Factsheet for TraesCS7D01G465500.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 7
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	plastid
ChloroP:	plastid
iPSORT:	mitochondrion
MultiLoc:	plastid
Predotar:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7A01G478100.2	Wheat	plastid	90.97	95.85
TraesCS7B01G380500.1	Wheat	plastid	90.51	95.6
Os06t0666600-01	Rice	extracellular, plastid	85.19	88.67
GSMUA_Achr5P00240_001	Banana	cytosol	42.59	88.04
HORVU7Hr1G108580.4	Barley	plastid	80.79	85.12
TraesCS6D01G146900.1	Wheat	plastid	81.02	84.13
Bra008416.1-P	Field mustard	plastid	74.54	77.59
CDY25342	Canola	plastid	74.54	77.59
CDY22281	Canola	plastid	75.0	77.33
AT1G16300.1	Thale cress	plastid	74.77	76.9
CDX79324	Canola	plastid	74.77	76.72
AT1G79530.1	Thale cress	plastid	74.77	76.54
CDX67990	Canola	plastid	74.31	76.25
Solyc10g005510.2.1	Tomato	plastid	73.61	75.89
KRH07324	Soybean	extracellular, nucleus	73.38	75.84
Bra026068.1-P	Field mustard	plastid	74.31	75.71
KRH66238	Soybean	plastid	72.92	75.36
CDY33343	Canola	plastid	74.31	75.35
Bra003606.1-P	Field mustard	plastid	74.31	75.18
CDY35080	Canola	plastid	74.07	75.12
PGSC0003DMT400029242	Potato	plastid	72.69	74.94
VIT_19s0085g00600.t01	Wine grape	plastid	73.61	74.13
TraesCS7D01G309500.1	Wheat	cytosol	55.32	70.92
TraesCS6D01G196300.2	Wheat	golgi, nucleus	55.09	70.62
GSMUA_Achr5P00230_001	Banana	plastid	29.17	57.27
GSMUA_Achr2P02630_001	Banana	endoplasmic reticulum, extracellular	13.43	43.61
TraesCS2D01G322900.1	Wheat	plastid	39.12	42.14
TraesCS4D01G319400.1	Wheat	plastid	41.44	40.32
TraesCS3D01G063600.1	Wheat	plastid	29.86	22.16

Protein Annotations

Gene3D:3.30.360.10	Gene3D:3.40.50.720	MapMan:50.1.2	GO:GO:0003674	GO:GO:0003824	GO:GO:0008150
GO:GO:0008152	GO:GO:0016620	GO:GO:0055114	InterPro:GlycerAld/Erythrose_P_DH	InterPro:GlycerAld_3-P_DH_AS	InterPro:GlycerAld_3-P_DH_NAD(P)-bd
InterPro:GlycerAld_3-P_DH_cat	InterPro:NAD(P)-bd_dom_sf	PFAM:PF00044	PFAM:PF02800	PRINTS:PR00078	ScanProsite:PS00071
PANTHER:PTHR10836	PANTHER:PTHR10836:SF46	SMART:SM00846	SUPFAM:SSF51735	SUPFAM:SSF55347	EnsemblPlantsGene:TraesCS7D01G465500
EnsemblPlants:TraesCS7D01G465500.1	SEG:seg	:	:	:	:

Description

No Description!

Coordinates

chr7D:+:579749234..579754239

Molecular Weight (calculated)

45718.6 Da

IEP (calculated)

8.344

GRAVY (calculated)

0.011

Length

432 amino acids

Sequence
(BLAST)

001: MASLSLSLRA SASPAASGSR AAAPIKASCV RSKVACSFPS VGATSSPARS IEPVRATATQ APPASSQSSS GEKTKVGING FGRIGRLVLR IAIDRDDIEV
101: VAVNDPFIDA KYMAYMFKYD STHGPFKGTI AVLDESTLEI NGKKVSVTSK RWCHISLFLS TPMLASVRFR YQVFFSLDPS DIPWGNFGAE YVVESSGVFT
201: TVEKASAHLK GGAKKVVISA PSADAPMFVV GVNEKNYNPS MDVVSNASCT TNCLAPVAKV VHEEFGILEG LMTTVHATTA TQKTVDGPSM KDWRGGRGAG
301: QNIIPSSTGA AKAVGKVLPA LNGKLTGMAF RVPTPNVSVV DLTCRLEKDA SYEDVKAAIK EASEGPLKGI LGYTDEDVVS NDFVGDTRSS IFDANAGMGL
401: SSSFMKLVSW YDNEWGYSNR VLDLIGHMVL VA

Best Arabidopsis Sequence Match ( AT1G13440.1 )
(BLAST)

001: MADKKIRIGI NGFGRIGRLV ARVVLQRDDV ELVAVNDPFI TTEYMTYMFK YDSVHGQWKH HELKVKDDKT LLFGEKPVTV FGIRNPEDIP WGEAGADFVV
101: ESTGVFTDKD KAAAHLKGGA KKVVISAPSK DAPMFVVGVN EHEYKSDLDI VSNASCTTNC LAPLAKVIND RFGIVEGLMT TVHSITATQK TVDGPSMKDW
201: RGGRAASFNI IPSSTGAAKA VGKVLPSLNG KLTGMSFRVP TVDVSVVDLT VRLEKAATYD EIKKAIKEES EGKMKGILGY TEDDVVSTDF VGDNRSSIFD
301: AKAGIALSDK FVKLVSWYDN EWGYSSRVVD LIVHMSKA

Arabidopsis Description

GAPC2Glyceraldehyde-3-phosphate dehydrogenase GAPC2, cytosolic [Source:UniProtKB/Swiss-Prot;Acc:Q9FX54]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.