Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum, cytosol, peroxisome
Predictor Summary:
Predictor Summary:
- cytosol 2
- peroxisome 1
- mitochondrion 1
- endoplasmic reticulum 1
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| CDY43716 | cytosol, cytosol, mitochondrion |
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT1G13440.1 | CDY43716 | AT2G36460.1 | 23316205 |
| AT1G13440.1 | CDY43716 | AT2G36460.1 | 23316205 |
| AT3G04120.1 | CDY43716 | AT2G36460.1 | 23316205 |
| AT3G04120.1 | CDY43716 | AT2G36460.1 | 23316205 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY49358 | Canola | cytosol, mitochondrion | 95.4 | 98.81 |
| Bra040146.1-P | Field mustard | cytosol | 94.83 | 97.63 |
| CDX74199 | Canola | endoplasmic reticulum | 98.56 | 97.44 |
| AT3G04120.1 | Thale cress | cytosol | 93.39 | 96.15 |
| AT1G13440.1 | Thale cress | cytosol | 93.39 | 96.15 |
| CDY42906 | Canola | cytosol | 95.98 | 94.62 |
| Solyc05g014470.2.1 | Tomato | extracellular, plastid | 89.37 | 92.01 |
| PGSC0003DMT400044944 | Potato | extracellular | 89.37 | 92.01 |
| VIT_17s0000g10430.t01 | Wine grape | extracellular | 87.36 | 90.21 |
| Os04t0486600-01 | Rice | plastid | 86.78 | 89.61 |
| KRG97466 | Soybean | endoplasmic reticulum, nucleus | 87.36 | 89.41 |
| CDX98100 | Canola | cytosol, mitochondrion, peroxisome | 81.61 | 89.31 |
| CDY50169 | Canola | cytosol | 94.54 | 88.44 |
| KRH31426 | Soybean | endoplasmic reticulum | 86.21 | 88.24 |
| CDY21098 | Canola | cytosol | 94.54 | 88.2 |
| KRH63724 | Soybean | nucleus | 85.63 | 88.17 |
| KRH54227 | Soybean | endoplasmic reticulum, nucleus | 85.63 | 88.17 |
| Os02t0601300-01 | Rice | plasma membrane | 85.34 | 88.13 |
| KRH63725 | Soybean | endoplasmic reticulum, nucleus | 85.34 | 87.87 |
| KRH54234 | Soybean | endoplasmic reticulum, nucleus | 85.06 | 87.57 |
| TraesCS7B01G213300.1 | Wheat | golgi | 84.77 | 87.54 |
| TraesCS7D01G309500.1 | Wheat | cytosol | 84.77 | 87.54 |
| EES05377 | Sorghum | cytosol | 84.48 | 87.24 |
| TraesCS6D01G196300.2 | Wheat | golgi, nucleus | 84.2 | 86.94 |
| Zm00001d051001_P002 | Maize | cytosol | 84.2 | 86.94 |
| TraesCS6A01G213700.1 | Wheat | unclear | 83.91 | 86.65 |
| KXG24320 | Sorghum | cytosol | 83.62 | 86.35 |
| CDY26651 | Canola | mitochondrion, peroxisome | 82.18 | 85.89 |
| Zm00001d049641_P001 | Maize | plasma membrane, plastid | 83.05 | 85.76 |
| KXG20851 | Sorghum | cytosol | 83.05 | 85.76 |
| Os08t0126300-01 | Rice | cytosol | 82.76 | 85.46 |
| CDY21135 | Canola | cytosol, mitochondrion, peroxisome, plastid | 83.62 | 85.34 |
| KXG21112 | Sorghum | cytosol | 82.47 | 85.16 |
| CDY30032 | Canola | cytosol | 95.11 | 84.22 |
| OQU77090 | Sorghum | cytosol | 53.16 | 83.33 |
| Zm00001d035156_P003 | Maize | cytosol | 83.05 | 82.81 |
| TraesCS7A01G313100.1 | Wheat | cytosol | 81.9 | 82.61 |
| TraesCS6B01G243700.1 | Wheat | endoplasmic reticulum | 84.2 | 81.84 |
| HORVU6Hr1G054520.3 | Barley | cytosol, mitochondrion | 84.2 | 80.49 |
| TraesCS7B01G234400.1 | Wheat | cytosol | 78.74 | 79.88 |
| CDY29987 | Canola | cytosol, peroxisome, plastid | 83.33 | 77.13 |
| PGSC0003DMT400044945 | Potato | cytosol | 39.08 | 76.84 |
| CDY16090 | Canola | cytoskeleton, cytosol, peroxisome | 94.83 | 76.74 |
| HORVU7Hr1G074690.3 | Barley | extracellular, plasma membrane | 85.06 | 75.32 |
| GSMUA_Achr2P02600_001 | Banana | cytosol | 10.92 | 65.52 |
| GSMUA_Achr2P02610_001 | Banana | cytosol | 13.51 | 61.04 |
| CDY25342 | Canola | plastid | 70.11 | 58.8 |
| CDY22281 | Canola | plastid | 70.11 | 58.23 |
