Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum, extracellular
Predictor Summary:
Predictor Summary:
- extracellular 5
- endoplasmic reticulum 5
- vacuole 4
- plasma membrane 4
- golgi 4
- plastid 4
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d019945_P001 | Maize | plastid | 36.84 | 44.14 |
| GSMUA_Achr5P00230_001 | Banana | plastid | 48.12 | 29.09 |
| HORVU7Hr1G108580.4 | Barley | plastid | 45.11 | 14.63 |
| TraesCS7A01G478100.2 | Wheat | plastid | 43.61 | 14.15 |
| GSMUA_Achr7P03580_001 | Banana | plastid | 45.11 | 13.99 |
| TraesCS7B01G380500.1 | Wheat | plastid | 42.11 | 13.69 |
| Bra026068.1-P | Field mustard | plastid | 43.61 | 13.68 |
| AT1G16300.1 | Thale cress | plastid | 42.86 | 13.57 |
| TraesCS6D01G146900.1 | Wheat | plastid | 42.11 | 13.46 |
| TraesCS6A01G157500.1 | Wheat | plastid | 42.11 | 13.46 |
| HORVU6Hr1G032070.2 | Barley | plastid | 42.11 | 13.46 |
| TraesCS7D01G465500.1 | Wheat | plastid | 43.61 | 13.43 |
| CDY35080 | Canola | plastid | 42.86 | 13.38 |
| EES04595 | Sorghum | plastid | 41.35 | 13.32 |
| CDX79324 | Canola | plastid | 42.11 | 13.3 |
| GSMUA_Achr8P33500_001 | Banana | plastid | 42.86 | 13.29 |
| CDY25342 | Canola | plastid | 41.35 | 13.25 |
| Bra008416.1-P | Field mustard | plastid | 41.35 | 13.25 |
| TraesCS6B01G185400.1 | Wheat | plastid | 41.35 | 13.22 |
| CDY33343 | Canola | plastid | 42.11 | 13.15 |
| CDY22281 | Canola | plastid | 41.35 | 13.13 |
| CDX67990 | Canola | plastid | 41.35 | 13.06 |
| AT1G79530.1 | Thale cress | plastid | 41.35 | 13.03 |
| Os02t0171100-01 | Rice | extracellular, plastid | 39.85 | 12.9 |
| Bra003606.1-P | Field mustard | plastid | 41.35 | 12.88 |
| Os06t0666600-01 | Rice | extracellular, plastid | 39.85 | 12.77 |
| KRH07324 | Soybean | extracellular, nucleus | 39.1 | 12.44 |
| KRH66238 | Soybean | plastid | 39.1 | 12.44 |
| VIT_19s0085g00600.t01 | Wine grape | plastid | 39.1 | 12.12 |
| Solyc10g005510.2.1 | Tomato | plastid | 37.59 | 11.93 |
| PGSC0003DMT400029242 | Potato | plastid | 37.59 | 11.93 |
| GSMUA_Achr11P... | Banana | cytosol | 25.56 | 9.86 |
| GSMUA_Achr9P02180_001 | Banana | endoplasmic reticulum | 26.32 | 9.56 |
| GSMUA_AchrUn_... | Banana | endoplasmic reticulum | 25.56 | 9.47 |
| GSMUA_Achr5P25410_001 | Banana | unclear | 27.07 | 9.14 |
| GSMUA_Achr11P... | Banana | plasma membrane | 26.32 | 8.71 |
| GSMUA_Achr10P... | Banana | plastid | 17.29 | 7.32 |
| GSMUA_Achr11P... | Banana | plastid | 21.8 | 6.42 |
