Factsheet for Bra003606.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 9
mitochondrion 2
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX67990	Canola	plastid	97.89	99.29
Bra008416.1-P	Field mustard	plastid	90.16	92.77
AT1G79530.1	Thale cress	plastid	89.93	91.0
GSMUA_Achr5P00240_001	Banana	cytosol	44.26	90.43
Bra026068.1-P	Field mustard	plastid	85.25	85.85
KRH66238	Soybean	plastid	78.92	80.62
KRH07324	Soybean	extracellular, nucleus	78.45	80.14
Solyc10g005510.2.1	Tomato	plastid	77.99	79.47
Os02t0171100-01	Rice	extracellular, plastid	76.11	79.08
PGSC0003DMT400029242	Potato	plastid	77.28	78.76
TraesCS7A01G478100.2	Wheat	plastid	75.41	78.54
TraesCS7B01G380500.1	Wheat	plastid	75.18	78.48
EES04595	Sorghum	plastid	75.88	78.45
TraesCS6D01G146900.1	Wheat	plastid	75.88	77.88
TraesCS6A01G157500.1	Wheat	plastid	75.41	77.4
HORVU6Hr1G032070.2	Barley	plastid	75.41	77.4
Os06t0666600-01	Rice	extracellular, plastid	75.18	77.35
Zm00001d015383_P001	Maize	plastid	75.88	77.33
VIT_19s0085g00600.t01	Wine grape	plastid	77.52	77.16
TraesCS6B01G185400.1	Wheat	plastid	74.94	76.92
TraesCS7D01G465500.1	Wheat	plastid	75.18	74.31
Zm00001d053798_P004	Maize	plastid	71.43	73.49
Bra040213.1-P	Field mustard	cytosol	57.14	72.19
Bra026904.1-P	Field mustard	cytosol	56.91	71.89
Bra040146.1-P	Field mustard	cytosol	56.67	71.6
Bra016729.1-P	Field mustard	cytosol	56.67	71.39
Bra019722.1-P	Field mustard	cytosol	47.78	69.39
HORVU7Hr1G108580.4	Barley	plastid	66.04	68.78
GSMUA_Achr5P00230_001	Banana	plastid	28.57	55.45
Bra019797.1-P	Field mustard	plastid	40.98	43.86
Bra025219.1-P	Field mustard	plastid	38.88	43.68
Bra026948.1-P	Field mustard	plastid	40.28	43.11
Bra034927.1-P	Field mustard	plastid	44.96	42.86
Bra032939.1-P	Field mustard	plastid	33.02	42.22
GSMUA_Achr2P02630_001	Banana	endoplasmic reticulum, extracellular	12.88	41.35

Protein Annotations

KEGG:00010+1.2.1.12	KEGG:00710+1.2.1.12	MapMan:3.12.4	Gene3D:3.30.360.10	Gene3D:3.40.50.720	EnsemblPlantsGene:Bra003606
EnsemblPlants:Bra003606.1	EnsemblPlants:Bra003606.1-P	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488
GO:GO:0005975	GO:GO:0006006	GO:GO:0008150	GO:GO:0008152	GO:GO:0016491	GO:GO:0016620
GO:GO:0050661	GO:GO:0051287	GO:GO:0055114	InterPro:GlycerAld/Erythrose_P_DH	InterPro:GlycerAld_3-P_DH_AS	InterPro:GlycerAld_3-P_DH_NAD(P)-bd
InterPro:GlycerAld_3-P_DH_cat	InterPro:Glyceraldehyde-3-P_DH_1	UniProt:M4CHC3	InterPro:NAD(P)-bd_dom_sf	PFAM:PF00044	PFAM:PF02800
PRINTS:PR00078	ScanProsite:PS00071	PANTHER:PTHR10836	PANTHER:PTHR10836:SF46	SMART:SM00846	SUPFAM:SSF51735
SUPFAM:SSF55347	TIGRFAMs:TIGR01534	UniParc:UPI00025413D7	SEG:seg	:	:

Description

AT1G79530 (E=2e-192) GAPCP-1 | GAPCP-1 (GLYCERALDEHYDE-3-PHOSPHATE DEHYDROGENASE OF PLASTID 1); NAD or NADH binding / binding / catalytic/ glyceraldehyde-3-phosphate dehydrogenase (phosphorylating)/ glyceraldehyde-3-phosphate dehydrogenase

Coordinates

chrA07:+:14031822..14034590

Molecular Weight (calculated)

45039.6 Da

IEP (calculated)

8.936

GRAVY (calculated)

-0.030

Length

427 amino acids

Sequence
(BLAST)

001: MASSSLLRSA AAAAATRADF FSSPSCDHSK VSSSSLGFSR SFSGAAIATG PSSSLQFCAK TLRCNARAVQ PIKATATQVP AAVQRSSSTG KTKVGINGFG
101: RIGRLVLRIA TSRDDIEVVA VNDPFIDAKY MAYMLRYDST HGNFKGTINV IDDSTLEING KKVNVVSKRD PAEIPWADLG ADYVVESSGV FTTLSKAASH
201: LKGGAKKVII SAPSADAPMF VVGVNEKTYQ PNMDIVSNAS CTTNCLAPLA KVVHEEFGIV EGLMTTVHAT TATQKTVDGP SMKDWRGGRG ASQNIIPSST
301: GAAKAVGKVL PELNGKLTGM AFRVPTPNVS VVDLTCRLEK GASYEDVKAA IKFAAEGPLK GILGYTDEDV VSNDFVGDSR SSIFDANAGI GLSKSFVKLV
401: SWYDNEWGYS NRVLDLIEHM ALVAASR

Best Arabidopsis Sequence Match ( AT1G79530.1 )
(BLAST)

001: MAFSSLLRSA ASYTVAAPRP DFFSSPASDH SKVLSSLGFS RNLKPSRFSS GISSSLQNGN ARSVQPIKAT ATEVPSAVRR SSSSGKTKVG INGFGRIGRL
101: VLRIATSRDD IEVVAVNDPF IDAKYMAYML KYDSTHGNFK GSINVIDDST LEINGKKVNV VSKRDPSEIP WADLGADYVV ESSGVFTTLS KAASHLKGGA
201: KKVIISAPSA DAPMFVVGVN EHTYQPNMDI VSNASCTTNC LAPLAKVVHE EFGILEGLMT TVHATTATQK TVDGPSMKDW RGGRGASQNI IPSSTGAAKA
301: VGKVLPELNG KLTGMAFRVP TSNVSVVDLT CRLEKGASYE DVKAAIKHAS EGPLKGILGY TDEDVVSNDF VGDSRSSIFD ANAGIGLSKS FVKLVSWYDN
401: EWGYSNRVLD LIEHMALVAA SH

Arabidopsis Description

GAPCP1Glyceraldehyde-3-phosphate dehydrogenase GAPCP1, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9SAJ6]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.