Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 7
PPI
Inferred distinct locusB in Crop
locusB | locations |
---|---|
HORVU4Hr1G053940.2 |
Inferred from Arabidopsis experimental PPI
Ath locusA | locusB | Ath locusB | Paper |
---|---|---|---|
AT3G26650.1 | HORVU4Hr1G053940.2 | AT3G62410.1 | 17947231 |
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
TraesCS2D01G322900.1 | Wheat | plastid | 98.04 | 99.75 |
TraesCS2B01G342200.1 | Wheat | plastid | 98.04 | 99.75 |
TraesCS2A01G344600.1 | Wheat | golgi, plastid | 97.79 | 99.5 |
Os04t0459500-02 | Rice | plastid | 91.42 | 92.79 |
Zm00001d003429_P001 | Maize | plastid | 90.2 | 91.32 |
KXG26468 | Sorghum | plastid | 89.95 | 87.8 |
Bra026948.1-P | Field mustard | plastid | 85.29 | 87.22 |
CDY16038 | Canola | plastid | 85.29 | 87.22 |
CDY26599 | Canola | plastid | 85.29 | 87.22 |
CDX98028 | Canola | plastid | 84.56 | 86.47 |
CDY19412 | Canola | plastid | 84.56 | 86.47 |
Bra019797.1-P | Field mustard | plastid | 84.31 | 86.22 |
AT3G26650.1 | Thale cress | plastid | 82.6 | 85.1 |
Zm00001d025607_P001 | Maize | cytosol, plastid | 76.72 | 84.14 |
CDY28536 | Canola | plastid | 78.19 | 83.95 |
Bra025219.1-P | Field mustard | plastid | 77.94 | 83.68 |
CDY13649 | Canola | plastid | 77.94 | 83.68 |
CDX83635 | Canola | plastid | 77.94 | 83.68 |
KRG94751 | Soybean | extracellular, nucleus | 82.35 | 83.37 |
Zm00001d025599_P001 | Maize | plastid | 82.11 | 83.13 |
KRH06774 | Soybean | nucleus | 81.86 | 82.88 |
PGSC0003DMT400030050 | Potato | cytosol | 80.88 | 82.71 |
CDY48981 | Canola | plastid | 74.51 | 82.61 |
Solyc04g009030.2.1 | Tomato | plastid | 80.64 | 82.46 |
Zm00001d025593_P001 | Maize | plastid | 81.37 | 82.38 |
Bra032939.1-P | Field mustard | plastid | 67.4 | 82.34 |
VIT_14s0068g00680.t01 | Wine grape | plastid | 81.37 | 82.18 |
GSMUA_Achr10P... | Banana | plastid | 62.99 | 81.85 |
Solyc02g020940.2.1 | Tomato | plastid | 79.66 | 79.46 |
AT1G12900.5 | Thale cress | endoplasmic reticulum | 84.56 | 78.23 |
GSMUA_Achr6P16250_001 | Banana | plastid | 81.62 | 76.03 |
KRH70104 | Soybean | plastid | 47.06 | 69.57 |
HORVU4Hr1G082700.4 | Barley | plastid | 70.83 | 65.09 |
HORVU2Hr1G123240.1 | Barley | cytosol | 4.66 | 50.0 |
HORVU2Hr1G123170.1 | Barley | cytosol | 4.66 | 50.0 |
HORVU6Hr1G089870.1 | Barley | cytosol | 4.9 | 47.62 |
HORVU6Hr1G054520.3 | Barley | cytosol, mitochondrion | 38.97 | 43.68 |
HORVU6Hr1G032070.2 | Barley | plastid | 42.89 | 42.07 |
HORVU7Hr1G074690.3 | Barley | extracellular, plasma membrane | 39.71 | 41.22 |
HORVU7Hr1G108580.4 | Barley | plastid | 36.76 | 36.59 |
HORVU3Hr1G092890.1 | Barley | plastid | 22.79 | 16.09 |
Protein Annotations
KEGG:00010+1.2.1.12 | KEGG:00710+1.2.1.12 | MapMan:1.2.3 | Gene3D:3.30.360.10 | Gene3D:3.40.50.720 | UniProt:A0A287DVV6 |
GO:GO:0000166 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005488 | GO:GO:0005975 | GO:GO:0006006 |