| GSMUA_Achr11P... | Banana | mitochondrion | 18.05 | 6.11 |
| GSMUA_Achr6P16250_001 | Banana | plastid | 18.8 | 5.71 |
| GSMUA_Achr2P02610_001 | Banana | cytosol | 2.26 | 3.9 |
| GSMUA_Achr11P... | Banana | mitochondrion | 12.03 | 3.83 |
| GSMUA_Achr2P02600_001 | Banana | cytosol | 1.5 | 3.45 |
| GSMUA_Achr5P00240_001 | Banana | cytosol | 3.76 | 2.39 |
| GSMUA_Achr5P17220_001 | Banana | extracellular | 0.0 | 0.0 |
Protein Annotations
| EnsemblPlants:GSMUA_Achr2P02630_001 | EnsemblPlants:GSMUA_Achr2T02630_001 | EnsemblPlantsGene:GSMUA_Achr2G02630_001 | Gene3D:3.40.50.720 | GO:GO:0003674 | GO:GO:0003824 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0016620 | GO:GO:0055114 | InterPro:GlycerAld/Erythrose_P_DH | InterPro:GlycerAld_3-P_DH_NAD(P)-bd |
| InterPro:NAD(P)-bd_dom_sf | PANTHER:PTHR10836 | PANTHER:PTHR10836:SF46 | PFAM:PF00044 | SEG:seg | SignalP:SignalP-noTM |
| SUPFAM:SSF51735 | UniParc:UPI000294EDBD | UniProt:M0S4K4 | MapMan:35.1 | : | : |
Description
Hypothetical protein [Source:GMGC_GENE;Acc:GSMUA_Achr2G02630_001]
Coordinates
chr2:-:8376924..8379476
Molecular Weight (calculated)
14761.0 Da
IEP (calculated)
8.489
GRAVY (calculated)
0.262
Length
133 amino acids
Sequence
(BLAST)
(BLAST)
001: MFCVHCLFLL IRSLNSAQIS SDFFGSALIS VEACSSPNCD ARRNIQPDKA TVTEAPPLLK SSKSGRKTKI GINGFGHIGR LVMRIVTTRD DIEAVSVNDP
101: FIDAKYMIVS IIYSIIPICS FTQNGSYYFF HLF
101: FIDAKYMIVS IIYSIIPICS FTQNGSYYFF HLF
001: MALSSLLRSA ATSAAAPRVE LYPSSSYNHS QVTSSLGFSH SLTSSRFSGA AVSTGKYNAK RVQPIKATAT EAPPAVHRSR SSGKTKVGIN GFGRIGRLVL
101: RIATFRDDIE VVAVNDPFID AKYMAYMFKY DSTHGNYKGT INVIDDSTLE INGKQVKVVS KRDPAEIPWA DLGAEYVVES SGVFTTVGQA SSHLKGGAKK
201: VIISAPSADA PMFVVGVNEK TYLPNMDIVS NASCTTNCLA PLAKVVHEEF GILEGLMTTV HATTATQKTV DGPSMKDWRG GRGASQNIIP SSTGAAKAVG
301: KVLPELNGKL TGMAFRVPTP NVSVVDLTCR LEKDASYEDV KAAIKFASEG PLRGILGYTE EDVVSNDFLG DSRSSIFDAN AGIGLSKSFM KLVSWYDNEW
401: GYSNRVLDLI EHMALVAASR
101: RIATFRDDIE VVAVNDPFID AKYMAYMFKY DSTHGNYKGT INVIDDSTLE INGKQVKVVS KRDPAEIPWA DLGAEYVVES SGVFTTVGQA SSHLKGGAKK
201: VIISAPSADA PMFVVGVNEK TYLPNMDIVS NASCTTNCLA PLAKVVHEEF GILEGLMTTV HATTATQKTV DGPSMKDWRG GRGASQNIIP SSTGAAKAVG
301: KVLPELNGKL TGMAFRVPTP NVSVVDLTCR LEKDASYEDV KAAIKFASEG PLRGILGYTE EDVVSNDFLG DSRSSIFDAN AGIGLSKSFM KLVSWYDNEW
401: GYSNRVLDLI EHMALVAASR
Arabidopsis Description
GAPCP2Glyceraldehyde-3-phosphate dehydrogenase GAPCP2, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q5E924]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.