Factsheet for VIT_14s0171g00440.t01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 1
cytosol 5
mitochondrion 3

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_01s0010g02460.t01	Wine grape	cytosol	87.83	87.06
VIT_17s0000g10430.t01	Wine grape	extracellular	86.35	86.35
KRG94350	Soybean	cytosol, mitochondrion	85.16	85.16
KRH57621	Soybean	endoplasmic reticulum	84.87	84.87
VIT_14s0006g03030.t01	Wine grape	extracellular	18.4	68.89
GSMUA_Achr11P...	Banana	mitochondrion	78.64	63.4
VIT_19s0085g00600.t01	Wine grape	plastid	71.51	56.18
VIT_14s0068g00680.t01	Wine grape	plastid	45.1	37.62
VIT_18s0089g00560.t01	Wine grape	mitochondrion, peroxisome, plastid	20.47	35.94
VIT_18s0122g00960.t01	Wine grape	plastid	47.48	35.32
VIT_18s0089g00590.t01	Wine grape	plastid	28.49	24.43

Protein Annotations

KEGG:00010+1.2.1.12	KEGG:00710+1.2.1.12	EntrezGene:100242264	wikigene:100242264	MapMan:2.1.1.4.1	Gene3D:3.30.360.10
Gene3D:3.40.50.720	ProteinID:CBI40083	ProteinID:CBI40083.3	UniProt:D7UBG8	EMBL:FN596749	GO:GO:0000166
GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0005975	GO:GO:0006006	GO:GO:0008150
GO:GO:0008152	GO:GO:0016491	GO:GO:0016620	GO:GO:0050661	GO:GO:0051287	GO:GO:0055114
InterPro:GlycerAld/Erythrose_P_DH	InterPro:GlycerAld_3-P_DH_AS	InterPro:GlycerAld_3-P_DH_NAD(P)-bd	InterPro:GlycerAld_3-P_DH_cat	InterPro:Glyceraldehyde-3-P_DH_1	EntrezGene:LOC100242264
wikigene:LOC100242264	InterPro:NAD(P)-bd_dom_sf	PFAM:PF00044	PFAM:PF02800	PIRSF:PIRSF000149	PRINTS:PR00078
ScanProsite:PS00071	PANTHER:PTHR10836	PANTHER:PTHR10836:SF63	SMART:SM00846	SUPFAM:SSF51735	SUPFAM:SSF55347
TIGRFAMs:TIGR01534	UniParc:UPI00015C98B0	ArrayExpress:VIT_14s0171g00440	EnsemblPlantsGene:VIT_14s0171g00440	EnsemblPlants:VIT_14s0171g00440.t01	unigene:Vvi.20067
RefSeq:XP_002265988	RefSeq:XP_002265988.1	SEG:seg	:	:	:

Description

Glyceraldehyde-3-phosphate dehydrogenase [Source:UniProtKB/TrEMBL;Acc:D7UBG8]

Coordinates

chr14:-:26240274..26242688

Molecular Weight (calculated)

36559.7 Da

IEP (calculated)

8.199

GRAVY (calculated)

-0.133

Length

337 amino acids

Sequence
(BLAST)

001: MAKIKIGING FGRIGRLVAR VALQRDDVEL VAVNDPFINT DYMTYMFKYD SVHGQWKHHD IKVKDSKTLL FGDKAVTVFG AKNPEEIPWG EAGAEYVVES
101: TGVFTDKDKA ALHLKGGAKK VIISAPSSNA PMFVMGVNEK EYKSNIDIVS NASCTTNCLA PLAKVIHDKF GIVEGLMTTV HSITATQKTV DGPSMKDWRG
201: GRAASFNIIP SSTGAAKAVG KVLPALNGKL TGMAFRVPTA DVSVVDLTVR TEKKASYDDI KAAIKAESEG NLKGILGYTE DEVVSSDFLG DSRSSIFDAK
301: AGIALNENFI KLVSWYDNEW GYSSRVVDLI RHIDSTK

Best Arabidopsis Sequence Match ( AT1G13440.1 )
(BLAST)

001: MADKKIRIGI NGFGRIGRLV ARVVLQRDDV ELVAVNDPFI TTEYMTYMFK YDSVHGQWKH HELKVKDDKT LLFGEKPVTV FGIRNPEDIP WGEAGADFVV
101: ESTGVFTDKD KAAAHLKGGA KKVVISAPSK DAPMFVVGVN EHEYKSDLDI VSNASCTTNC LAPLAKVIND RFGIVEGLMT TVHSITATQK TVDGPSMKDW
201: RGGRAASFNI IPSSTGAAKA VGKVLPSLNG KLTGMSFRVP TVDVSVVDLT VRLEKAATYD EIKKAIKEES EGKMKGILGY TEDDVVSTDF VGDNRSSIFD
301: AKAGIALSDK FVKLVSWYDN EWGYSSRVVD LIVHMSKA

Arabidopsis Description

GAPC2Glyceraldehyde-3-phosphate dehydrogenase GAPC2, cytosolic [Source:UniProtKB/Swiss-Prot;Acc:Q9FX54]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.