Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- plastid 2
- cytosol 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| HORVU2Hr1G123170.1 | Barley | cytosol | 10.92 | 50.0 |
| HORVU2Hr1G123240.1 | Barley | cytosol | 10.92 | 50.0 |
| HORVU6Hr1G089870.1 | Barley | cytosol | 10.92 | 45.24 |
| Solyc05g014480.2.1 | Tomato | cytosol | 7.47 | 34.21 |
| Solyc01g098950.1.1 | Tomato | cytosol | 47.7 | 29.86 |
| Solyc03g111010.2.1 | Tomato | plastid | 54.6 | 28.19 |
| Solyc06g071920.2.1 | Tomato | nucleus | 54.02 | 27.89 |
| Solyc05g014470.2.1 | Tomato | extracellular, plastid | 54.02 | 27.81 |
| Solyc05g005820.2.1 | Tomato | plastid, unclear | 51.15 | 26.41 |
| VIT_14s0006g03030.t01 | Wine grape | extracellular | 13.22 | 25.56 |
| KRH57621 | Soybean | endoplasmic reticulum | 47.7 | 24.63 |
| KRG94350 | Soybean | cytosol, mitochondrion | 47.7 | 24.63 |
| GSMUA_Achr5P17220_001 | Banana | extracellular | 10.92 | 17.27 |
| Solyc10g005510.2.1 | Tomato | plastid | 41.38 | 17.18 |
| Solyc04g009030.2.1 | Tomato | plastid | 33.33 | 14.54 |
| Solyc02g020940.2.1 | Tomato | plastid | 32.76 | 13.94 |
| Solyc12g094640.1.1 | Tomato | plastid | 34.48 | 13.33 |
| Solyc04g082630.2.1 | Tomato | plastid | 35.63 | 13.03 |
Protein Annotations
| EnsemblPlants:Solyc03g111000.2.1 | EnsemblPlantsGene:Solyc03g111000.2 | Gene3D:3.30.360.10 | Gene3D:3.40.50.720 | GO:GO:0003674 | GO:GO:0003824 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0016620 | GO:GO:0055114 | InterPro:GlycerAld/Erythrose_P_DH | InterPro:GlycerAld_3-P_DH_NAD(P)-bd |
| InterPro:NAD(P)-bd_dom_sf | PANTHER:PTHR10836 | PANTHER:PTHR10836:SF60 | PFAM:PF00044 | SEG:seg | SMART:SM00846 |
| SUPFAM:SSF51735 | SUPFAM:SSF55347 | UniParc:UPI0002768D01 | UniProt:K4BJW3 | MapMan:35.1 | : |
Description
No Description!
Coordinates
chr3:+:61701908..61705478
Molecular Weight (calculated)
19416.9 Da
IEP (calculated)
5.077
GRAVY (calculated)
-0.424
Length
174 amino acids
Sequence
(BLAST)
(BLAST)
001: MDYMTNLLEN DSEHGRWKLP DLKVKDEKTI FYRDKAVTVT GIRSSEGIPW AESKSDYVVD TIGVSSDKDK DAAHSKDGDN KVVISALGKD VHLFVEGIRT
101: TGNSITAAQR TVNGPSVDDW IVRRDASFNI IPTNIGTAKA VWKETEAELK EILGFRKDDL FMQSMVLLWT GNLP
101: TGNSITAAQR TVNGPSVDDW IVRRDASFNI IPTNIGTAKA VWKETEAELK EILGFRKDDL FMQSMVLLWT GNLP
001: MADKKIRIGI NGFGRIGRLV ARVVLQRDDV ELVAVNDPFI TTEYMTYMFK YDSVHGQWKH HELKVKDDKT LLFGEKPVTV FGIRNPEDIP WGEAGADFVV
101: ESTGVFTDKD KAAAHLKGGA KKVVISAPSK DAPMFVVGVN EHEFGIVEGL MTTVHSITAT QKTVDGPSMK DWRGGRAASF NIIPSSTGAA KAVGKVLPSL
201: NGKLTGMSFR VPTVDVSVVD LTVRLEKAAT YDEIKKAIKE ESEGKMKGIL GYTEDDVVST DFVGDNRSSI FDAKAGIALS DKFVKLVSWY DNEWGYSSRV
301: VDLIVHMSKA
101: ESTGVFTDKD KAAAHLKGGA KKVVISAPSK DAPMFVVGVN EHEFGIVEGL MTTVHSITAT QKTVDGPSMK DWRGGRAASF NIIPSSTGAA KAVGKVLPSL
201: NGKLTGMSFR VPTVDVSVVD LTVRLEKAAT YDEIKKAIKE ESEGKMKGIL GYTEDDVVST DFVGDNRSSI FDAKAGIALS DKFVKLVSWY DNEWGYSSRV
301: VDLIVHMSKA
Arabidopsis Description
GAPC2Glyceraldehyde-3-phosphate dehydrogenase GAPC2, cytosolic [Source:UniProtKB/Swiss-Prot;Acc:Q9FX54]
SUBAcon: [mitochondrion,peroxisome,cytosol]
SUBAcon: [mitochondrion,peroxisome,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.