Factsheet for GSMUA_Achr9P02180_001

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum

Predictor Summary:

extracellular 5
endoplasmic reticulum 7
vacuole 5
plasma membrane 5
golgi 5
cytosol 2
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum
Any Predictor:	cytosol, plastid, secretory
BaCelLo:	secretory
EpiLoc:	cytosol
iPSORT:	secretory
MultiLoc:	endoplasmic reticulum
Plant-mPloc:	cytosol
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	endoplasmic reticulum

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr11P...	Banana	cytosol	84.43	89.57
GSMUA_AchrUn_...	Banana	endoplasmic reticulum	83.61	85.24
GSMUA_Achr5P25410_001	Banana	unclear	84.97	78.93
GSMUA_Achr5P00240_001	Banana	cytosol	44.81	78.47
GSMUA_Achr11P...	Banana	plasma membrane	84.15	76.62
GSMUA_Achr11P...	Banana	mitochondrion	75.14	65.79
GSMUA_Achr2P02600_001	Banana	cytosol	10.38	65.52
GSMUA_Achr2P02610_001	Banana	cytosol	13.11	62.34
GSMUA_Achr8P33500_001	Banana	plastid	68.31	58.28
GSMUA_Achr7P03580_001	Banana	plastid	67.49	57.58
GSMUA_Achr5P17220_001	Banana	extracellular	15.57	51.82
GSMUA_Achr11P...	Banana	mitochondrion	45.36	42.24
GSMUA_Achr10P...	Banana	plastid	34.43	40.13
GSMUA_Achr6P16250_001	Banana	plastid	45.36	37.9
GSMUA_Achr11P...	Banana	plastid	45.08	36.5
GSMUA_Achr5P00230_001	Banana	plastid	21.04	35.0
GSMUA_Achr2P02630_001	Banana	endoplasmic reticulum, extracellular	9.56	26.32

Protein Annotations

KEGG:00010+1.2.1.12	KEGG:00710+1.2.1.12	MapMan:2.1.1.4.1	Gene3D:3.30.360.10	Gene3D:3.40.50.720	GO:GO:0000166
GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0005575	GO:GO:0005975	GO:GO:0006006
GO:GO:0008150	GO:GO:0008152	GO:GO:0016020	GO:GO:0016021	GO:GO:0016491	GO:GO:0016620
GO:GO:0050661	GO:GO:0051287	GO:GO:0055114	EnsemblPlantsGene:GSMUA_Achr9G02180_001	EnsemblPlants:GSMUA_Achr9P02180_001	EnsemblPlants:GSMUA_Achr9T02180_001
InterPro:GlycerAld/Erythrose_P_DH	InterPro:GlycerAld_3-P_DH_AS	InterPro:GlycerAld_3-P_DH_NAD(P)-bd	InterPro:GlycerAld_3-P_DH_cat	InterPro:Glyceraldehyde-3-P_DH_1	UniProt:M0TWS5
InterPro:NAD(P)-bd_dom_sf	PFAM:PF00044	PFAM:PF02800	PIRSF:PIRSF000149	PRINTS:PR00078	ScanProsite:PS00071
PANTHER:PTHR10836	PANTHER:PTHR10836:SF63	SMART:SM00846	SUPFAM:SSF51735	SUPFAM:SSF55347	TIGRFAMs:TIGR01534
TMHMM:TMhelix	UniParc:UPI000296E765	SEG:seg	:	:	:

Description

Glyceraldehyde-3-phosphate dehydrogenase, cytosolic [Source:GMGC_GENE;Acc:GSMUA_Achr9G02180_001]

Coordinates

chr9:+:1607760..1611933

Molecular Weight (calculated)

39978.2 Da

IEP (calculated)

7.632

GRAVY (calculated)

0.043

Length

366 amino acids

Sequence
(BLAST)

001: MGKTVFLPFT SFILLVFYLA CDLICWLGFV GKIKIGINGF GRIGRLVARV ALQSSDVELV AVNDPFITTD YMTYMFKYDT VHGQWKHHDV KVKDSKTLLF
101: GEKEVTVFGL RNPEEIPWGE TGAEYVVEST GVFTDKDKAA AHLKGGAKKV IISAPSKDAP MFVVGVNEHE YKPDIDIVSN ASCTTNCLAP LAKVVHDRFG
201: IIEGLMTTVH AITATQKTVD GPSSKDWRGG RAASFNIIPS STGAAKAVGK VLPALNGKLT GMAFRVPTVN VSVVDLTVRI EKAATYDQIK AAIKEESEGK
301: LKGILGYADE DLVSMDFVGD NRSSIFDAKA GISLNEHFVK LVAWYDNEWG YSSRVVDLIR HMATTK

Best Arabidopsis Sequence Match ( AT1G13440.1 )
(BLAST)

001: MADKKIRIGI NGFGRIGRLV ARVVLQRDDV ELVAVNDPFI TTEYMTYMFK YDSVHGQWKH HELKVKDDKT LLFGEKPVTV FGIRNPEDIP WGEAGADFVV
101: ESTGVFTDKD KAAAHLKGGA KKVVISAPSK DAPMFVVGVN EHEYKSDLDI VSNASCTTNC LAPLAKVIND RFGIVEGLMT TVHSITATQK TVDGPSMKDW
201: RGGRAASFNI IPSSTGAAKA VGKVLPSLNG KLTGMSFRVP TVDVSVVDLT VRLEKAATYD EIKKAIKEES EGKMKGILGY TEDDVVSTDF VGDNRSSIFD
301: AKAGIALSDK FVKLVSWYDN EWGYSSRVVD LIVHMSKA

Arabidopsis Description

GAPC2Glyceraldehyde-3-phosphate dehydrogenase GAPC2, cytosolic [Source:UniProtKB/Swiss-Prot;Acc:Q9FX54]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.