Factsheet for Bra026948.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 11

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY26599	Canola	plastid	99.0	99.0
Bra019797.1-P	Field mustard	plastid	98.0	98.0
Bra025219.1-P	Field mustard	plastid	86.97	91.32
Bra032939.1-P	Field mustard	plastid	75.19	89.82
AT1G12900.5	Thale cress	endoplasmic reticulum	96.74	87.53
KRG94751	Soybean	extracellular, nucleus	88.22	87.34
VIT_14s0068g00680.t01	Wine grape	plastid	88.22	87.13
KRH06774	Soybean	nucleus	87.97	87.1
TraesCS2D01G322900.1	Wheat	plastid	87.47	87.03
TraesCS2B01G342200.1	Wheat	plastid	87.47	87.03
TraesCS2A01G344600.1	Wheat	golgi, plastid	87.22	86.78
PGSC0003DMT400030050	Potato	cytosol	86.72	86.72
Solyc04g009030.2.1	Tomato	plastid	86.22	86.22
Zm00001d003429_P001	Maize	plastid	86.47	85.61
Os04t0459500-02	Rice	plastid	86.22	85.57
HORVU0Hr1G004830.6	Barley	plastid	87.22	85.29
Solyc02g020940.2.1	Tomato	plastid	84.71	82.64
GSMUA_Achr10P...	Banana	plastid	64.91	82.48
KXG26468	Sorghum	plastid	85.71	81.82
Zm00001d025607_P001	Maize	cytosol, plastid	75.69	81.18
Zm00001d025599_P001	Maize	plastid	80.95	80.15
Zm00001d025593_P001	Maize	plastid	80.2	79.4
GSMUA_Achr6P16250_001	Banana	plastid	84.21	76.71
KRH70104	Soybean	plastid	52.38	75.72
Bra034927.1-P	Field mustard	plastid	72.93	64.96
Bra040213.1-P	Field mustard	cytosol	39.6	46.75
Bra026904.1-P	Field mustard	cytosol	39.35	46.45
Bra016729.1-P	Field mustard	cytosol	39.35	46.31
Bra040146.1-P	Field mustard	cytosol	39.1	46.15
Bra019722.1-P	Field mustard	cytosol	32.33	43.88
Bra008416.1-P	Field mustard	plastid	44.36	42.65
Bra026068.1-P	Field mustard	plastid	43.11	40.57
Bra003606.1-P	Field mustard	plastid	43.11	40.28

Protein Annotations

KEGG:00010+1.2.1.12	KEGG:00710+1.2.1.12	MapMan:1.2.3	Gene3D:3.30.360.10	Gene3D:3.40.50.720	EnsemblPlantsGene:Bra026948
EnsemblPlants:Bra026948.1	EnsemblPlants:Bra026948.1-P	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488
GO:GO:0005975	GO:GO:0006006	GO:GO:0008150	GO:GO:0008152	GO:GO:0016491	GO:GO:0016620
GO:GO:0050661	GO:GO:0051287	GO:GO:0055114	InterPro:GlycerAld/Erythrose_P_DH	InterPro:GlycerAld_3-P_DH_AS	InterPro:GlycerAld_3-P_DH_NAD(P)-bd
InterPro:GlycerAld_3-P_DH_cat	InterPro:Glyceraldehyde-3-P_DH_1	UniProt:M4EDT8	InterPro:NAD(P)-bd_dom_sf	PFAM:PF00044	PFAM:PF02800
PIRSF:PIRSF000149	PRINTS:PR00078	ScanProsite:PS00071	PANTHER:PTHR43148	PANTHER:PTHR43148:SF5	SMART:SM00846
SUPFAM:SSF51735	SUPFAM:SSF55347	TIGRFAMs:TIGR01534	UniParc:UPI0002542F83	SEG:seg	:

Description

AT1G12900 (E=5e-198) GAPA-2 | GAPA-2 (GLYCERALDEHYDE 3-PHOSPHATE DEHYDROGENASE A SUBUNIT 2); NAD or NADH binding / binding / catalytic/ glyceraldehyde-3-phosphate dehydrogenase (phosphorylating)/ glyceraldehyde-3-phosphate dehydrogenase

Coordinates

chrA09:+:34445106..34446926

Molecular Weight (calculated)

42685.9 Da

IEP (calculated)

7.832

GRAVY (calculated)

-0.049

Length

399 amino acids

Sequence
(BLAST)

001: MASATFSVTK PSLQGFSEFS GLRNSSALPF GKKSSSDEFV SFVSFQTSAM GSNGGYRKGV TEAKLKVAIN GFGRIGRNFL RCWHGRKDSP LDVIAINDTG
101: GVKQASHLLK YDSTLGIFDA DVKPSGDSAL SVDGKIIKIV SDRNPSNLPW GELGIDLVIE GTGVFVDREG AGKHIQAGAK KVLITAPGKG DIPTYVCGVN
201: AELYSHEDTI ISNASCTTNC LAPFVKVLDQ KFGIIKGTMT TTHSYTGDQR LLDASHRDLR RARAAALNIV PTSTGAAKAV ALVLPNLKGK LNGIALRVPT
301: PNVSVVDLVV QVSKKTFAEE VNAAFRDAAA NELKGILDVC DEPLVSVDFR CSDVSSTIDS SLTMVMGDDM VKVIAWYDNE WGYSQRVVDL SDIVANNWK

Best Arabidopsis Sequence Match ( AT1G12900.5 )
(BLAST)

001: MNDKAIQNLI FFASNSAIHI FLYYNSLPLL LTSYNKLLSL VAMASATFSV AKPSLQGFSE FSGLRNSSAL PFAKRSSSDE FVSFVSFQTS AMRSNGGYRK
101: GVTEAKIKVA INGFGRIGRN FLRCWHGRKD SPLDVVVIND TGGVKQASHL LKYDSTLGIF DADVKPSGDS ALSVDGKIIK IVSDRNPSNL PWGELGIDLV
201: IEGTGVFVDR DGAGKHLQAG AKKVLITAPG KGDIPTYVVG VNAELYSHED TIISNASCTT NCLAPFVKVL DQKFGIIKGT MTTTHSYTGD QRLLDASHRD
301: LRRARAAALN IVPTSTGAAK AVALVLPNLK GKLNGIALRV PTPNVSVVDL VVQVSKKTFA EEVNAAFRDA AEKELKGILD VCDEPLVSVD FRCSDVSSTI
401: DSSLTMVMGD DMVKVIAWYD NEWGYSQRVV DLADIVANNW K

Arabidopsis Description

GAPA-2glyceraldehyde 3-phosphate dehydrogenase A subunit 2 [Source:TAIR;Acc:AT1G12900]
SUBAcon: [endoplasmic reticulum]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.