| CDX67990 | Canola | plastid | 70.11 | 57.96 |
| CDX79324 | Canola | plastid | 69.83 | 57.72 |
| Zm00001d017121_P001 | Maize | plastid | 84.48 | 57.65 |
| CDY33343 | Canola | plastid | 69.54 | 56.81 |
| CDY35080 | Canola | plastid | 69.54 | 56.81 |
| KRH37937 | Soybean | plastid | 12.36 | 48.86 |
| CDY19412 | Canola | plastid | 45.69 | 39.85 |
| CDX98028 | Canola | plastid | 45.69 | 39.85 |
| CDY69523 | Canola | cytosol | 45.98 | 39.8 |
| CDY16038 | Canola | plastid | 45.11 | 39.35 |
| CDY26599 | Canola | plastid | 44.83 | 39.1 |
| CDY28536 | Canola | plastid | 42.53 | 38.95 |
| CDX83635 | Canola | plastid | 42.53 | 38.95 |
| CDY13649 | Canola | plastid | 41.95 | 38.42 |
| CDY48981 | Canola | plastid | 39.66 | 37.5 |
| CDY35800 | Canola | plastid | 46.55 | 36.16 |
Protein Annotations
| KEGG:00010+1.2.1.12 | KEGG:00710+1.2.1.12 | MapMan:2.1.1.4.1 | Gene3D:3.30.360.10 | Gene3D:3.40.50.720 | GO:A0A078DUF1 |
| EnsemblPlants:CDX92059 | ProteinID:CDX92059 | ProteinID:CDX92059.1 | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0003824 |
| GO:GO:0005488 | GO:GO:0005975 | GO:GO:0006006 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0016620 |
| GO:GO:0050661 | GO:GO:0051287 | GO:GO:0055114 | EnsemblPlantsGene:GSBRNA2T00153727001 | InterPro:GlycerAld/Erythrose_P_DH | InterPro:GlycerAld_3-P_DH_AS |
| InterPro:GlycerAld_3-P_DH_NAD(P)-bd | InterPro:GlycerAld_3-P_DH_cat | InterPro:Glyceraldehyde-3-P_DH_1 | InterPro:NAD(P)-bd_dom_sf | PFAM:PF00044 | PFAM:PF02800 |
| PIRSF:PIRSF000149 | PRINTS:PR00078 | ScanProsite:PS00071 | PANTHER:PTHR10836 | PANTHER:PTHR10836:SF63 | MetaCyc:PWY-1042 |
| MetaCyc:PWY-5484 | MetaCyc:PWY-6901 | MetaCyc:PWY-7003 | SMART:SM00846 | SUPFAM:SSF51735 | SUPFAM:SSF55347 |
| TIGRFAMs:TIGR01534 | UniPathway:UPA00109 | UniParc:UPI0004EDBB6A | SEG:seg | : | : |
Description
BnaC03g33610D
Coordinates
chrLK031870:+:1461109..1463216
Molecular Weight (calculated)
37873.4 Da
IEP (calculated)
6.892
GRAVY (calculated)
-0.064
Length
348 amino acids
Sequence
(BLAST)
(BLAST)
001: MHSDLIVFGF VAGGKIKIGI NGFGRIGRLV ARVVLQRDDV ELVAVNDPFI TTEYMTYMFK YDSVHGQWKH NELKVKDEKT LLFGEKPVTV FGIRNPEDIP
101: WGEAGADFVV ESTGVFTDKD KAAAHLKGGA KKVVISAPSK DAPMFVVGVN EHEYKSDLDI VSNASCTTNC LAPLAKVIND RFGIVEGLMT TVHSITATQK
201: TVDGPSMKDW RGGRAASFNI IPSSTGAAKA VGKVLPQLNG KLTGMSFRVP TVDVSVVDLT VRLEKAATYD QIKKAIKEES EGKLKGILGY TEDDVVSTDF
301: IGDSRSSIFD AKAGIALSDN FVKLVSWYDN EWGYSTRVVD LIVHMSKA
101: WGEAGADFVV ESTGVFTDKD KAAAHLKGGA KKVVISAPSK DAPMFVVGVN EHEYKSDLDI VSNASCTTNC LAPLAKVIND RFGIVEGLMT TVHSITATQK
201: TVDGPSMKDW RGGRAASFNI IPSSTGAAKA VGKVLPQLNG KLTGMSFRVP TVDVSVVDLT VRLEKAATYD QIKKAIKEES EGKLKGILGY TEDDVVSTDF
301: IGDSRSSIFD AKAGIALSDN FVKLVSWYDN EWGYSTRVVD LIVHMSKA
001: MADKKIRIGI NGFGRIGRLV ARVVLQRDDV ELVAVNDPFI TTEYMTYMFK YDSVHGQWKH HELKVKDDKT LLFGEKPVTV FGIRNPEDIP WGEAGADFVV
101: ESTGVFTDKD KAAAHLKGGA KKVVISAPSK DAPMFVVGVN EHEYKSDLDI VSNASCTTNC LAPLAKVIND RFGIVEGLMT TVHSITATQK TVDGPSMKDW
201: RGGRAASFNI IPSSTGAAKA VGKVLPSLNG KLTGMSFRVP TVDVSVVDLT VRLEKAATYD EIKKAIKEES EGKMKGILGY TEDDVVSTDF VGDNRSSIFD
301: AKAGIALSDK FVKLVSWYDN EWGYSSRVVD LIVHMSKA
101: ESTGVFTDKD KAAAHLKGGA KKVVISAPSK DAPMFVVGVN EHEYKSDLDI VSNASCTTNC LAPLAKVIND RFGIVEGLMT TVHSITATQK TVDGPSMKDW
201: RGGRAASFNI IPSSTGAAKA VGKVLPSLNG KLTGMSFRVP TVDVSVVDLT VRLEKAATYD EIKKAIKEES EGKMKGILGY TEDDVVSTDF VGDNRSSIFD
301: AKAGIALSDK FVKLVSWYDN EWGYSSRVVD LIVHMSKA
Arabidopsis Description
GAPC2Glyceraldehyde-3-phosphate dehydrogenase GAPC2, cytosolic [Source:UniProtKB/Swiss-Prot;Acc:Q9FX54]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.