Subcellular Localization
min:
: max
Winner_takes_all: plastid, extracellular
Predictor Summary:
Predictor Summary:
- plastid 9
- mitochondrion 1
- cytosol 1
Predictors | GFP | MS/MS | Papers |
---|---|---|---|
extracellular:
25047395
plasma membrane: 27800704 plastid: 27992503 extracellular: 28232208 |
msms PMID:
27800704
doi
Huai'an Institute of Agricultural Sciences, Huai'an, 223001, China., Institute of Analytical Chemistry and Synthetic and Functional Biomolecules Center, College of Chemistry and Molecular Engineering, Peking University, Beijing, 100871, China; and., Northeast Institute of Geography and Agroecology, Key Laboratory of Soybean Molecular Design Breeding, Chinese Academy of Sciences, Harbin, 150081, China., State Key Laboratory of Plant Genomics, Institute of Microbiology, Chinese Academy of Sciences, Beijing, 100101, China.
msms PMID:
25047395
doi
Department of Plant Bioscience, Life and Industry Convergence Research Institute, Pusan National University, Miryang, South Korea.
msms PMID:
27992503
doi
Department of Biochemistry, Molecular Biology, Entomology and Plant Pathology, Mississippi State University, Starkville, Mississippi, United States of America., Institute of Food Crops, Jiangsu Academy of Agricultural Sciences, Jiangsu High Quality Rice Research and Development Center, Nanjing Branch of China National Center for Rice Improvement, Nanjing, Jiangsu, China.
msms PMID:
28232208
doi
Department of Plant Bioscience, Life and Industry Convergence Research Institute, Pusan National University, Miryang 627-707, South Korea., Department of Plant Bioscience, Life and Industry Convergence Research Institute, Pusan National University, Miryang 627-707, South Korea. Electronic address: stkim71@pusan.ac.kr., Department of Plant Microbe Interactions, Max Planck Institute for Plant Breeding Research, Carl-von-Linneweg 10, Cologne 50829, Germany., Division of Applied Life Science (BK21 Program), Gyeongsang National University, Jinju, South Korea., National Academy of Agricultural Science, Rural Development Administration, Suwon 441-707, South Korea. Electronic address: srpark@korea.kr., Plant Proteomics Group, Max Planck Institute for Plant Breeding Research, Carl-von-Linneweg 10, Cologne 50829, Germany., Research Laboratory for Biotechnology and Biochemistry (RLABB), GPO 13265, Kathmandu 44600, Nepal; GRADE (Global Research Arch for Developing Education) Academy, Pvt. Ltd, Adarsh Nagar-13, Birgunj 44300, Nepal., Research Laboratory for Biotechnology and Biochemistry (RLABB), GPO 13265, Kathmandu 44600, Nepal; GRADE (Global Research Arch for Developing Education) Academy, Pvt. Ltd, Adarsh Nagar-13, Birgunj 44300, Nepal; Faculty of Health and Sport Sciences, Tsukuba International Academy for Sport Studies (TIAS), University of Tsukuba, 1-1-1 Tennodai, Tsukuba, 305-8574, Ibaraki, Japan.
|
PPI
No PPI Data
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
TraesCS7B01G380500.1 | Wheat | plastid | 89.16 | 90.46 |
GSMUA_Achr5P00240_001 | Banana | cytosol | 45.54 | 90.43 |
TraesCS7A01G478100.2 | Wheat | plastid | 88.67 | 89.76 |
TraesCS7D01G465500.1 | Wheat | plastid | 88.67 | 85.19 |
Os02t0171100-01 | Rice | extracellular, plastid | 83.86 | 84.67 |
HORVU7Hr1G108580.4 | Barley | plastid | 77.83 | 78.78 |
Bra008416.1-P | Field mustard | plastid | 77.11 | 77.11 |
CDY25342 | Canola | plastid | 77.11 | 77.11 |
CDY22281 | Canola | plastid | 77.35 | 76.61 |
CDX79324 | Canola | plastid | 77.59 | 76.48 |
AT1G79530.1 | Thale cress | plastid | 77.59 | 76.3 |
CDX67990 | Canola | plastid | 77.11 | 76.01 |
AT1G16300.1 | Thale cress | plastid | 76.87 | 75.95 |
VIT_19s0085g00600.t01 | Wine grape | plastid | 78.07 | 75.52 |
KRH07324 | Soybean | extracellular, nucleus | 75.9 | 75.36 |
Solyc10g005510.2.1 | Tomato | plastid | 75.9 | 75.18 |
Bra003606.1-P | Field mustard | plastid | 77.35 | 75.18 |
