Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 7
- mitochondrion 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY28536 | Canola | plastid | 90.66 | 94.47 |
| CDX83635 | Canola | plastid | 90.66 | 94.47 |
| CDY13649 | Canola | plastid | 90.4 | 94.21 |
| Bra025219.1-P | Field mustard | plastid | 90.4 | 94.21 |
| Bra032939.1-P | Field mustard | plastid | 77.53 | 91.92 |
| CDY48981 | Canola | plastid | 85.1 | 91.58 |
| KRG94751 | Soybean | extracellular, nucleus | 87.63 | 86.1 |
| KRH06774 | Soybean | nucleus | 87.37 | 85.86 |
| PGSC0003DMT400030050 | Potato | cytosol | 86.11 | 85.46 |
| VIT_14s0068g00680.t01 | Wine grape | plastid | 87.12 | 85.4 |
| Solyc04g009030.2.1 | Tomato | plastid | 85.61 | 84.96 |
| Os04t0459500-02 | Rice | plastid | 86.11 | 84.83 |
| TraesCS2B01G342200.1 | Wheat | plastid | 85.35 | 84.29 |
| TraesCS2D01G322900.1 | Wheat | plastid | 85.35 | 84.29 |
| TraesCS2A01G344600.1 | Wheat | golgi, plastid | 85.1 | 84.04 |
| Zm00001d003429_P001 | Maize | plastid | 85.35 | 83.87 |
| HORVU0Hr1G004830.6 | Barley | plastid | 85.1 | 82.6 |
| GSMUA_Achr10P... | Banana | plastid | 65.15 | 82.17 |
| AT1G12900.5 | Thale cress | endoplasmic reticulum | 90.66 | 81.41 |
| Solyc02g020940.2.1 | Tomato | plastid | 83.59 | 80.93 |
| KXG26468 | Sorghum | plastid | 84.6 | 80.14 |
| Zm00001d025607_P001 | Maize | cytosol, plastid | 75.25 | 80.11 |
| Zm00001d025599_P001 | Maize | plastid | 80.05 | 78.66 |
| Zm00001d025593_P001 | Maize | plastid | 79.29 | 77.92 |
| GSMUA_Achr6P16250_001 | Banana | plastid | 85.35 | 77.17 |
| KRH70104 | Soybean | plastid | 52.02 | 74.64 |
| AT1G42970.1 | Thale cress | plastid | 73.74 | 65.32 |
| AT3G04120.1 | Thale cress | cytosol | 39.9 | 46.75 |
| AT1G13440.1 | Thale cress | cytosol | 39.39 | 46.15 |
| AT1G79530.1 | Thale cress | plastid | 43.18 | 40.52 |
| AT1G16300.1 | Thale cress | plastid | 41.41 | 39.05 |
Protein Annotations
| KEGG:00010+1.2.1.12 | KEGG:00710+1.2.1.12 | MapMan:1.2.3 | Gene3D:3.30.360.10 | Gene3D:3.40.50.720 | PDB:3K2B |
| PDB:3QV1 | PDB:3RVD | EntrezGene:822277 | UniProt:A0A178VLF6 | ProteinID:AAA32793.1 | ProteinID:AAB23532.1 |
| ProteinID:AEE77191.1 | EMBL:AF428431 | ArrayExpress:AT3G26650 | EnsemblPlantsGene:AT3G26650 | RefSeq:AT3G26650 | TAIR:AT3G26650 |
| RefSeq:AT3G26650-TAIR-G | EnsemblPlants:AT3G26650.1 | TAIR:AT3G26650.1 | EMBL:AY058107 | EMBL:AY058140 | EMBL:AY075637 |
| EMBL:AY142053 | ProteinID:BAB01730.1 | ProteinID:CAA66816.1 | Symbol:GAPA | GO:GO:0000166 | GO:GO:0003674 |
| GO:GO:0003824 | GO:GO:0004365 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005576 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005975 | GO:GO:0006006 | GO:GO:0006950 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009409 | GO:GO:0009416 | GO:GO:0009507 |
