Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- extracellular 2
- endoplasmic reticulum 2
- vacuole 2
- plasma membrane 2
- golgi 2
- plastid 2
- mitochondrion 2
- cytosol 3
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| GSMUA_Achr11P... | cytosol, cytosol, mitochondrion |
| GSMUA_Achr11P... | cytosol, cytosol, mitochondrion |
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH37937 | Soybean | plastid | 37.93 | 25.0 |
| GSMUA_Achr5P00240_001 | Banana | cytosol | 75.86 | 21.05 |
| PGSC0003DMT400044945 | Potato | cytosol | 58.62 | 19.21 |
| VIT_01s0010g02460.t01 | Wine grape | cytosol | 68.97 | 11.76 |
| Bra026904.1-P | Field mustard | cytosol | 65.52 | 11.24 |
| Bra040213.1-P | Field mustard | cytosol | 65.52 | 11.24 |
| GSMUA_Achr8P33500_001 | Banana | plastid | 82.76 | 11.19 |
| GSMUA_Achr7P03580_001 | Banana | plastid | 81.03 | 10.96 |
| AT3G04120.1 | Thale cress | cytosol | 63.79 | 10.95 |
| Solyc05g014470.2.1 | Tomato | extracellular, plastid | 63.79 | 10.95 |
| PGSC0003DMT400044944 | Potato | extracellular | 63.79 | 10.95 |
| AT1G13440.1 | Thale cress | cytosol | 63.79 | 10.95 |
| CDX92059 | Canola | cytosol, endoplasmic reticulum, peroxisome | 65.52 | 10.92 |
| Bra016729.1-P | Field mustard | cytosol | 63.79 | 10.91 |
| GSMUA_Achr5P17220_001 | Banana | extracellular | 20.69 | 10.91 |
| CDX74199 | Canola | endoplasmic reticulum | 65.52 | 10.8 |
| CDY49358 | Canola | cytosol, mitochondrion | 62.07 | 10.71 |
| Bra019722.1-P | Field mustard | cytosol | 53.45 | 10.54 |
| CDY42906 | Canola | cytosol | 63.79 | 10.48 |
| GSMUA_Achr9P02180_001 | Banana | endoplasmic reticulum | 65.52 | 10.38 |
| Bra040146.1-P | Field mustard | cytosol | 60.34 | 10.36 |
| GSMUA_Achr11P... | Banana | cytosol | 60.34 | 10.14 |
| CDY50169 | Canola | cytosol | 63.79 | 9.95 |
| CDY21098 | Canola | cytosol | 63.79 | 9.92 |
| GSMUA_AchrUn_... | Banana | endoplasmic reticulum | 60.34 | 9.75 |
| CDX98100 | Canola | cytosol, mitochondrion, peroxisome | 53.45 | 9.75 |
| GSMUA_Achr5P25410_001 | Banana | unclear | 65.52 | 9.64 |
| CDY26651 | Canola | mitochondrion, peroxisome | 55.17 | 9.61 |
| CDY30032 | Canola | cytosol | 63.79 | 9.41 |
| CDY21135 | Canola | cytosol, mitochondrion, peroxisome, plastid | 55.17 | 9.38 |
| GSMUA_Achr11P... | Banana | mitochondrion | 65.52 | 9.09 |
| GSMUA_Achr11P... | Banana | plasma membrane | 62.07 | 8.96 |
| CDY16090 | Canola | cytoskeleton, cytosol, peroxisome | 65.52 | 8.84 |
| CDY29987 | Canola | cytosol, peroxisome, plastid | 53.45 | 8.24 |
| GSMUA_Achr11P... | Banana | mitochondrion | 43.1 | 6.36 |
| GSMUA_Achr6P16250_001 | Banana | plastid | 43.1 | 5.71 |
| GSMUA_Achr11P... | Banana | plastid | 39.66 | 5.09 |
| GSMUA_Achr10P... | Banana | plastid | 17.24 | 3.18 |
| GSMUA_Achr2P02630_001 | Banana | endoplasmic reticulum, extracellular | 3.45 | 1.5 |
| GSMUA_Achr5P00230_001 | Banana | plastid | 5.17 | 1.36 |
| GSMUA_Achr2P02610_001 | Banana | cytosol | 0.0 | 0.0 |
Protein Annotations
| EnsemblPlants:GSMUA_Achr2P02600_001 | EnsemblPlants:GSMUA_Achr2T02600_001 | EnsemblPlantsGene:GSMUA_Achr2G02600_001 | Gene3D:3.30.360.10 | GO:GO:0003674 | GO:GO:0003824 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0016620 | GO:GO:0055114 | InterPro:GlycerAld/Erythrose_P_DH | InterPro:GlycerAld_3-P_DH_cat |
| PANTHER:PTHR10836 | PANTHER:PTHR10836:SF46 | PFAM:PF02800 | SUPFAM:SSF55347 | UniParc:UPI0002969A20 | UniProt:M0S4K1 |
| MapMan:35.1 | : | : | : | : | : |
Description
Glyceraldehyde-3-phosphate dehydrogenase [Source:GMGC_GENE;Acc:GSMUA_Achr2G02600_001]
Coordinates
chr2:-:8374892..8375318
Molecular Weight (calculated)
5928.9 Da
IEP (calculated)
3.911
GRAVY (calculated)
0.081
Length
58 amino acids
Sequence
(BLAST)
(BLAST)
1: MAFRVSTPNV SVVDLTCGLA SYDGVKAAIK CASEGSPKGI LGFTDEDDVS NDFIGDSG
001: MALSSLLRSA ATSAAAPRVE LYPSSSYNHS QVTSSLGFSH SLTSSRFSGA AVSTGKYNAK RVQPIKATAT EAPPAVHRSR SSGKTKVGIN GFGRIGRLVL
101: RIATFRDDIE VVAVNDPFID AKYMAYMFKY DSTHGNYKGT INVIDDSTLE INGKQVKVVS KRDPAEIPWA DLGAEYVVES SGVFTTVGQA SSHLKGGAKK
201: VIISAPSADA PMFVVGVNEK TYLPNMDIVS NASCTTNCLA PLAKVVHEEF GILEGLMTTV HATTATQKTV DGPSMKDWRG GRGASQNIIP SSTGAAKAVG
301: KVLPELNGKL TGMAFRVPTP NVSVVDLTCR LEKDASYEDV KAAIKFASEG PLRGILGYTE EDVVSNDFLG DSRSSIFDAN AGIGLSKSFM KLVSWYDNEW
401: GYSNRVLDLI EHMALVAASR
101: RIATFRDDIE VVAVNDPFID AKYMAYMFKY DSTHGNYKGT INVIDDSTLE INGKQVKVVS KRDPAEIPWA DLGAEYVVES SGVFTTVGQA SSHLKGGAKK
201: VIISAPSADA PMFVVGVNEK TYLPNMDIVS NASCTTNCLA PLAKVVHEEF GILEGLMTTV HATTATQKTV DGPSMKDWRG GRGASQNIIP SSTGAAKAVG
301: KVLPELNGKL TGMAFRVPTP NVSVVDLTCR LEKDASYEDV KAAIKFASEG PLRGILGYTE EDVVSNDFLG DSRSSIFDAN AGIGLSKSFM KLVSWYDNEW
401: GYSNRVLDLI EHMALVAASR
Arabidopsis Description
GAPCP2Glyceraldehyde-3-phosphate dehydrogenase GAPCP2, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q5E924]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.