Bra026068.1-P | Field mustard | plastid | 76.39 | 74.76 |
KRH66238 | Soybean | plastid | 75.18 | 74.64 |
CDY33343 | Canola | plastid | 76.39 | 74.41 |
CDY35080 | Canola | plastid | 76.14 | 74.18 |
PGSC0003DMT400029242 | Potato | plastid | 74.7 | 73.99 |
Os02t0601300-01 | Rice | plasma membrane | 59.52 | 73.29 |
Os04t0486600-01 | Rice | plastid | 59.52 | 73.29 |
Os08t0126300-01 | Rice | cytosol | 57.83 | 71.22 |
GSMUA_Achr5P00230_001 | Banana | plastid | 30.12 | 56.82 |
Os04t0459500-02 | Rice | plastid | 40.24 | 41.54 |
Os03t0129300-01 | Rice | extracellular, plastid | 42.89 | 40.09 |
GSMUA_Achr2P02630_001 | Banana | endoplasmic reticulum, extracellular | 12.77 | 39.85 |
Protein Annotations
KEGG:00010+1.2.1.12 | KEGG:00710+1.2.1.12 | MapMan:3.12.4 | Gene3D:3.30.360.10 | Gene3D:3.40.50.720 | EntrezGene:4341782 |
EMBL:AK106824 | ProteinID:BAD45405.1 | ProteinID:BAF20223.1 | ProteinID:BAS99039.1 | GO:GO:0000166 | GO:GO:0003674 |
GO:GO:0003824 | GO:GO:0005488 | GO:GO:0005975 | GO:GO:0006006 | GO:GO:0008150 | GO:GO:0008152 |
GO:GO:0016491 | GO:GO:0016620 | GO:GO:0050661 | GO:GO:0051287 | GO:GO:0055114 | InterPro:GlycerAld/Erythrose_P_DH |
InterPro:GlycerAld_3-P_DH_AS | InterPro:GlycerAld_3-P_DH_NAD(P)-bd | InterPro:GlycerAld_3-P_DH_cat | InterPro:Glyceraldehyde-3-P_DH_1 | InterPro:NAD(P)-bd_dom_sf | EnsemblPlantsGene:Os06g0666600 |
EnsemblPlants:Os06t0666600-01 | PFAM:PF00044 | PFAM:PF02800 | PRINTS:PR00078 | ScanProsite:PS00071 | PANTHER:PTHR10836 |
PANTHER:PTHR10836:SF46 | UniProt:Q655W2 | SMART:SM00846 | SUPFAM:SSF51735 | SUPFAM:SSF55347 | TIGRFAMs:TIGR01534 |
UniParc:UPI000043A2A4 | RefSeq:XP_015641029.1 | SEG:seg | : | : | : |
Description
Similar to Glyceraldehyde-3-phosphate dehydrogenase, cytosolic 3 (EC 1.2.1.12). (Os06t0666600-01)
Coordinates
chr6:-:27601270..27605299
Molecular Weight (calculated)
43496.7 Da
IEP (calculated)
8.879
GRAVY (calculated)
-0.073
Length
415 amino acids
Sequence
(BLAST)
(BLAST)
001: MASLAVPLRA SATPAIAGTG SGGGSRAADP VKVSCVRSKV TCGFPSVGAS SSLASSVEPV RATATQAPLA THQSSSTEKT KVGINGFGRI GRLVLRIATN
101: RDDIEVVAVN DPFIDAKYMA YMFKYDSTHG PFKGTIKVVD ESTLEINGKK ISVTSKRDPS DIPWGNFGAE YVVESSGVFT TTEKASAHLK GGARKVVISA
201: PSADAPMFVV GVNEKNYNPS MNVVSNASCT TNCLAPLAKI VHEEFGIAEG LMTTVHATTA TQKTVDGPSM KDWRGGRGAS QNIIPSSTGA AKAVGKVLPA
301: LNGKLTGMAF RVPTPNVSVV DLTCRLEKSA SYEDVKAAIK EASEGSLKGI LGYTDEDVVS NDFIGDTRSS IFDAKAGIGL SSSFMKLVSW YDNEWGYSNR
401: VLDLIGHMAL VNAKP
101: RDDIEVVAVN DPFIDAKYMA YMFKYDSTHG PFKGTIKVVD ESTLEINGKK ISVTSKRDPS DIPWGNFGAE YVVESSGVFT TTEKASAHLK GGARKVVISA
201: PSADAPMFVV GVNEKNYNPS MNVVSNASCT TNCLAPLAKI VHEEFGIAEG LMTTVHATTA TQKTVDGPSM KDWRGGRGAS QNIIPSSTGA AKAVGKVLPA
301: LNGKLTGMAF RVPTPNVSVV DLTCRLEKSA SYEDVKAAIK EASEGSLKGI LGYTDEDVVS NDFIGDTRSS IFDAKAGIGL SSSFMKLVSW YDNEWGYSNR
401: VLDLIGHMAL VNAKP
001: MALSSLLRSA ATSAAAPRVE LYPSSSYNHS QVTSSLGFSH SLTSSRFSGA AVSTGKYNAK RVQPIKATAT EAPPAVHRSR SSGKTKVGIN GFGRIGRLVL
101: RIATFRDDIE VVAVNDPFID AKYMAYMFKY DSTHGNYKGT INVIDDSTLE INGKQVKVVS KRDPAEIPWA DLGAEYVVES SGVFTTVGQA SSHLKGGAKK
201: VIISAPSADA PMFVVGVNEK TYLPNMDIVS NASCTTNCLA PLAKVVHEEF GILEGLMTTV HATTATQKTV DGPSMKDWRG GRGASQNIIP SSTGAAKAVG
301: KVLPELNGKL TGMAFRVPTP NVSVVDLTCR LEKDASYEDV KAAIKFASEG PLRGILGYTE EDVVSNDFLG DSRSSIFDAN AGIGLSKSFM KLVSWYDNEW
401: GYSNRVLDLI EHMALVAASR
101: RIATFRDDIE VVAVNDPFID AKYMAYMFKY DSTHGNYKGT INVIDDSTLE INGKQVKVVS KRDPAEIPWA DLGAEYVVES SGVFTTVGQA SSHLKGGAKK
201: VIISAPSADA PMFVVGVNEK TYLPNMDIVS NASCTTNCLA PLAKVVHEEF GILEGLMTTV HATTATQKTV DGPSMKDWRG GRGASQNIIP SSTGAAKAVG
301: KVLPELNGKL TGMAFRVPTP NVSVVDLTCR LEKDASYEDV KAAIKFASEG PLRGILGYTE EDVVSNDFLG DSRSSIFDAN AGIGLSKSFM KLVSWYDNEW
401: GYSNRVLDLI EHMALVAASR
Arabidopsis Description
GAPCP2Glyceraldehyde-3-phosphate dehydrogenase GAPCP2, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q5E924]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.