Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- plastid 1
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| AT1G13440.1 | Thale cress | cytosol | 97.93 | 97.93 |
| Bra019722.1-P | Field mustard | cytosol | 84.02 | 96.6 |
| CDY49358 | Canola | cytosol, mitochondrion | 95.86 | 96.43 |
| Bra016729.1-P | Field mustard | cytosol | 96.45 | 96.17 |
| Bra026904.1-P | Field mustard | cytosol | 96.15 | 96.15 |
| Bra040213.1-P | Field mustard | cytosol | 96.15 | 96.15 |
| Bra040146.1-P | Field mustard | cytosol | 95.27 | 95.27 |
| CDX92059 | Canola | cytosol, endoplasmic reticulum, peroxisome | 96.15 | 93.39 |
| CDY42906 | Canola | cytosol | 96.45 | 92.35 |
| CDX74199 | Canola | endoplasmic reticulum | 95.56 | 91.76 |
| KRG97466 | Soybean | endoplasmic reticulum, nucleus | 91.42 | 90.88 |
| PGSC0003DMT400044944 | Potato | extracellular | 90.53 | 90.53 |
| Solyc05g014470.2.1 | Tomato | extracellular, plastid | 90.24 | 90.24 |
| KRH31426 | Soybean | endoplasmic reticulum | 90.53 | 90.0 |
| VIT_17s0000g10430.t01 | Wine grape | extracellular | 89.35 | 89.61 |
| CDX98100 | Canola | cytosol, mitochondrion, peroxisome | 84.02 | 89.31 |
| Os04t0486600-01 | Rice | plastid | 88.76 | 89.02 |
| KRH54234 | Soybean | endoplasmic reticulum, nucleus | 88.17 | 88.17 |
| KRH63724 | Soybean | nucleus | 88.17 | 88.17 |
| KRH63725 | Soybean | endoplasmic reticulum, nucleus | 88.17 | 88.17 |
| CDY50169 | Canola | cytosol | 96.75 | 87.9 |
| Os02t0601300-01 | Rice | plasma membrane | 87.57 | 87.83 |
| CDY21098 | Canola | cytosol | 96.75 | 87.67 |
| KRH54227 | Soybean | endoplasmic reticulum, nucleus | 87.57 | 87.57 |
| TraesCS7B01G213300.1 | Wheat | golgi | 87.28 | 87.54 |
| TraesCS7D01G309500.1 | Wheat | cytosol | 87.28 | 87.54 |
| TraesCS6D01G196300.2 | Wheat | golgi, nucleus | 86.39 | 86.65 |
| EES05377 | Sorghum | cytosol | 86.09 | 86.35 |
| TraesCS6A01G213700.1 | Wheat | unclear | 86.09 | 86.35 |
| Os08t0126300-01 | Rice | cytosol | 85.8 | 86.05 |
| KXG24320 | Sorghum | cytosol | 85.8 | 86.05 |
| Zm00001d051001_P002 | Maize | cytosol | 85.8 | 86.05 |
| KXG20851 | Sorghum | cytosol | 85.21 | 85.46 |
| Zm00001d049641_P001 | Maize | plasma membrane, plastid | 85.21 | 85.46 |
| KXG21112 | Sorghum | cytosol | 84.91 | 85.16 |
| CDY26651 | Canola | mitochondrion, peroxisome | 83.73 | 84.98 |
| OQU77090 | Sorghum | cytosol | 55.03 | 83.78 |
| CDY21135 | Canola | cytosol, mitochondrion, peroxisome, plastid | 84.02 | 83.28 |
| CDY30032 | Canola | cytosol | 96.75 | 83.21 |
| Zm00001d035156_P003 | Maize | cytosol | 85.5 | 82.81 |
| TraesCS7A01G313100.1 | Wheat | cytosol | 84.32 | 82.61 |
| TraesCS6B01G243700.1 | Wheat | endoplasmic reticulum | 86.39 | 81.56 |
| TraesCS7B01G234400.1 | Wheat | cytosol | 81.36 | 80.17 |
| HORVU6Hr1G054520.3 | Barley | cytosol, mitochondrion | 85.8 | 79.67 |
| PGSC0003DMT400044945 | Potato | cytosol | 39.94 | 76.27 |
| CDY16090 | Canola | cytoskeleton, cytosol, peroxisome | 96.45 | 75.81 |
| CDY29987 | Canola | cytosol, peroxisome, plastid | 83.73 | 75.27 |
| HORVU7Hr1G074690.3 | Barley | extracellular, plasma membrane | 87.28 | 75.06 |
| GSMUA_Achr2P02600_001 | Banana | cytosol | 10.95 | 63.79 |
| GSMUA_Achr2P02610_001 | Banana | cytosol | 13.91 | 61.04 |
| AT1G79530.1 | Thale cress | plastid | 72.78 | 58.29 |
| AT1G16300.1 | Thale cress | plastid | 71.3 | 57.38 |
| Zm00001d017121_P001 | Maize | plastid | 85.8 | 56.86 |
| KRH37937 | Soybean | plastid | 12.72 | 48.86 |
| AT3G26650.1 | Thale cress | plastid | 46.75 | 39.9 |
| AT1G42970.1 | Thale cress | plastid | 48.52 | 36.69 |
| AT1G12900.5 | Thale cress | endoplasmic reticulum | 47.63 | 36.51 |