| GO:GO:0009535 | GO:GO:0009536 | GO:GO:0009570 | GO:GO:0009579 | GO:GO:0009628 | GO:GO:0009744 |
| GO:GO:0009941 | GO:GO:0009987 | GO:GO:0010319 | GO:GO:0015979 | GO:GO:0016020 | GO:GO:0016043 |
| GO:GO:0016491 | GO:GO:0016620 | GO:GO:0019253 | GO:GO:0031969 | GO:GO:0042802 | GO:GO:0042803 |
| GO:GO:0047100 | GO:GO:0048046 | GO:GO:0050661 | GO:GO:0051287 | GO:GO:0051289 | GO:GO:0055114 |
| GO:GO:0097718 | GO:GO:0099080 | InterPro:GlycerAld/Erythrose_P_DH | InterPro:GlycerAld_3-P_DH_AS | InterPro:GlycerAld_3-P_DH_NAD(P)-bd | InterPro:GlycerAld_3-P_DH_cat |
| InterPro:Glyceraldehyde-3-P_DH_1 | EMBL:M64114 | InterPro:NAD(P)-bd_dom_sf | RefSeq:NP_566796.2 | ProteinID:OAP05662.1 | UniProt:P25856 |
| PFAM:PF00044 | PFAM:PF02800 | PIRSF:PIRSF000149 | PO:PO:0000005 | PO:PO:0000013 | PO:PO:0000037 |
| PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001054 | PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001170 |
| PO:PO:0001185 | PO:PO:0004507 | PO:PO:0006339 | PO:PO:0007064 | PO:PO:0007095 | PO:PO:0007098 |
| PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 |
| PO:PO:0009001 | PO:PO:0009005 | PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 |
| PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 |
| PO:PO:0009052 | PO:PO:0020030 | PO:PO:0020038 | PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 |
| PO:PO:0025281 | PRINTS:PR00078 | ScanProsite:PS00071 | PANTHER:PTHR43148 | PANTHER:PTHR43148:SF5 | SMART:SM00846 |
| SUPFAM:SSF51735 | SUPFAM:SSF55347 | TIGRFAMs:TIGR01534 | UniParc:UPI0000001130 | SEG:seg | : |
Description
GAPA1Glyceraldehyde-3-phosphate dehydrogenase GAPA1, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:P25856]
Coordinates
chr3:+:9794862..9797045
Molecular Weight (calculated)
42491.9 Da
IEP (calculated)
7.895
GRAVY (calculated)
-0.017
Length
396 amino acids
Sequence
(BLAST)
(BLAST)
001: MASVTFSVPK GFTEFSGLRS SSASLPFGKK LSSDEFVSIV SFQTSAMGSS GGYRKGVTEA KLKVAINGFG RIGRNFLRCW HGRKDSPLDI IAINDTGGVK
101: QASHLLKYDS TLGIFDADVK PSGETAISVD GKIIQVVSNR NPSLLPWKEL GIDIVIEGTG VFVDREGAGK HIEAGAKKVI ITAPGKGDIP TYVVGVNADA
201: YSHDEPIISN ASCTTNCLAP FVKVLDQKFG IIKGTMTTTH SYTGDQRLLD ASHRDLRRAR AAALNIVPTS TGAAKAVALV LPNLKGKLNG IALRVPTPNV
301: SVVDLVVQVS KKTFAEEVNA AFRDSAEKEL KGILDVCDEP LVSVDFRCSD FSTTIDSSLT MVMGDDMVKV IAWYDNEWGY SQRVVDLADI VANNWK
101: QASHLLKYDS TLGIFDADVK PSGETAISVD GKIIQVVSNR NPSLLPWKEL GIDIVIEGTG VFVDREGAGK HIEAGAKKVI ITAPGKGDIP TYVVGVNADA
201: YSHDEPIISN ASCTTNCLAP FVKVLDQKFG IIKGTMTTTH SYTGDQRLLD ASHRDLRRAR AAALNIVPTS TGAAKAVALV LPNLKGKLNG IALRVPTPNV
301: SVVDLVVQVS KKTFAEEVNA AFRDSAEKEL KGILDVCDEP LVSVDFRCSD FSTTIDSSLT MVMGDDMVKV IAWYDNEWGY SQRVVDLADI VANNWK
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.