Factsheet for GSMUA_Achr5P17220_001

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

plastid 3
extracellular 5
endoplasmic reticulum 2
vacuole 2
plasma membrane 2
golgi 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	mitochondrion, plastid, secretory
BaCelLo:	plastid
EpiLoc:	plastid
iPSORT:	secretory
MultiLoc:	extracellular
Plant-mPloc:	plastid
Predotar:	mitochondrion
PProwler:	secretory
WoLF PSORT:	extracellular
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KXG19697	Sorghum	cytosol	36.36	41.24
VIT_14s0006g03030.t01	Wine grape	extracellular	21.82	26.67
GSMUA_Achr2P02610_001	Banana	cytosol	18.18	25.97
KXG28726	Sorghum	cytosol	33.64	24.34
GSMUA_Achr5P00240_001	Banana	cytosol	40.91	21.53
GSMUA_Achr2P02600_001	Banana	cytosol	10.91	20.69
Solyc01g098950.1.1	Tomato	cytosol	45.45	17.99
GSMUA_Achr9P02180_001	Banana	endoplasmic reticulum	51.82	15.57
GSMUA_Achr11P...	Banana	cytosol	48.18	15.36
GSMUA_AchrUn_...	Banana	endoplasmic reticulum	48.18	14.76
PGSC0003DMT400010575	Potato	cytosol	44.55	14.54
GSMUA_Achr5P25410_001	Banana	unclear	48.18	13.45
GSMUA_Achr11P...	Banana	plasma membrane	49.09	13.43
GSMUA_Achr11P...	Banana	mitochondrion	50.0	13.16
GSMUA_Achr8P33500_001	Banana	plastid	42.73	10.96
Solyc03g111000.2.1	Tomato	cytosol	17.27	10.92
GSMUA_Achr7P03580_001	Banana	plastid	41.82	10.72
GSMUA_Achr10P...	Banana	plastid	20.91	7.32
GSMUA_Achr11P...	Banana	mitochondrion	23.64	6.62
GSMUA_Achr6P16250_001	Banana	plastid	25.45	6.39
GSMUA_Achr11P...	Banana	plastid	24.55	5.97
GSMUA_Achr5P00230_001	Banana	plastid	1.82	0.91
HORVU2Hr1G123170.1	Barley	cytosol	0.0	0.0
HORVU2Hr1G123240.1	Barley	cytosol	0.0	0.0
HORVU6Hr1G089870.1	Barley	cytosol	0.0	0.0
GSMUA_Achr2P02630_001	Banana	endoplasmic reticulum, extracellular	0.0	0.0

Protein Annotations

Gene3D:3.30.360.10	MapMan:35.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575	GO:GO:0008150
GO:GO:0008152	GO:GO:0016020	GO:GO:0016021	GO:GO:0016620	GO:GO:0055114	EnsemblPlantsGene:GSMUA_Achr5G17220_001
EnsemblPlants:GSMUA_Achr5P17220_001	EnsemblPlants:GSMUA_Achr5T17220_001	InterPro:GlycerAld/Erythrose_P_DH	InterPro:GlycerAld_3-P_DH_cat	UniProt:M0SZA1	PFAM:PF02800
PANTHER:PTHR10836	PANTHER:PTHR10836:SF63	SUPFAM:SSF55347	TMHMM:TMhelix	UniParc:UPI0002950BBA	SEG:seg

Description

glyceraldehyde-3-phosphate dehydrogenase, putative, expressed [Source:GMGC_GENE;Acc:GSMUA_Achr5G17220_001]

Coordinates

chr5:-:16212906..16213774

Molecular Weight (calculated)

12082.0 Da

IEP (calculated)

9.377

GRAVY (calculated)

0.581

Length

110 amino acids

Sequence
(BLAST)

001: MLLARMPKQL ELISSSTILL FCLSATQKPV DGPSSKDWRG GRAASFNIIP SSSGAAKVCS SKLYLLCFFD VFLLILFFIL FALELSFCGS HLTVRIEKAA
101: TYDQIKAAIK

Best Arabidopsis Sequence Match ( AT1G13440.2 )
(BLAST)

001: MADKKIRIGI NGFGRIGRLV ARVVLQRDDV ELVAVNDPFI TTEYMTYMFK YDSVHGQWKH HELKVKDDKT LLFGEKPVTV FGIRNPEDIP WGEAGADFVV
101: ESTGVFTDKD KAAAHLKGGA KKVVISAPSK DAPMFVVGVN EHEFGIVEGL MTTVHSITAT QKTVDGPSMK DWRGGRAASF NIIPSSTGAA KAVGKVLPSL
201: NGKLTGMSFR VPTVDVSVVD LTVRLEKAAT YDEIKKAIKE ESEGKMKGIL GYTEDDVVST DFVGDNRSSI FDAKAGIALS DKFVKLVSWY DNEWGYSSRV
301: VDLIVHMSKA

Arabidopsis Description

GAPC2Glyceraldehyde-3-phosphate dehydrogenase GAPC2, cytosolic [Source:UniProtKB/Swiss-Prot;Acc:Q9FX54]
SUBAcon: [mitochondrion,peroxisome,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.