Factsheet for GSMUA_Achr11P08720_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 5
plastid 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os04t0486600-01	Rice	plastid	90.14	92.28
Os02t0601300-01	Rice	plasma membrane	87.54	89.61
Zm00001d051001_P002	Maize	cytosol	86.96	89.02
TraesCS6D01G196300.2	Wheat	golgi, nucleus	86.67	88.72
EES05377	Sorghum	cytosol	86.67	88.72
GSMUA_AchrUn_...	Banana	endoplasmic reticulum	92.17	88.58
TraesCS6A01G213700.1	Wheat	unclear	86.38	88.43
KXG21112	Sorghum	cytosol	85.8	87.83
GSMUA_Achr9P02180_001	Banana	endoplasmic reticulum	89.57	84.43
TraesCS6B01G243700.1	Wheat	endoplasmic reticulum	86.96	83.8
TraesCS7B01G234400.1	Wheat	cytosol	82.03	82.51
HORVU6Hr1G054520.3	Barley	cytosol, mitochondrion	86.67	82.14
GSMUA_Achr11P...	Banana	plasma membrane	94.49	81.09
GSMUA_Achr5P25410_001	Banana	unclear	90.43	79.19
GSMUA_Achr5P00240_001	Banana	cytosol	47.25	77.99
GSMUA_Achr11P...	Banana	mitochondrion	82.03	67.7
GSMUA_Achr2P02610_001	Banana	cytosol	14.78	66.23
GSMUA_Achr2P02600_001	Banana	cytosol	10.14	60.34
Zm00001d017121_P001	Maize	plastid	86.96	58.82
GSMUA_Achr8P33500_001	Banana	plastid	71.59	57.58
GSMUA_Achr7P03580_001	Banana	plastid	70.72	56.88
GSMUA_Achr5P17220_001	Banana	extracellular	15.36	48.18
GSMUA_Achr11P...	Banana	mitochondrion	46.09	40.46
GSMUA_Achr10P...	Banana	plastid	34.49	37.9
GSMUA_Achr6P16250_001	Banana	plastid	45.8	36.07
GSMUA_Achr11P...	Banana	plastid	45.51	34.73
GSMUA_Achr5P00230_001	Banana	plastid	21.45	33.64
GSMUA_Achr2P02630_001	Banana	endoplasmic reticulum, extracellular	9.86	25.56

Protein Annotations

KEGG:00010+1.2.1.12	KEGG:00710+1.2.1.12	MapMan:2.1.1.4.1	Gene3D:3.30.360.10	Gene3D:3.40.50.720	GO:GO:0000166
GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0005975	GO:GO:0006006	GO:GO:0008150
GO:GO:0008152	GO:GO:0016491	GO:GO:0016620	GO:GO:0050661	GO:GO:0051287	GO:GO:0055114
EnsemblPlantsGene:GSMUA_Achr11G08720_001	EnsemblPlants:GSMUA_Achr11P08720_001	EnsemblPlants:GSMUA_Achr11T08720_001	InterPro:GlycerAld/Erythrose_P_DH	InterPro:GlycerAld_3-P_DH_AS	InterPro:GlycerAld_3-P_DH_NAD(P)-bd
InterPro:GlycerAld_3-P_DH_cat	InterPro:Glyceraldehyde-3-P_DH_1	UniProt:M0RQK2	InterPro:NAD(P)-bd_dom_sf	PFAM:PF00044	PFAM:PF02800
PIRSF:PIRSF000149	PRINTS:PR00078	ScanProsite:PS00071	PANTHER:PTHR10836	PANTHER:PTHR10836:SF63	SMART:SM00846
SUPFAM:SSF51735	SUPFAM:SSF55347	TIGRFAMs:TIGR01534	UniParc:UPI000295B926	SEG:seg	:

Description

Glyceraldehyde-3-phosphate dehydrogenase [Source:GMGC_GENE;Acc:GSMUA_Achr11G08720_001]

Coordinates

chr11:-:6738388..6742948

Molecular Weight (calculated)

37615.2 Da

IEP (calculated)

8.207

GRAVY (calculated)

-0.110

Length

345 amino acids

Sequence
(BLAST)

001: MSVSILIQTG KIKIGINGFG RIGRLVARVA LQSDDVELVA VNDPFITTDY MTYMFKYDTV HGSWKHHEIK VKDSKTLLFG DKQVTVFGVR NPEEIPWGET
101: GAEYIVESTG VFTDKDKAAA HLKGGAKKVI ISAPSKDAPM FVVGVNENEY KPDINIVSNA SCTTNCLAPL AKVVHDRFGI VEGLMTTVHA ITATQKTVDG
201: PSSKDWRGGR AASFNIIPSS TGAAKAVGKV LPALNGKLTG MAFRVPTVDV SVVDLTVRLE KEATYEEIKA AIKEESEGKL KGILGYVEED LVSTDFVGDK
301: RSSIFDAKAG ISLNGKFVKL VSWYDNEWGY SSRVIDLIRH MHKTQ

Best Arabidopsis Sequence Match ( AT1G13440.1 )
(BLAST)

001: MADKKIRIGI NGFGRIGRLV ARVVLQRDDV ELVAVNDPFI TTEYMTYMFK YDSVHGQWKH HELKVKDDKT LLFGEKPVTV FGIRNPEDIP WGEAGADFVV
101: ESTGVFTDKD KAAAHLKGGA KKVVISAPSK DAPMFVVGVN EHEYKSDLDI VSNASCTTNC LAPLAKVIND RFGIVEGLMT TVHSITATQK TVDGPSMKDW
201: RGGRAASFNI IPSSTGAAKA VGKVLPSLNG KLTGMSFRVP TVDVSVVDLT VRLEKAATYD EIKKAIKEES EGKMKGILGY TEDDVVSTDF VGDNRSSIFD
301: AKAGIALSDK FVKLVSWYDN EWGYSSRVVD LIVHMSKA

Arabidopsis Description

GAPC2Glyceraldehyde-3-phosphate dehydrogenase GAPC2, cytosolic [Source:UniProtKB/Swiss-Prot;Acc:Q9FX54]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.