Factsheet for GSMUA_Achr8P33500_001

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 7
mitochondrion 3
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr5P00240_001	Banana	cytosol	45.45	93.3
GSMUA_Achr7P03580_001	Banana	plastid	89.04	89.04
GSMUA_Achr2P02600_001	Banana	cytosol	11.19	82.76
GSMUA_Achr11P...	Banana	cytosol	57.58	71.59
GSMUA_Achr2P02610_001	Banana	cytosol	12.82	71.43
GSMUA_Achr9P02180_001	Banana	endoplasmic reticulum	58.28	68.31
GSMUA_Achr5P00230_001	Banana	plastid	34.73	67.73
GSMUA_AchrUn_...	Banana	endoplasmic reticulum	56.64	67.69
GSMUA_Achr5P25410_001	Banana	unclear	57.81	62.94
GSMUA_Achr11P...	Banana	plasma membrane	57.34	61.19
GSMUA_Achr11P...	Banana	mitochondrion	52.21	53.59
GSMUA_Achr11P...	Banana	mitochondrion	39.63	43.26
GSMUA_Achr10P...	Banana	plastid	31.47	42.99
GSMUA_Achr2P02630_001	Banana	endoplasmic reticulum, extracellular	13.29	42.86
GSMUA_Achr5P17220_001	Banana	extracellular	10.96	42.73
GSMUA_Achr11P...	Banana	plastid	41.03	38.94
GSMUA_Achr6P16250_001	Banana	plastid	38.46	37.67

Protein Annotations

KEGG:00010+1.2.1.12	KEGG:00710+1.2.1.12	MapMan:3.12.4	Gene3D:3.30.360.10	Gene3D:3.40.50.720	GO:GO:0000166
GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0005975	GO:GO:0006006	GO:GO:0008150
GO:GO:0008152	GO:GO:0016491	GO:GO:0016620	GO:GO:0050661	GO:GO:0051287	GO:GO:0055114
EnsemblPlantsGene:GSMUA_Achr8G33500_001	EnsemblPlants:GSMUA_Achr8P33500_001	EnsemblPlants:GSMUA_Achr8T33500_001	InterPro:GlycerAld/Erythrose_P_DH	InterPro:GlycerAld_3-P_DH_AS	InterPro:GlycerAld_3-P_DH_NAD(P)-bd
InterPro:GlycerAld_3-P_DH_cat	InterPro:Glyceraldehyde-3-P_DH_1	UniProt:M0TVV2	InterPro:NAD(P)-bd_dom_sf	PFAM:PF00044	PFAM:PF02800
PRINTS:PR00078	ScanProsite:PS00071	PANTHER:PTHR10836	PANTHER:PTHR10836:SF46	SMART:SM00846	SUPFAM:SSF51735
SUPFAM:SSF55347	TIGRFAMs:TIGR01534	UniParc:UPI000295350E	SEG:seg	:	:

Description

Glyceraldehyde-3-phosphate dehydrogenase, cytosolic [Source:GMGC_GENE;Acc:GSMUA_Achr8G33500_001]

Coordinates

chr8:+:34536704..34543509

Molecular Weight (calculated)

45367.2 Da

IEP (calculated)

9.263

GRAVY (calculated)

-0.085

Length

429 amino acids

Sequence
(BLAST)

001: MAFSSLLRSA TSALGGSRDC FPSGCGTLAP ASFKISCVGS PKSVEIRSGV LGSALPSVEA NSSQRSRARG IQPVKATATE VPPAVRRSSS GGRTKIGING
101: FGRIGRLVLR IATTRDDVEV VAVNDPFIDA KYMAYMLKYD STHGNFKGTI KVVDGSNLEI NGKRIAVTSK RDPAEIPWGD FGAEYVVESS GVFTTMDKAS
201: AHLKGGAKKV VISAPSADAP MFVVGVNEKN YKSNMNIVSN ASCTTNCLAP LAMVVHEEFG IVEGLMTTVH ATTATQKTVD GPSMKDWRGG RGAGQNIIPS
301: STGAAKAVGK VLPELNGKLT GMAFRVPTPN VSVVDLTCRL EKNASYDDVK AAIKYASEGP LKGILGYTDE DVVSNDFVGD SRSSIFDAKA GIGLSASFMK
401: FVSWYDNEWG YSNRVLDLIE HMALVSAKH

Best Arabidopsis Sequence Match ( AT1G79530.1 )
(BLAST)

001: MAFSSLLRSA ASYTVAAPRP DFFSSPASDH SKVLSSLGFS RNLKPSRFSS GISSSLQNGN ARSVQPIKAT ATEVPSAVRR SSSSGKTKVG INGFGRIGRL
101: VLRIATSRDD IEVVAVNDPF IDAKYMAYML KYDSTHGNFK GSINVIDDST LEINGKKVNV VSKRDPSEIP WADLGADYVV ESSGVFTTLS KAASHLKGGA
201: KKVIISAPSA DAPMFVVGVN EHTYQPNMDI VSNASCTTNC LAPLAKVVHE EFGILEGLMT TVHATTATQK TVDGPSMKDW RGGRGASQNI IPSSTGAAKA
301: VGKVLPELNG KLTGMAFRVP TSNVSVVDLT CRLEKGASYE DVKAAIKHAS EGPLKGILGY TDEDVVSNDF VGDSRSSIFD ANAGIGLSKS FVKLVSWYDN
401: EWGYSNRVLD LIEHMALVAA SH

Arabidopsis Description

GAPCP1Glyceraldehyde-3-phosphate dehydrogenase GAPCP1, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9SAJ6]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.