Factsheet for Solyc01g098950.1.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 5
plastid 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc05g014480.2.1	Tomato	cytosol	10.43	76.32
HORVU2Hr1G123170.1	Barley	cytosol	9.35	68.42
HORVU2Hr1G123240.1	Barley	cytosol	9.35	68.42
Solyc06g071920.2.1	Tomato	nucleus	80.94	66.77
VIT_14s0006g03030.t01	Wine grape	extracellular	21.58	66.67
Solyc03g111010.2.1	Tomato	plastid	76.98	63.5
HORVU6Hr1G089870.1	Barley	cytosol	9.35	61.9
Solyc05g014470.2.1	Tomato	extracellular, plastid	73.02	60.06
Solyc05g005820.2.1	Tomato	plastid, unclear	71.94	59.35
KRG94350	Soybean	cytosol, mitochondrion	71.94	59.35
KRH57621	Soybean	endoplasmic reticulum	71.22	58.75
Solyc03g111000.2.1	Tomato	cytosol	29.86	47.7
GSMUA_Achr5P17220_001	Banana	extracellular	17.99	45.45
Solyc10g005510.2.1	Tomato	plastid	60.07	39.86
Solyc04g009030.2.1	Tomato	plastid	41.01	28.57
Solyc02g020940.2.1	Tomato	plastid	40.65	27.63
Solyc12g094640.1.1	Tomato	plastid	42.45	26.22
Solyc04g082630.2.1	Tomato	plastid	42.81	25.0

Protein Annotations

Gene3D:3.30.360.10	MapMan:50.1.2	GO:GO:0003674	GO:GO:0003824	GO:GO:0008150	GO:GO:0008152
GO:GO:0016620	GO:GO:0055114	InterPro:GlycerAld/Erythrose_P_DH	InterPro:GlycerAld_3-P_DH_AS	InterPro:GlycerAld_3-P_DH_NAD(P)-bd	InterPro:GlycerAld_3-P_DH_cat
UniProt:K4B0T2	InterPro:NAD(P)-bd_dom_sf	PFAM:PF00044	PFAM:PF02800	PRINTS:PR00078	ScanProsite:PS00071
PANTHER:PTHR10836	PANTHER:PTHR10836:SF60	SMART:SM00846	SUPFAM:SSF51735	SUPFAM:SSF55347	EnsemblPlantsGene:Solyc01g098950.1
EnsemblPlants:Solyc01g098950.1.1	UniParc:UPI000276899F	SEG:seg	:	:	:

Description

No Description!

Coordinates

chr1:+:89312621..89314307

Molecular Weight (calculated)

30715.9 Da

IEP (calculated)

7.190

GRAVY (calculated)

-0.111

Length

278 amino acids

Sequence
(BLAST)

001: MLCEIHTVIF SSNNISRSVV FWGFKSMGIV YDDCCRHTWS CTYMFKYDSV HGQWKNNELK VKDEKTLLFD EKPVTVFGIR DPEEIPWAEA GAEYIVESTG
101: VFIDKDKVAA HLKGGAKKVV ISAPSKDAPM FVVGVNEKEY KPDLNIDSNA SCTTNCLAPL AKVIHDRFGI VEGLMTTVHS ITATQKTVDG PSAKDWRGGR
201: DASFNIIPSS TGAAKAVGKV LPSLNGKLTG MSFRVPTVDV SVVDRTVRLE KEATYDEIKA AIMLNSFTFE HLRCHLLS

Best Arabidopsis Sequence Match ( AT1G13440.1 )
(BLAST)

001: MADKKIRIGI NGFGRIGRLV ARVVLQRDDV ELVAVNDPFI TTEYMTYMFK YDSVHGQWKH HELKVKDDKT LLFGEKPVTV FGIRNPEDIP WGEAGADFVV
101: ESTGVFTDKD KAAAHLKGGA KKVVISAPSK DAPMFVVGVN EHEYKSDLDI VSNASCTTNC LAPLAKVIND RFGIVEGLMT TVHSITATQK TVDGPSMKDW
201: RGGRAASFNI IPSSTGAAKA VGKVLPSLNG KLTGMSFRVP TVDVSVVDLT VRLEKAATYD EIKKAIKEES EGKMKGILGY TEDDVVSTDF VGDNRSSIFD
301: AKAGIALSDK FVKLVSWYDN EWGYSSRVVD LIVHMSKA

Arabidopsis Description

GAPC2Glyceraldehyde-3-phosphate dehydrogenase GAPC2, cytosolic [Source:UniProtKB/Swiss-Prot;Acc:Q9FX54]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.