06t0666600-01	Rice	extracellular, plastid	56.82	30.12
VIT_19s0085g00600.t01	Wine grape	plastid	58.64	30.07
HORVU6Hr1G032070.2	Barley	plastid	56.82	30.05
Solyc10g005510.2.1	Tomato	plastid	56.82	29.83
CDY35080	Canola	plastid	57.73	29.81
CDY33343	Canola	plastid	57.73	29.81
CDY25342	Canola	plastid	55.91	29.64
Bra008416.1-P	Field mustard	plastid	55.91	29.64
CDY22281	Canola	plastid	56.36	29.59
PGSC0003DMT400029242	Potato	plastid	56.36	29.59
AT1G16300.1	Thale cress	plastid	56.36	29.52
CDX79324	Canola	plastid	56.36	29.45
AT1G79530.1	Thale cress	plastid	56.36	29.38
TraesCS7D01G465500.1	Wheat	plastid	57.27	29.17
CDX67990	Canola	plastid	55.45	28.98
Bra003606.1-P	Field mustard	plastid	55.45	28.57
KRH66238	Soybean	plastid	54.09	28.47
KRH07324	Soybean	extracellular, nucleus	53.64	28.23
GSMUA_Achr11P...	Banana	cytosol	33.64	21.45
GSMUA_Achr9P02180_001	Banana	endoplasmic reticulum	35.0	21.04
GSMUA_AchrUn_...	Banana	endoplasmic reticulum	34.09	20.89
GSMUA_Achr5P25410_001	Banana	unclear	35.0	19.54
GSMUA_Achr10P...	Banana	plastid	27.27	19.11
GSMUA_Achr11P...	Banana	plasma membrane	33.64	18.41
GSMUA_Achr11P...	Banana	mitochondrion	24.09	13.49
GSMUA_Achr11P...	Banana	plastid	26.82	13.05
GSMUA_Achr6P16250_001	Banana	plastid	25.91	13.01
GSMUA_Achr11P...	Banana	mitochondrion	24.55	12.92
GSMUA_Achr2P02600_001	Banana	cytosol	1.36	5.17
GSMUA_Achr2P02610_001	Banana	cytosol	0.91	2.6
GSMUA_Achr5P17220_001	Banana	extracellular	0.91	1.82
GSMUA_Achr5P00240_001	Banana	cytosol	1.36	1.44

Protein Annotations

EnsemblPlants:GSMUA_Achr5P00230_001	EnsemblPlants:GSMUA_Achr5T00230_001	EnsemblPlantsGene:GSMUA_Achr5G00230_001	Gene3D:3.40.50.720	GO:GO:0003674	GO:GO:0003824
GO:GO:0008150	GO:GO:0008152	GO:GO:0016620	GO:GO:0055114	InterPro:GlycerAld/Erythrose_P_DH	InterPro:GlycerAld_3-P_DH_NAD(P)-bd
InterPro:NAD(P)-bd_dom_sf	PANTHER:PTHR10836	PANTHER:PTHR10836:SF46	PFAM:PF00044	SEG:seg	SMART:SM00846
SUPFAM:SSF51735	UniParc:UPI000296E223	UniProt:M0SUF2	MapMan:35.1	:	:

Description

Hypothetical protein [Source:GMGC_GENE;Acc:GSMUA_Achr5G00230_001]

Coordinates

chr5:+:182504..185731

Molecular Weight (calculated)

23871.8 Da

IEP (calculated)

9.932

GRAVY (calculated)

-0.013

Length

220 amino acids

Sequence
(BLAST)

001: MALSTLLRSA FSVIGGSRDC FPSDSSRVLR IRSSSSAQIS SSFFGSSLTS VDIYSSHKHV ARRSIQPVKA TATEAPPVVK SSSRGGKTKI GINGFGRIGR
101: LVMRIATTRD DIEVVAVNDP FIDAKYMAYM LKYDSTHGVF KGTIKVVDES NLEINGKRIA VTCKRDPAEI PWGDYGAEYV VESSGVFTTM DKASAHLKAC
201: SIFLILLRWC KKGGNICSIC

Best Arabidopsis Sequence Match ( AT1G16300.1 )
(BLAST)

001: MALSSLLRSA ATSAAAPRVE LYPSSSYNHS QVTSSLGFSH SLTSSRFSGA AVSTGKYNAK RVQPIKATAT EAPPAVHRSR SSGKTKVGIN GFGRIGRLVL
101: RIATFRDDIE VVAVNDPFID AKYMAYMFKY DSTHGNYKGT INVIDDSTLE INGKQVKVVS KRDPAEIPWA DLGAEYVVES SGVFTTVGQA SSHLKGGAKK
201: VIISAPSADA PMFVVGVNEK TYLPNMDIVS NASCTTNCLA PLAKVVHEEF GILEGLMTTV HATTATQKTV DGPSMKDWRG GRGASQNIIP SSTGAAKAVG
301: KVLPELNGKL TGMAFRVPTP NVSVVDLTCR LEKDASYEDV KAAIKFASEG PLRGILGYTE EDVVSNDFLG DSRSSIFDAN AGIGLSKSFM KLVSWYDNEW
401: GYSNRVLDLI EHMALVAASR

Arabidopsis Description

GAPCP2Glyceraldehyde-3-phosphate dehydrogenase GAPCP2, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q5E924]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.