CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 8
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	plastid
BaCelLo:	plastid
ChloroP:	plastid
iPSORT:	mitochondrion
MultiLoc:	plastid
Predotar:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY25342	Canola	plastid	98.09	99.04
Bra008416.1-P	Field mustard	plastid	97.61	98.55
CDX79324	Canola	plastid	93.08	92.64
CDX67990	Canola	plastid	92.6	92.16
AT1G79530.1	Thale cress	plastid	91.17	90.52
GSMUA_Achr5P00240_001	Banana	cytosol	45.11	90.43
CDY35080	Canola	plastid	88.31	86.85
CDY33343	Canola	plastid	87.59	86.15
Solyc10g005510.2.1	Tomato	plastid	79.95	79.95
KRH66238	Soybean	plastid	79.71	79.9
PGSC0003DMT400029242	Potato	plastid	79.47	79.47
KRH07324	Soybean	extracellular, nucleus	79.0	79.19
TraesCS7A01G478100.2	Wheat	plastid	77.33	79.02
TraesCS7B01G380500.1	Wheat	plastid	77.09	78.97
Os02t0171100-01	Rice	extracellular, plastid	76.85	78.35
TraesCS6D01G146900.1	Wheat	plastid	77.57	78.12
VIT_19s0085g00600.t01	Wine grape	plastid	79.95	78.09
EES04595	Sorghum	plastid	76.85	77.97
TraesCS6A01G157500.1	Wheat	plastid	77.09	77.64
Os06t0666600-01	Rice	extracellular, plastid	76.61	77.35
HORVU6Hr1G032070.2	Barley	plastid	76.61	77.16
TraesCS6B01G185400.1	Wheat	plastid	76.61	77.16
Zm00001d015383_P001	Maize	plastid	76.37	76.37
TraesCS7D01G465500.1	Wheat	plastid	77.33	75.0
Zm00001d053798_P004	Maize	plastid	72.55	73.25
CDY49358	Canola	cytosol, mitochondrion	58.23	72.62
CDX92059	Canola	cytosol, endoplasmic reticulum, peroxisome	58.23	70.11
HORVU7Hr1G108580.4	Barley	plastid	68.5	70.0
CDY42906	Canola	cytosol	58.71	69.69
CDX74199	Canola	endoplasmic reticulum	58.47	69.6
CDY50169	Canola	cytosol	58.0	65.32
CDY21098	Canola	cytosol	58.0	65.15
CDX98100	Canola	cytosol, mitochondrion, peroxisome	48.93	64.47
CDY26651	Canola	mitochondrion, peroxisome	49.4	62.16
CDY30032	Canola	cytosol	58.23	62.09
CDY21135	Canola	cytosol, mitochondrion, peroxisome, plastid	49.64	61.0
CDY16090	Canola	cytoskeleton, cytosol, peroxisome	58.0	56.51
GSMUA_Achr5P00230_001	Banana	plastid	29.59	56.36
CDY29987	Canola	cytosol, peroxisome, plastid	49.4	55.05
CDY69523	Canola	cytosol	43.2	45.02
CDY19412	Canola	plastid	42.72	44.86
CDX98028	Canola	plastid	42.72	44.86
CDY28536	Canola	plastid	40.33	44.47
CDY13649	Canola	plastid	40.33	44.47
CDX83635	Canola	plastid	40.33	44.47
CDY26599	Canola	plastid	42.24	44.36
CDY16038	Canola	plastid	42.24	44.36
CDY48981	Canola	plastid	38.9	44.29
CDY35800	Canola	plastid	45.11	42.19
GSMUA_Achr2P02630_001	Banana	endoplasmic reticulum, extracellular	13.13	41.35

