Factsheet for GSMUA_Achr7P03580_001

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 7
mitochondrion 2
cytosol 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr5P00240_001	Banana	cytosol	45.22	92.82
GSMUA_Achr8P33500_001	Banana	plastid	89.04	89.04
GSMUA_Achr2P02600_001	Banana	cytosol	10.96	81.03
GSMUA_Achr2P02610_001	Banana	cytosol	13.52	75.32
GSMUA_Achr11P...	Banana	cytosol	56.88	70.72
GSMUA_Achr5P00230_001	Banana	plastid	35.2	68.64
GSMUA_Achr9P02180_001	Banana	endoplasmic reticulum	57.58	67.49
GSMUA_AchrUn_...	Banana	endoplasmic reticulum	55.94	66.85
GSMUA_Achr5P25410_001	Banana	unclear	56.88	61.93
GSMUA_Achr11P...	Banana	plasma membrane	56.64	60.45
GSMUA_Achr11P...	Banana	mitochondrion	51.52	52.87
GSMUA_Achr2P02630_001	Banana	endoplasmic reticulum, extracellular	13.99	45.11
GSMUA_Achr10P...	Banana	plastid	32.17	43.95
GSMUA_Achr11P...	Banana	mitochondrion	39.39	43.0
GSMUA_Achr5P17220_001	Banana	extracellular	10.72	41.82
GSMUA_Achr11P...	Banana	plastid	41.03	38.94
GSMUA_Achr6P16250_001	Banana	plastid	39.16	38.36

Protein Annotations

KEGG:00010+1.2.1.12	KEGG:00710+1.2.1.12	MapMan:3.12.4	Gene3D:3.30.360.10	Gene3D:3.40.50.720	GO:GO:0000166
GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0005975	GO:GO:0006006	GO:GO:0008150
GO:GO:0008152	GO:GO:0016491	GO:GO:0016620	GO:GO:0050661	GO:GO:0051287	GO:GO:0055114
EnsemblPlantsGene:GSMUA_Achr7G03580_001	EnsemblPlants:GSMUA_Achr7P03580_001	EnsemblPlants:GSMUA_Achr7T03580_001	InterPro:GlycerAld/Erythrose_P_DH	InterPro:GlycerAld_3-P_DH_AS	InterPro:GlycerAld_3-P_DH_NAD(P)-bd
InterPro:GlycerAld_3-P_DH_cat	InterPro:Glyceraldehyde-3-P_DH_1	UniProt:M0TEE8	InterPro:NAD(P)-bd_dom_sf	PFAM:PF00044	PFAM:PF02800
PRINTS:PR00078	ScanProsite:PS00071	PANTHER:PTHR10836	PANTHER:PTHR10836:SF46	SMART:SM00846	SUPFAM:SSF51735
SUPFAM:SSF55347	TIGRFAMs:TIGR01534	UniParc:UPI0002961D00	SEG:seg	:	:

Description

Glyceraldehyde-3-phosphate dehydrogenase [Source:GMGC_GENE;Acc:GSMUA_Achr7G03580_001]

Coordinates

chr7:+:2824984..2832577

Molecular Weight (calculated)

45616.5 Da

IEP (calculated)

9.729

GRAVY (calculated)

-0.120

Length

429 amino acids

Sequence
(BLAST)

001: MAFSTLLRSA APALGGSRDR FPSDSGAPIP PSFKISCIRS PRSAGNRSSI FGSSFPSVEA YSSQRSGARN NQPIKATATE APPFVKSSPS GGRTKVGING
101: FGRIGRLVLR IATTRDDIEV VAVNDPFIDA KYMAYMLKYD STHGIFKGTI KVVDGSTLEI NGKRIAVTSK RDPAVIPWGD FGAEFVVESS GVFTTMDKAS
201: AHLKGGAKKV VISAPSVDAP MFVVGVNEKN YKPNMNVVSN ASCTTNCLAP LAKVVHEEFG IVEGLMTTVH ATTATQKTVD GPSMKDWRGG RGAGQNIIPS
301: STGAAKAVGK VLPELNGKLT GMAFRVPTPN VSVVDLTCRL EKSASYDDVK ASIKYASEGP LKGILGYTDE DVVSNDFVGD SRSSIFDAKA GIGLSASFMK
401: LVTWYDNEWG YSNRVLDLIE HMVLVNAKH

Best Arabidopsis Sequence Match ( AT1G16300.1 )
(BLAST)

001: MALSSLLRSA ATSAAAPRVE LYPSSSYNHS QVTSSLGFSH SLTSSRFSGA AVSTGKYNAK RVQPIKATAT EAPPAVHRSR SSGKTKVGIN GFGRIGRLVL
101: RIATFRDDIE VVAVNDPFID AKYMAYMFKY DSTHGNYKGT INVIDDSTLE INGKQVKVVS KRDPAEIPWA DLGAEYVVES SGVFTTVGQA SSHLKGGAKK
201: VIISAPSADA PMFVVGVNEK TYLPNMDIVS NASCTTNCLA PLAKVVHEEF GILEGLMTTV HATTATQKTV DGPSMKDWRG GRGASQNIIP SSTGAAKAVG
301: KVLPELNGKL TGMAFRVPTP NVSVVDLTCR LEKDASYEDV KAAIKFASEG PLRGILGYTE EDVVSNDFLG DSRSSIFDAN AGIGLSKSFM KLVSWYDNEW
401: GYSNRVLDLI EHMALVAASR

Arabidopsis Description

GAPCP2Glyceraldehyde-3-phosphate dehydrogenase GAPCP2, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q5E924]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.