Factsheet for GSMUA_Achr5P00240_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1
plastid 1
cytosol 4
mitochondrion 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, plastid, secretory
BaCelLo:	secretory
EpiLoc:	plastid
MultiLoc:	cytosol
Plant-mPloc:	cytosol, mitochondrion
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr2P02600_001	Banana	cytosol	21.05	75.86
GSMUA_Achr2P02610_001	Banana	cytosol	27.75	75.32
GSMUA_Achr11P...	Banana	cytosol	77.99	47.25
EES04595	Sorghum	plastid	92.82	46.97
Os02t0171100-01	Rice	extracellular, plastid	91.39	46.47
Solyc10g005510.2.1	Tomato	plastid	92.34	46.06
PGSC0003DMT400029242	Potato	plastid	91.87	45.82
TraesCS7B01G380500.1	Wheat	plastid	89.47	45.72
TraesCS6D01G146900.1	Wheat	plastid	90.91	45.67
TraesCS6A01G157500.1	Wheat	plastid	90.91	45.67
CDY25342	Canola	plastid	90.43	45.54
Os06t0666600-01	Rice	extracellular, plastid	90.43	45.54
GSMUA_Achr8P33500_001	Banana	plastid	93.3	45.45
TraesCS6B01G185400.1	Wheat	plastid	90.43	45.43
HORVU6Hr1G032070.2	Barley	plastid	90.43	45.43
Bra008416.1-P	Field mustard	plastid	89.95	45.3
GSMUA_Achr7P03580_001	Banana	plastid	92.82	45.22
KRH66238	Soybean	plastid	90.43	45.22
KRH07324	Soybean	extracellular, nucleus	90.43	45.22
CDX79324	Canola	plastid	90.91	45.13
CDX67990	Canola	plastid	90.91	45.13
CDY22281	Canola	plastid	90.43	45.11
TraesCS7A01G478100.2	Wheat	plastid	88.04	44.88
GSMUA_Achr9P02180_001	Banana	endoplasmic reticulum	78.47	44.81
AT1G79530.1	Thale cress	plastid	90.43	44.79
AT1G16300.1	Thale cress	plastid	89.95	44.76
VIT_19s0085g00600.t01	Wine grape	plastid	91.39	44.52
Bra026068.1-P	Field mustard	plastid	89.95	44.34
GSMUA_AchrUn_...	Banana	endoplasmic reticulum	76.08	44.29
Bra003606.1-P	Field mustard	plastid	90.43	44.26
CDY35080	Canola	plastid	89.47	43.9
CDY33343	Canola	plastid	89.47	43.9
TraesCS7D01G465500.1	Wheat	plastid	88.04	42.59
GSMUA_Achr5P17220_001	Banana	extracellular	21.53	40.91
GSMUA_Achr5P25410_001	Banana	unclear	77.03	40.86
GSMUA_Achr11P...	Banana	plasma membrane	77.51	40.3
GSMUA_Achr11P...	Banana	mitochondrion	75.6	37.8
HORVU7Hr1G108580.4	Barley	plastid	70.33	35.85
GSMUA_Achr11P...	Banana	mitochondrion	52.63	27.99
GSMUA_Achr6P16250_001	Banana	plastid	50.72	24.2
GSMUA_Achr11P...	Banana	plastid	51.67	23.89
GSMUA_Achr10P...	Banana	plastid	32.06	21.34
Zm00001d019945_P001	Maize	plastid	2.39	4.5
GSMUA_Achr2P02630_001	Banana	endoplasmic reticulum, extracellular	2.39	3.76
GSMUA_Achr5P00230_001	Banana	plastid	1.44	1.36

Protein Annotations

Gene3D:3.30.360.10	MapMan:50.1.2	GO:GO:0003674	GO:GO:0003824	GO:GO:0008150	GO:GO:0008152
GO:GO:0016620	GO:GO:0055114	EnsemblPlantsGene:GSMUA_Achr5G00240_001	EnsemblPlants:GSMUA_Achr5P00240_001	EnsemblPlants:GSMUA_Achr5T00240_001	InterPro:GlycerAld/Erythrose_P_DH
InterPro:GlycerAld_3-P_DH_AS	InterPro:GlycerAld_3-P_DH_cat	UniProt:M0SUF3	InterPro:NAD(P)-bd_dom_sf	PFAM:PF02800	PRINTS:PR00078
ScanProsite:PS00071	PANTHER:PTHR10836	PANTHER:PTHR10836:SF46	SUPFAM:SSF51735	SUPFAM:SSF55347	UniParc:UPI0002958668
SEG:seg	:	:	:	:	:

Description

Glyceraldehyde-3-phosphate dehydrogenase, cytosolic [Source:GMGC_GENE;Acc:GSMUA_Achr5G00240_001]

Coordinates

chr5:+:185739..187982

Molecular Weight (calculated)

22320.5 Da

IEP (calculated)

6.350

GRAVY (calculated)

-0.087

Length

209 amino acids

Sequence
(BLAST)

001: MFVVGVNEKT YKPSMNIVSN ASCTTNCLAP LAKVVHEEFG IAEGLMTTVH ATTATQKTVD GPSTKDWRGG RGAGQNIIPS STGAAKAVGK VLPELNGKLT
101: GMAFRVPTPN VSVVDLTCRL EKSASYDDVK AAIRYASEGT LKGILGYTDD DVVSNDFVGD SRSSIFDAKA GIGLSDAFMK LVSWYDNEWG YSNRVLDLIE
201: HMALVSAHH

Best Arabidopsis Sequence Match ( AT1G13440.1 )
(BLAST)

001: MADKKIRIGI NGFGRIGRLV ARVVLQRDDV ELVAVNDPFI TTEYMTYMFK YDSVHGQWKH HELKVKDDKT LLFGEKPVTV FGIRNPEDIP WGEAGADFVV
101: ESTGVFTDKD KAAAHLKGGA KKVVISAPSK DAPMFVVGVN EHEYKSDLDI VSNASCTTNC LAPLAKVIND RFGIVEGLMT TVHSITATQK TVDGPSMKDW
201: RGGRAASFNI IPSSTGAAKA VGKVLPSLNG KLTGMSFRVP TVDVSVVDLT VRLEKAATYD EIKKAIKEES EGKMKGILGY TEDDVVSTDF VGDNRSSIFD
301: AKAGIALSDK FVKLVSWYDN EWGYSSRVVD LIVHMSKA

Arabidopsis Description

GAPC2Glyceraldehyde-3-phosphate dehydrogenase GAPC2, cytosolic [Source:UniProtKB/Swiss-Prot;Acc:Q9FX54]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.