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Thale cress
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Thale cress
Subcellular Localization
min:
: max

 
Winner_takes_all: plastid

Predictor Summary:
  • plastid 8
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:plastid
Any Predictor:mitochondrion, plastid
BaCelLo:plastid
ChloroP:plastid
iPSORT:mitochondrion
MultiLoc:plastid
Predotar:plastid
PProwler:plastid
TargetP:plastid
WoLF PSORT:plastid
YLoc:plastid
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDX79324 Canola plastid 91.47 91.69
CDY25342 Canola plastid 90.05 91.57
CDX67990 Canola plastid 91.23 91.45
Bra008416.1-P Field mustard plastid 89.81 91.33
CDY22281 Canola plastid 90.52 91.17
GSMUA_Achr5P00240_001 Banana cytosol 44.79 90.43
Bra003606.1-P Field mustard plastid 91.0 89.93
AT1G16300.1 Thale cress plastid 86.49 86.9
KRH66238 Soybean plastid 80.33 81.1
Solyc10g005510.2.1 Tomato plastid 80.33 80.91
KRH07324 Soybean extracellular, nucleus 79.38 80.14
PGSC0003DMT400029242 Potato plastid 79.15 79.71
TraesCS7A01G478100.2 Wheat plastid 77.01 79.27
TraesCS6D01G146900.1 Wheat plastid 77.96 79.09
TraesCS7B01G380500.1 Wheat plastid 76.54 78.97
HORVU6Hr1G032070.2 Barley plastid 77.49 78.61
TraesCS6A01G157500.1 Wheat plastid 77.49 78.61
Os02t0171100-01 Rice extracellular, plastid 76.54 78.59
EES04595 Sorghum plastid 76.78 78.45
VIT_19s0085g00600.t01 Wine grape plastid 79.62 78.32
TraesCS6B01G185400.1 Wheat plastid 77.01 78.12
Os06t0666600-01 Rice extracellular, plastid 76.3 77.59
Zm00001d015383_P001 Maize plastid 76.07 76.61
TraesCS7D01G465500.1 Wheat plastid 76.54 74.77
Zm00001d053798_P004 Maize plastid 72.27 73.49
AT3G04120.1 Thale cress cytosol 58.29 72.78
AT1G13440.1 Thale cress cytosol 58.06 72.49
HORVU7Hr1G108580.4 Barley plastid 67.06 69.02
GSMUA_Achr5P00230_001 Banana plastid 29.38 56.36
AT3G26650.1 Thale cress plastid 40.52 43.18
GSMUA_Achr2P02630_001 Banana endoplasmic reticulum, extracellular 13.03 41.35
AT1G42970.1 Thale cress plastid 43.6 41.16
AT1G12900.5 Thale cress endoplasmic reticulum 42.65 40.82
Protein Annotations
KEGG:00010+1.2.1.12KEGG:00710+1.2.1.12MapMan:3.12.4Gene3D:3.30.360.10Gene3D:3.40.50.720EntrezGene:844291
ProteinID:AAD30223.1ProteinID:AEE36260.1EMBL:AF348583EMBL:AK117920ArrayExpress:AT1G79530EnsemblPlantsGene:AT1G79530
RefSeq:AT1G79530TAIR:AT1G79530RefSeq:AT1G79530-TAIR-GEnsemblPlants:AT1G79530.1TAIR:AT1G79530.1Unigene:At.17116
Symbol:GAPCP-1GO:GO:0000003GO:GO:0000166GO:GO:0003674GO:GO:0003824GO:GO:0004365
GO:GO:0005488GO:GO:0005507GO:GO:0005575GO:GO:0005622GO:GO:0005623GO:GO:0005737
GO:GO:0005975GO:GO:0006006GO:GO:0006091GO:GO:0006096GO:GO:0006139GO:GO:0007275
GO:GO:0008150GO:GO:0008152GO:GO:0008270GO:GO:0009056GO:GO:0009058GO:GO:0009507
GO:GO:0009536GO:GO:0009555GO:GO:0009570GO:GO:0009719GO:GO:0009735GO:GO:0009791
GO:GO:0009908GO:GO:0009987GO:GO:0016020GO:GO:0016491GO:GO:0016620GO:GO:0048658
GO:GO:0050661GO:GO:0051287GO:GO:0055114GO:GO:0080022GO:GO:0080144InterPro:GlycerAld/Erythrose_P_DH
InterPro:GlycerAld_3-P_DH_ASInterPro:GlycerAld_3-P_DH_NAD(P)-bdInterPro:GlycerAld_3-P_DH_catInterPro:Glyceraldehyde-3-P_DH_1InterPro:NAD(P)-bd_dom_sfRefSeq:NP_178071.1
PFAM:PF00044PFAM:PF02800PO:PO:0000293PO:PO:0009025PRINTS:PR00078ScanProsite:PS00071
PANTHER:PTHR10836PANTHER:PTHR10836:SF46UniProt:Q9SAJ6SMART:SM00846SUPFAM:SSF51735SUPFAM:SSF55347
TIGRFAMs:TIGR01534UniParc:UPI00000AC07DSEG:seg:::
Description
GAPCP1Glyceraldehyde-3-phosphate dehydrogenase GAPCP1, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9SAJ6]
Coordinates
chr1:-:29915902..29919408
Molecular Weight (calculated)
44833.1 Da
IEP (calculated)
8.970
GRAVY (calculated)
-0.111
Length
422 amino acids
Sequence
(BLAST)
001: MAFSSLLRSA ASYTVAAPRP DFFSSPASDH SKVLSSLGFS RNLKPSRFSS GISSSLQNGN ARSVQPIKAT ATEVPSAVRR SSSSGKTKVG INGFGRIGRL
101: VLRIATSRDD IEVVAVNDPF IDAKYMAYML KYDSTHGNFK GSINVIDDST LEINGKKVNV VSKRDPSEIP WADLGADYVV ESSGVFTTLS KAASHLKGGA
201: KKVIISAPSA DAPMFVVGVN EHTYQPNMDI VSNASCTTNC LAPLAKVVHE EFGILEGLMT TVHATTATQK TVDGPSMKDW RGGRGASQNI IPSSTGAAKA
301: VGKVLPELNG KLTGMAFRVP TSNVSVVDLT CRLEKGASYE DVKAAIKHAS EGPLKGILGY TDEDVVSNDF VGDSRSSIFD ANAGIGLSKS FVKLVSWYDN
401: EWGYSNRVLD LIEHMALVAA SH
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.