Factsheet for GSMUA_Achr11P19110_001

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 3
cytosol 2
mitochondrion 4
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	cytosol, mitochondrion, plastid, secretory
BaCelLo:	plastid
EpiLoc:	cytosol
iPSORT:	plastid
MultiLoc:	mitochondrion
Plant-mPloc:	cytosol
Predotar:	mitochondrion
PProwler:	secretory
TargetP:	mitochondrion
WoLF PSORT:	plastid
YLoc:	mitochondrion

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr11P...	Banana	cytosol	67.7	82.03
VIT_14s0171g00440.t01	Wine grape	cytosol	63.4	78.64
KRG94350	Soybean	cytosol, mitochondrion	62.92	78.04
GSMUA_AchrUn_...	Banana	endoplasmic reticulum	66.99	77.99
KRH57621	Soybean	endoplasmic reticulum	62.44	77.45
GSMUA_Achr5P00240_001	Banana	cytosol	37.8	75.6
GSMUA_Achr9P02180_001	Banana	endoplasmic reticulum	65.79	75.14
GSMUA_Achr11P...	Banana	plasma membrane	68.66	71.39
GSMUA_Achr5P25410_001	Banana	unclear	66.99	71.07
GSMUA_Achr2P02600_001	Banana	cytosol	9.09	65.52
GSMUA_Achr2P02610_001	Banana	cytosol	11.0	59.74
GSMUA_Achr8P33500_001	Banana	plastid	53.59	52.21
GSMUA_Achr7P03580_001	Banana	plastid	52.87	51.52
GSMUA_Achr5P17220_001	Banana	extracellular	13.16	50.0
GSMUA_Achr11P...	Banana	mitochondrion	34.69	36.9
GSMUA_Achr10P...	Banana	plastid	25.6	34.08
GSMUA_Achr6P16250_001	Banana	plastid	33.97	32.42
GSMUA_Achr11P...	Banana	plastid	33.97	31.42
GSMUA_Achr5P00230_001	Banana	plastid	12.92	24.55
GSMUA_Achr2P02630_001	Banana	endoplasmic reticulum, extracellular	3.83	12.03

Protein Annotations

KEGG:00010+1.2.1.12	KEGG:00710+1.2.1.12	MapMan:2.1.1.4.1	Gene3D:3.30.360.10	Gene3D:3.40.50.720	GO:GO:0000166
GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0005575	GO:GO:0005975	GO:GO:0006006
GO:GO:0008150	GO:GO:0008152	GO:GO:0016020	GO:GO:0016021	GO:GO:0016491	GO:GO:0016620
GO:GO:0050661	GO:GO:0051287	GO:GO:0055114	EnsemblPlantsGene:GSMUA_Achr11G19110_001	EnsemblPlants:GSMUA_Achr11P19110_001	EnsemblPlants:GSMUA_Achr11T19110_001
InterPro:GlycerAld/Erythrose_P_DH	InterPro:GlycerAld_3-P_DH_AS	InterPro:GlycerAld_3-P_DH_NAD(P)-bd	InterPro:GlycerAld_3-P_DH_cat	InterPro:Glyceraldehyde-3-P_DH_1	UniProt:M0RTJ1
InterPro:NAD(P)-bd_dom_sf	PFAM:PF00044	PFAM:PF02800	PRINTS:PR00078	ScanProsite:PS00071	PANTHER:PTHR10836
PANTHER:PTHR10836:SF63	SMART:SM00846	SUPFAM:SSF51735	SUPFAM:SSF55347	TIGRFAMs:TIGR01534	TMHMM:TMhelix
UniParc:UPI0002956B2F	SEG:seg	:	:	:	:

Description

Glyceraldehyde-3-phosphate dehydrogenase, cytosolic 3 [Source:GMGC_GENE;Acc:GSMUA_Achr11G19110_001]

Coordinates

chr11:-:20339071..20343472

Molecular Weight (calculated)

46047.0 Da

IEP (calculated)

8.785

GRAVY (calculated)

-0.126

Length

418 amino acids

Sequence
(BLAST)

001: MITRHPARNP SWRLLLRLYK RDGLRPLPFR LHFSSSDASF LCFLGSHLRS PWLERSRSAS TGSEGSGGWS PESHFRVTMW SSLLSTTPSS PLITCVPYEL
101: YSSYLLFPVF FVMIDVLSTF ISSGTYMFKY DTVHGSWKHH EIKVKDSKTL LFGEKEVTVF GIRNPEEIPW GESGAEYVVE STGVFTDKDK AAAHLKGGAK
201: KVIISAPSKD APMFVIGVNE NEYTSDINIV SNASCTTNCL APLAKVIHDR FGIVEGLMTT VHSITATQKT VDGPSSKDWR GGRAASFNII PSSTGAAKAV
301: GKVLPSLNGK LTGMSFRVPT VDVSVVDLTV RLEKAATYDE IKAAIKEESE GKLKGILGYV EEDLVSTDFV GDSRSSIFDA KAGIALNPNF AKLVSWYDNE
401: WGYSSRVIDL IRHIHKTK

Best Arabidopsis Sequence Match ( AT1G13440.1 )
(BLAST)

001: MADKKIRIGI NGFGRIGRLV ARVVLQRDDV ELVAVNDPFI TTEYMTYMFK YDSVHGQWKH HELKVKDDKT LLFGEKPVTV FGIRNPEDIP WGEAGADFVV
101: ESTGVFTDKD KAAAHLKGGA KKVVISAPSK DAPMFVVGVN EHEYKSDLDI VSNASCTTNC LAPLAKVIND RFGIVEGLMT TVHSITATQK TVDGPSMKDW
201: RGGRAASFNI IPSSTGAAKA VGKVLPSLNG KLTGMSFRVP TVDVSVVDLT VRLEKAATYD EIKKAIKEES EGKMKGILGY TEDDVVSTDF VGDNRSSIFD
301: AKAGIALSDK FVKLVSWYDN EWGYSSRVVD LIVHMSKA

Arabidopsis Description

GAPC2Glyceraldehyde-3-phosphate dehydrogenase GAPC2, cytosolic [Source:UniProtKB/Swiss-Prot;Acc:Q9FX54]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.