Protein Annotations

KEGG:00010+1.2.1.12	KEGG:00710+1.2.1.12	MapMan:3.12.4	Gene3D:3.30.360.10	Gene3D:3.40.50.720	GO:A0A078GA61
UniProt:A0A078GA61	EnsemblPlants:CDY22281	ProteinID:CDY22281	ProteinID:CDY22281.1	GO:GO:0000166	GO:GO:0003674
GO:GO:0003824	GO:GO:0005488	GO:GO:0005975	GO:GO:0006006	GO:GO:0008150	GO:GO:0008152
GO:GO:0016491	GO:GO:0016620	GO:GO:0050661	GO:GO:0051287	GO:GO:0055114	EnsemblPlantsGene:GSBRNA2T00018739001
InterPro:GlycerAld/Erythrose_P_DH	InterPro:GlycerAld_3-P_DH_AS	InterPro:GlycerAld_3-P_DH_NAD(P)-bd	InterPro:GlycerAld_3-P_DH_cat	InterPro:Glyceraldehyde-3-P_DH_1	InterPro:NAD(P)-bd_dom_sf
PFAM:PF00044	PFAM:PF02800	PRINTS:PR00078	ScanProsite:PS00071	PANTHER:PTHR10836	PANTHER:PTHR10836:SF46
MetaCyc:PWY-1042	MetaCyc:PWY-5484	MetaCyc:PWY-6901	MetaCyc:PWY-7003	SMART:SM00846	SUPFAM:SSF51735
SUPFAM:SSF55347	TIGRFAMs:TIGR01534	UniPathway:UPA00109	UniParc:UPI0004EE9275	SEG:seg	:

Description

BnaC02g25850DGlyceraldehyde-3-phosphate dehydrogenase [Source:UniProtKB/TrEMBL;Acc:A0A078GA61]

Coordinates

chrLK032129:-:481860..484920

Molecular Weight (calculated)

44379.8 Da

IEP (calculated)

9.018

GRAVY (calculated)

-0.071

Length

419 amino acids

Sequence
(BLAST)

001: MASSSLLRSA AASVTTPRAD LFSYDHSKVS ASLGFSRSFT SSRFSGVAGP SLSLQKCNAG LQPIKATATQ APPAVQRSSS TGKTKVGING FGRIGRLVLR
101: IATSRDDIDV VAVNDPFIDA KYMAYMLKYD STHGNFKGTI NVIDESTLEI NGKKVNVVSK RDPAEIPWAD LGADYVVESS GVFTTLSKAA SHLKGGAKKV
201: IISAPSADAP MFVVGVNEKT YQPNMDIVSN ASCTTNCLAP LAKVVHEEFG ILEGLMTTVH ATTATQKTVD GPSMKDWRGG RGASQNIIPS STGAAKAVGK
301: VLPELNGKLT GMAFRVPTPN VSVVDLTCRL EKGASYEDVK AAIKFASEGP LKGILGYTDE DVVSNDFVGD SRSSIFDANA GIGLSKSFVK LVSWYDNEWG
401: YSNRVLDLIE HMAMVAASR

Best Arabidopsis Sequence Match ( AT1G16300.1 )
(BLAST)

001: MALSSLLRSA ATSAAAPRVE LYPSSSYNHS QVTSSLGFSH SLTSSRFSGA AVSTGKYNAK RVQPIKATAT EAPPAVHRSR SSGKTKVGIN GFGRIGRLVL
101: RIATFRDDIE VVAVNDPFID AKYMAYMFKY DSTHGNYKGT INVIDDSTLE INGKQVKVVS KRDPAEIPWA DLGAEYVVES SGVFTTVGQA SSHLKGGAKK
201: VIISAPSADA PMFVVGVNEK TYLPNMDIVS NASCTTNCLA PLAKVVHEEF GILEGLMTTV HATTATQKTV DGPSMKDWRG GRGASQNIIP SSTGAAKAVG
301: KVLPELNGKL TGMAFRVPTP NVSVVDLTCR LEKDASYEDV KAAIKFASEG PLRGILGYTE EDVVSNDFLG DSRSSIFDAN AGIGLSKSFM KLVSWYDNEW
401: GYSNRVLDLI EHMALVAASR

Arabidopsis Description

GAPCP2Glyceraldehyde-3-phosphate dehydrogenase GAPCP2, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q5E924]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.