GO:GO:0008150 | GO:GO:0008152 | GO:GO:0016491 | GO:GO:0016620 | GO:GO:0050661 | GO:GO:0051287 |
GO:GO:0055114 | InterPro:GlycerAld/Erythrose_P_DH | InterPro:GlycerAld_3-P_DH_AS | InterPro:GlycerAld_3-P_DH_NAD(P)-bd | InterPro:GlycerAld_3-P_DH_cat | InterPro:Glyceraldehyde-3-P_DH_1 |
EnsemblPlantsGene:HORVU0Hr1G004830 | EnsemblPlants:HORVU0Hr1G004830.6 | InterPro:NAD(P)-bd_dom_sf | PFAM:PF00044 | PFAM:PF02800 | PRINTS:PR00078 |
ScanProsite:PS00071 | PANTHER:PTHR43148 | PANTHER:PTHR43148:SF5 | SMART:SM00846 | SUPFAM:SSF51735 | SUPFAM:SSF55347 |
TIGRFAMs:TIGR01534 | UniParc:UPI000B471EB7 | SEG:seg | : | : | : |
Description
Glyceraldehyde-3-phosphate dehydrogenase [Source:UniProtKB/TrEMBL;Acc:A0A287DVV6]
Coordinates
chrchrUn:+:27943628..27945139
Molecular Weight (calculated)
43725.5 Da
IEP (calculated)
8.568
GRAVY (calculated)
-0.017
Length
408 amino acids
Sequence
(BLAST)
(BLAST)
001: MASPMLSTAM APLQGGMLEF SGLRSSSSLP LRRNATSDDF MSAVSFRTYR RVVRWLQVST SGGSRKAPTE AKLKVAINGF GRIGRNFLRC WHGRGDSSPL
101: EVIAINDTGG VKQASHLLKY DSTLGIFDAD VKPVGDNAIS VDGKVIKVVS DRNPSNLPWG EMGIDLVIEG TGVFVDRAGA GKHLEAGAKK VLITAPGKGD
201: IPTYVCGVNA DLYTHADTII SNASCTTNCL APFVKVLDQK FGIIKGTMTT THSYTGDQRL LDASHRDLRR ARAAALNIVP TSTGAAKAVA LVLPNLKGKL
301: NGIALRVPTP NVSVVDLVVQ VSKKTLAEEV NQAFRDAAAN ELKGILDVCD EPLVSVDFRC SDVSSTIDAS LSMVMGDDMV KVIAWYDNEW GYSQRVVDLA
401: DIVANQWK
101: EVIAINDTGG VKQASHLLKY DSTLGIFDAD VKPVGDNAIS VDGKVIKVVS DRNPSNLPWG EMGIDLVIEG TGVFVDRAGA GKHLEAGAKK VLITAPGKGD
201: IPTYVCGVNA DLYTHADTII SNASCTTNCL APFVKVLDQK FGIIKGTMTT THSYTGDQRL LDASHRDLRR ARAAALNIVP TSTGAAKAVA LVLPNLKGKL
301: NGIALRVPTP NVSVVDLVVQ VSKKTLAEEV NQAFRDAAAN ELKGILDVCD EPLVSVDFRC SDVSSTIDAS LSMVMGDDMV KVIAWYDNEW GYSQRVVDLA
401: DIVANQWK
001: MNDKAIQNLI FFASNSAIHI FLYYNSLPLL LTSYNKLLSL VAMASATFSV AKPSLQGFSE FSGLRNSSAL PFAKRSSSDE FVSFVSFQTS AMRSNGGYRK
101: GVTEAKIKVA INGFGRIGRN FLRCWHGRKD SPLDVVVIND TGGVKQASHL LKYDSTLGIF DADVKPSGDS ALSVDGKIIK IVSDRNPSNL PWGELGIDLV
201: IEGTGVFVDR DGAGKHLQAG AKKVLITAPG KGDIPTYVVG VNAELYSHED TIISNASCTT NCLAPFVKVL DQKFGIIKGT MTTTHSYTGD QRLLDASHRD
301: LRRARAAALN IVPTSTGAAK AVALVLPNLK GKLNGIALRV PTPNVSVVDL VVQVSKKTFA EEVNAAFRDA AEKELKGILD VCDEPLVSVD FRCSDVSSTI
401: DSSLTMVMGD DMVKVIAWYD NEWGYSQRVV DLADIVANNW K
101: GVTEAKIKVA INGFGRIGRN FLRCWHGRKD SPLDVVVIND TGGVKQASHL LKYDSTLGIF DADVKPSGDS ALSVDGKIIK IVSDRNPSNL PWGELGIDLV
201: IEGTGVFVDR DGAGKHLQAG AKKVLITAPG KGDIPTYVVG VNAELYSHED TIISNASCTT NCLAPFVKVL DQKFGIIKGT MTTTHSYTGD QRLLDASHRD
301: LRRARAAALN IVPTSTGAAK AVALVLPNLK GKLNGIALRV PTPNVSVVDL VVQVSKKTFA EEVNAAFRDA AEKELKGILD VCDEPLVSVD FRCSDVSSTI
401: DSSLTMVMGD DMVKVIAWYD NEWGYSQRVV DLADIVANNW K
Arabidopsis Description
GAPA-2glyceraldehyde 3-phosphate dehydrogenase A subunit 2 [Source:TAIR;Acc:AT1G12900]
SUBAcon: [endoplasmic reticulum]
SUBAcon: [endoplasmic reticulum]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.