Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
- plastid 2
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| GSMUA_Achr11P... | cytosol, cytosol, mitochondrion |
| GSMUA_Achr11P... | cytosol, cytosol, mitochondrion |
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr5P00240_001 | Banana | cytosol | 75.32 | 27.75 |
| GSMUA_Achr5P17220_001 | Banana | extracellular | 25.97 | 18.18 |
| PGSC0003DMT400044944 | Potato | extracellular | 64.94 | 14.79 |
| GSMUA_Achr11P... | Banana | cytosol | 66.23 | 14.78 |
| Solyc05g014470.2.1 | Tomato | extracellular, plastid | 63.64 | 14.5 |
| Bra019722.1-P | Field mustard | cytosol | 54.55 | 14.29 |
| Bra016729.1-P | Field mustard | cytosol | 62.34 | 14.16 |
| CDY49358 | Canola | cytosol, mitochondrion | 61.04 | 13.99 |
| GSMUA_AchrUn_... | Banana | endoplasmic reticulum | 64.94 | 13.93 |
| AT3G04120.1 | Thale cress | cytosol | 61.04 | 13.91 |
| Bra040146.1-P | Field mustard | cytosol | 61.04 | 13.91 |
| AT1G13440.1 | Thale cress | cytosol | 61.04 | 13.91 |
| Bra026904.1-P | Field mustard | cytosol | 59.74 | 13.61 |
| Bra040213.1-P | Field mustard | cytosol | 59.74 | 13.61 |
| VIT_01s0010g02460.t01 | Wine grape | cytosol | 59.74 | 13.53 |
| GSMUA_Achr7P03580_001 | Banana | plastid | 75.32 | 13.52 |
| CDX92059 | Canola | cytosol, endoplasmic reticulum, peroxisome | 61.04 | 13.51 |
| CDX74199 | Canola | endoplasmic reticulum | 61.04 | 13.35 |
| CDY42906 | Canola | cytosol | 61.04 | 13.31 |
| CDX98100 | Canola | cytosol, mitochondrion, peroxisome | 54.55 | 13.21 |
| GSMUA_Achr9P02180_001 | Banana | endoplasmic reticulum | 62.34 | 13.11 |
| CDY50169 | Canola | cytosol | 62.34 | 12.9 |
| CDY21098 | Canola | cytosol | 62.34 | 12.87 |
| GSMUA_Achr8P33500_001 | Banana | plastid | 71.43 | 12.82 |
| GSMUA_Achr11P... | Banana | plasma membrane | 66.23 | 12.69 |
| CDY26651 | Canola | mitochondrion, peroxisome | 53.25 | 12.31 |
| CDY30032 | Canola | cytosol | 62.34 | 12.21 |
| CDY21135 | Canola | cytosol, mitochondrion, peroxisome, plastid | 53.25 | 12.02 |
| GSMUA_Achr5P25410_001 | Banana | unclear | 61.04 | 11.93 |
| CDY16090 | Canola | cytoskeleton, cytosol, peroxisome | 62.34 | 11.16 |
| GSMUA_Achr11P... | Banana | mitochondrion | 59.74 | 11.0 |
| CDY29987 | Canola | cytosol, peroxisome, plastid | 53.25 | 10.9 |
| GSMUA_Achr11P... | Banana | mitochondrion | 40.26 | 7.89 |
| GSMUA_Achr10P... | Banana | plastid | 31.17 | 7.64 |
| GSMUA_Achr11P... | Banana | plastid | 40.26 | 6.86 |
| KRH37937 | Soybean | plastid | 7.79 | 6.82 |
| GSMUA_Achr6P16250_001 | Banana | plastid | 35.06 | 6.16 |
| PGSC0003DMT400044945 | Potato | cytosol | 5.19 | 2.26 |
| GSMUA_Achr2P02630_001 | Banana | endoplasmic reticulum, extracellular | 3.9 | 2.26 |
| GSMUA_Achr5P00230_001 | Banana | plastid | 2.6 | 0.91 |
| GSMUA_Achr2P02600_001 | Banana | cytosol | 0.0 | 0.0 |
Protein Annotations
| EnsemblPlants:GSMUA_Achr2P02610_001 | EnsemblPlants:GSMUA_Achr2T02610_001 | EnsemblPlantsGene:GSMUA_Achr2G02610_001 | Gene3D:3.30.360.10 | GO:GO:0003674 | GO:GO:0003824 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0016620 | GO:GO:0055114 | InterPro:GlycerAld/Erythrose_P_DH | InterPro:GlycerAld_3-P_DH_cat |
| PANTHER:PTHR10836 | PANTHER:PTHR10836:SF46 | PFAM:PF02800 | SEG:seg | SUPFAM:SSF55347 | UniParc:UPI0002957E41 |
| UniProt:M0S4K2 | MapMan:35.2 | : | : | : | : |
Description
Glyceraldehyde-3-phosphate dehydrogenase, cytosolic [Source:GMGC_GENE;Acc:GSMUA_Achr2G02610_001]
Coordinates
chr2:-:8375336..8376103
Molecular Weight (calculated)
8548.4 Da
IEP (calculated)
8.521
GRAVY (calculated)
-0.277
Length
77 amino acids
Sequence
(BLAST)
(BLAST)
1: MFAVGVNENT KKPSMNIVVH EEFGIAEGLM TTVHATTATQ KTVDGPSMKD WRGLCGAGQN IIPRLVQQRL LEKYFQN
001: MAFSSLLRSA ASYTVAAPRP DFFSSPASDH SKVLSSLGFS RNLKPSRFSS GISSSLQNGN ARSVQPIKAT ATEVPSAVRR SSSSGKTKVG INGFGRIGRL
101: VLRIATSRDD IEVVAVNDPF IDAKYMAYML KYDSTHGNFK GSINVIDDST LEINGKKVNV VSKRDPSEIP WADLGADYVV ESSGVFTTLS KAASHLKGGA
201: KKVIISAPSA DAPMFVVGVN EHTYQPNMDI VSNASCTTNC LAPLAKVVHE EFGILEGLMT TVHATTATQK TVDGPSMKDW RGGRGASQNI IPSSTGAAKA
301: VGKVLPELNG KLTGMAFRVP TSNVSVVDLT CRLEKGASYE DVKAAIKHAS EGPLKGILGY TDEDVVSNDF VGDSRSSIFD ANAGIGLSKS FVKLVSWYDN
401: EWGYSNRVLD LIEHMALVAA SH
101: VLRIATSRDD IEVVAVNDPF IDAKYMAYML KYDSTHGNFK GSINVIDDST LEINGKKVNV VSKRDPSEIP WADLGADYVV ESSGVFTTLS KAASHLKGGA
201: KKVIISAPSA DAPMFVVGVN EHTYQPNMDI VSNASCTTNC LAPLAKVVHE EFGILEGLMT TVHATTATQK TVDGPSMKDW RGGRGASQNI IPSSTGAAKA
301: VGKVLPELNG KLTGMAFRVP TSNVSVVDLT CRLEKGASYE DVKAAIKHAS EGPLKGILGY TDEDVVSNDF VGDSRSSIFD ANAGIGLSKS FVKLVSWYDN
401: EWGYSNRVLD LIEHMALVAA SH
Arabidopsis Description
GAPCP1Glyceraldehyde-3-phosphate dehydrogenase GAPCP1, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9SAJ6]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.