Factsheet for GSMUA_AchrUn_randomP18510_001

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum

Predictor Summary:

extracellular 5
endoplasmic reticulum 7
vacuole 5
plasma membrane 5
golgi 5
plastid 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum
Any Predictor:	plastid, secretory
BaCelLo:	secretory
EpiLoc:	plastid
iPSORT:	secretory
MultiLoc:	endoplasmic reticulum
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	endoplasmic reticulum

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr11P...	Banana	cytosol	88.58	92.17
Os04t0486600-01	Rice	plastid	86.07	91.69
Zm00001d051001_P002	Maize	cytosol	84.4	89.91
EES05377	Sorghum	cytosol	84.12	89.61
Os02t0601300-01	Rice	plasma membrane	84.12	89.61
TraesCS6D01G196300.2	Wheat	golgi, nucleus	83.84	89.32
TraesCS6A01G213700.1	Wheat	unclear	83.57	89.02
KXG21112	Sorghum	cytosol	83.29	88.72
TraesCS6B01G243700.1	Wheat	endoplasmic reticulum	84.96	85.2
GSMUA_Achr9P02180_001	Banana	endoplasmic reticulum	85.24	83.61
TraesCS7B01G234400.1	Wheat	cytosol	79.39	83.09
HORVU6Hr1G054520.3	Barley	cytosol, mitochondrion	83.57	82.42
GSMUA_Achr11P...	Banana	plasma membrane	88.02	78.61
GSMUA_Achr5P25410_001	Banana	unclear	86.07	78.43
GSMUA_Achr5P00240_001	Banana	cytosol	44.29	76.08
GSMUA_Achr11P...	Banana	mitochondrion	77.99	66.99
GSMUA_Achr2P02610_001	Banana	cytosol	13.93	64.94
Zm00001d017121_P001	Maize	plastid	85.79	60.39
GSMUA_Achr2P02600_001	Banana	cytosol	9.75	60.34
GSMUA_Achr8P33500_001	Banana	plastid	67.69	56.64
GSMUA_Achr7P03580_001	Banana	plastid	66.85	55.94
GSMUA_Achr5P17220_001	Banana	extracellular	14.76	48.18
GSMUA_Achr11P...	Banana	mitochondrion	44.29	40.46
GSMUA_Achr10P...	Banana	plastid	33.98	38.85
GSMUA_Achr6P16250_001	Banana	plastid	45.13	36.99
GSMUA_Achr11P...	Banana	plastid	43.73	34.73
GSMUA_Achr5P00230_001	Banana	plastid	20.89	34.09
GSMUA_Achr2P02630_001	Banana	endoplasmic reticulum, extracellular	9.47	25.56

Protein Annotations

KEGG:00010+1.2.1.12	KEGG:00710+1.2.1.12	MapMan:2.1.1.4.1	Gene3D:3.30.360.10	Gene3D:3.40.50.720	GO:GO:0000166
GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0005975	GO:GO:0006006	GO:GO:0008150
GO:GO:0008152	GO:GO:0016491	GO:GO:0016620	GO:GO:0050661	GO:GO:0051287	GO:GO:0055114
EnsemblPlantsGene:GSMUA_AchrUn_randomG18510_001	EnsemblPlants:GSMUA_AchrUn_randomP18510_001	EnsemblPlants:GSMUA_AchrUn_randomT18510_001	InterPro:GlycerAld/Erythrose_P_DH	InterPro:GlycerAld_3-P_DH_AS	InterPro:GlycerAld_3-P_DH_NAD(P)-bd
InterPro:GlycerAld_3-P_DH_cat	InterPro:Glyceraldehyde-3-P_DH_1	UniProt:M0UAB0	InterPro:NAD(P)-bd_dom_sf	PFAM:PF00044	PFAM:PF02800
PIRSF:PIRSF000149	PRINTS:PR00078	ScanProsite:PS00071	PANTHER:PTHR10836	PANTHER:PTHR10836:SF63	SMART:SM00846
SUPFAM:SSF51735	SUPFAM:SSF55347	SignalP:SignalP-noTM	TIGRFAMs:TIGR01534	TMHMM:TMhelix	UniParc:UPI00029553E2
SEG:seg	:	:	:	:	:

Description

Glyceraldehyde-3-phosphate dehydrogenase, cytosolic 3 [Source:GMGC_GENE;Acc:GSMUA_AchrUn_randomG18510_001]

Coordinates

chrchrUn_random:+:88725500..88729527

Molecular Weight (calculated)

39235.3 Da

IEP (calculated)

9.136

GRAVY (calculated)

0.007

Length

359 amino acids

Sequence
(BLAST)

001: MIFYVRILIT FVISFVLSVH RAAGKIKIGI NGFGRIGRLV ARVALQSEDV ELVAVNDPFI TTDYMTYMFK YDTVHGSWKH HEIKVKDSKT LLFGTKEVAV
101: FGFRNPEEIP WGETGAEYVV ESTGVFTDKD KAAAHLKGGA KKVIISAPSK DAPMFVVGVN ENEYKPDINI VSNVSCTTNC LAPLAKVVHD KFGIIEGLMT
201: TVHSITATQK TVDGPSSKDW RGGRAASFNI IPSSTGAAKA VGKVLPALNG KLTGMAFRVP TVDVSVVDLT VRLEKPATYE EIKAAIKAES EGKLKGILGY
301: VEEDLVSTDF LGDNRSSIFD AKAGIALNGN FVKLVSWYDN EWGYSSRVVD LVRHMHKTR

Best Arabidopsis Sequence Match ( AT1G13440.1 )
(BLAST)

001: MADKKIRIGI NGFGRIGRLV ARVVLQRDDV ELVAVNDPFI TTEYMTYMFK YDSVHGQWKH HELKVKDDKT LLFGEKPVTV FGIRNPEDIP WGEAGADFVV
101: ESTGVFTDKD KAAAHLKGGA KKVVISAPSK DAPMFVVGVN EHEYKSDLDI VSNASCTTNC LAPLAKVIND RFGIVEGLMT TVHSITATQK TVDGPSMKDW
201: RGGRAASFNI IPSSTGAAKA VGKVLPSLNG KLTGMSFRVP TVDVSVVDLT VRLEKAATYD EIKKAIKEES EGKMKGILGY TEDDVVSTDF VGDNRSSIFD
301: AKAGIALSDK FVKLVSWYDN EWGYSSRVVD LIVHMSKA

Arabidopsis Description

GAPC2Glyceraldehyde-3-phosphate dehydrogenase GAPC2, cytosolic [Source:UniProtKB/Swiss-Prot;Acc:Q9FX54]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.