Subcellular Localization
min:
: max
Winner_takes_all: extracellular
Predictor Summary:
Predictor Summary:
- extracellular 7
- endoplasmic reticulum 4
- vacuole 4
- plasma membrane 4
- golgi 4
- plastid 3
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KXG19697 | Sorghum | cytosol | 25.56 | 23.71 |
| GSMUA_Achr5P17220_001 | Banana | extracellular | 26.67 | 21.82 |
| Solyc01g098950.1.1 | Tomato | cytosol | 66.67 | 21.58 |
| VIT_01s0010g02460.t01 | Wine grape | cytosol | 73.33 | 19.41 |
| VIT_17s0000g10430.t01 | Wine grape | extracellular | 71.11 | 18.99 |
| PGSC0003DMT400010575 | Potato | cytosol | 70.0 | 18.69 |
| VIT_14s0171g00440.t01 | Wine grape | cytosol | 68.89 | 18.4 |
| KXG28726 | Sorghum | cytosol | 27.78 | 16.45 |
| VIT_19s0085g00600.t01 | Wine grape | plastid | 66.67 | 13.99 |
| Solyc03g111000.2.1 | Tomato | cytosol | 25.56 | 13.22 |
| HORVU6Hr1G089870.1 | Barley | cytosol | 5.56 | 11.9 |
| VIT_14s0068g00680.t01 | Wine grape | plastid | 43.33 | 9.65 |
| VIT_18s0122g00960.t01 | Wine grape | plastid | 42.22 | 8.39 |
| VIT_18s0089g00590.t01 | Wine grape | plastid | 15.56 | 3.56 |
| VIT_18s0089g00560.t01 | Wine grape | mitochondrion, peroxisome, plastid | 6.67 | 3.12 |
| HORVU2Hr1G123240.1 | Barley | cytosol | 1.11 | 2.63 |
| HORVU2Hr1G123170.1 | Barley | cytosol | 1.11 | 2.63 |
Protein Annotations
| Gene3D:3.30.360.10 | MapMan:50.1.2 | ProteinID:CCB57719 | ProteinID:CCB57719.1 | UniProt:F6HSE2 | EMBL:FN596245 |
| GO:GO:0003674 | GO:GO:0003824 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0016620 | GO:GO:0055114 |
| InterPro:GlycerAld/Erythrose_P_DH | InterPro:GlycerAld_3-P_DH_cat | PFAM:PF02800 | PRINTS:PR00078 | PANTHER:PTHR10836 | PANTHER:PTHR10836:SF62 |
| SUPFAM:SSF55347 | SignalP:SignalP-noTM | UniParc:UPI0002108894 | ArrayExpress:VIT_14s0006g03030 | EnsemblPlantsGene:VIT_14s0006g03030 | EnsemblPlants:VIT_14s0006g03030.t01 |
Description
No Description!
Coordinates
chr14:+:21419495..21419856
Molecular Weight (calculated)
9576.2 Da
IEP (calculated)
9.211
GRAVY (calculated)
0.611
Length
90 amino acids
Sequence
(BLAST)
(BLAST)
1: MLLCLLWVCT TNCLAPLAKV INDRFGIVEG LMITVHFIPT TQKTVDGPLS KACKCGKVAS FNIIPCNTGA AKAIGMVLHA LNGKSTRMSL
001: MADKKIRIGI NGFGRIGRLV ARVVLQRDDV ELVAVNDPFI TTEYMTYMFK YDSVHGQWKH NELKIKDEKT LLFGEKPVTV FGIRNPEDIP WAEAGADYVV
101: ESTGVFTDKD KAAAHLKGGA KKVVISAPSK DAPMFVVGVN EHEYKSDLDI VSNASCTTNC LAPLAKVIND RFGIVEGLMT TVHSITATQK TVDGPSMKDW
201: RGGRAASFNI IPSSTGAAKA VGKVLPALNG KLTGMSFRVP TVDVSVVDLT VRLEKAATYD EIKKAIKEES EGKLKGILGY TEDDVVSTDF VGDNRSSIFD
301: AKAGIALSDK FVKLVSWYDN EWGYSSRVVD LIVHMSKA
101: ESTGVFTDKD KAAAHLKGGA KKVVISAPSK DAPMFVVGVN EHEYKSDLDI VSNASCTTNC LAPLAKVIND RFGIVEGLMT TVHSITATQK TVDGPSMKDW
201: RGGRAASFNI IPSSTGAAKA VGKVLPALNG KLTGMSFRVP TVDVSVVDLT VRLEKAATYD EIKKAIKEES EGKLKGILGY TEDDVVSTDF VGDNRSSIFD
301: AKAGIALSDK FVKLVSWYDN EWGYSSRVVD LIVHMSKA
Arabidopsis Description
GAPC1Glyceraldehyde-3-phosphate dehydrogenase GAPC1, cytosolic [Source:UniProtKB/Swiss-Prot;Acc:P25858]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.