Protein Annotations
| KEGG:00010+1.2.1.12 | KEGG:00710+1.2.1.12 | MapMan:2.1.1.4.1 | Gene3D:3.30.360.10 | Gene3D:3.40.50.720 | PDB:4Z0H |
| EntrezGene:819567 | ProteinID:AAA32796.1 | ProteinID:AAF26801.1 | ProteinID:AEE74039.1 | EMBL:AK226804 | ArrayExpress:AT3G04120 |
| EnsemblPlantsGene:AT3G04120 | RefSeq:AT3G04120 | TAIR:AT3G04120 | RefSeq:AT3G04120-TAIR-G | EnsemblPlants:AT3G04120.1 | TAIR:AT3G04120.1 |
| EMBL:AY052267 | EMBL:AY060521 | EMBL:AY087651 | EMBL:AY140084 | EMBL:F20074 | Symbol:GAPC |
| GO:GO:0000003 | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003824 |
| GO:GO:0004365 | GO:GO:0005488 | GO:GO:0005507 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005576 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0005737 | GO:GO:0005739 | GO:GO:0005740 |
| GO:GO:0005773 | GO:GO:0005774 | GO:GO:0005829 | GO:GO:0005886 | GO:GO:0005975 | GO:GO:0006006 |
| GO:GO:0006091 | GO:GO:0006094 | GO:GO:0006096 | GO:GO:0006139 | GO:GO:0006950 | GO:GO:0006979 |
| GO:GO:0007275 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0008886 | GO:GO:0009056 | GO:GO:0009058 |
| GO:GO:0009408 | GO:GO:0009507 | GO:GO:0009536 | GO:GO:0009628 | GO:GO:0009651 | GO:GO:0009744 |
| GO:GO:0009791 | GO:GO:0009987 | GO:GO:0010154 | GO:GO:0016020 | GO:GO:0016491 | GO:GO:0016620 |
| GO:GO:0042542 | GO:GO:0046686 | GO:GO:0048046 | GO:GO:0048316 | GO:GO:0050661 | GO:GO:0051287 |
| GO:GO:0051775 | GO:GO:0055114 | InterPro:GlycerAld/Erythrose_P_DH | InterPro:GlycerAld_3-P_DH_AS | InterPro:GlycerAld_3-P_DH_NAD(P)-bd | InterPro:GlycerAld_3-P_DH_cat |
| InterPro:Glyceraldehyde-3-P_DH_1 | EMBL:M64116 | InterPro:NAD(P)-bd_dom_sf | RefSeq:NP_187062.1 | UniProt:P25858 | PFAM:PF00044 |
| PFAM:PF02800 | PIRSF:PIRSF000149 | PO:PO:0000005 | PO:PO:0000013 | PO:PO:0000014 | PO:PO:0000037 |
| PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001016 | PO:PO:0001017 | PO:PO:0001054 | PO:PO:0001078 |
| PO:PO:0001081 | PO:PO:0001185 | PO:PO:0004507 | PO:PO:0005020 | PO:PO:0006339 | PO:PO:0006503 |
| PO:PO:0007064 | PO:PO:0007095 | PO:PO:0007098 | PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 |
| PO:PO:0007131 | PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009001 | PO:PO:0009005 |
| PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 |
| PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 | PO:PO:0020030 |
| PO:PO:0020038 | PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 | PO:PO:0025025 | PO:PO:0025195 |
| PO:PO:0025281 | PO:PO:0025297 | PO:PO:0025471 | PRINTS:PR00078 | ScanProsite:PS00071 | PANTHER:PTHR10836 |
| PANTHER:PTHR10836:SF63 | SMART:SM00846 | SUPFAM:SSF51735 | SUPFAM:SSF55347 | TIGRFAMs:TIGR01534 | UniParc:UPI00000017F3 |
| SEG:seg | : | : | : | : | : |
Description
GAPC1Glyceraldehyde-3-phosphate dehydrogenase GAPC1, cytosolic [Source:UniProtKB/Swiss-Prot;Acc:P25858]
Coordinates
chr3:+:1080942..1083690
Molecular Weight (calculated)
36916.3 Da
IEP (calculated)
7.147
GRAVY (calculated)
-0.129
Length
338 amino acids
Sequence
(BLAST)
(BLAST)
001: MADKKIRIGI NGFGRIGRLV ARVVLQRDDV ELVAVNDPFI TTEYMTYMFK YDSVHGQWKH NELKIKDEKT LLFGEKPVTV FGIRNPEDIP WAEAGADYVV
101: ESTGVFTDKD KAAAHLKGGA KKVVISAPSK DAPMFVVGVN EHEYKSDLDI VSNASCTTNC LAPLAKVIND RFGIVEGLMT TVHSITATQK TVDGPSMKDW
201: RGGRAASFNI IPSSTGAAKA VGKVLPALNG KLTGMSFRVP TVDVSVVDLT VRLEKAATYD EIKKAIKEES EGKLKGILGY TEDDVVSTDF VGDNRSSIFD
301: AKAGIALSDK FVKLVSWYDN EWGYSSRVVD LIVHMSKA
101: ESTGVFTDKD KAAAHLKGGA KKVVISAPSK DAPMFVVGVN EHEYKSDLDI VSNASCTTNC LAPLAKVIND RFGIVEGLMT TVHSITATQK TVDGPSMKDW
201: RGGRAASFNI IPSSTGAAKA VGKVLPALNG KLTGMSFRVP TVDVSVVDLT VRLEKAATYD EIKKAIKEES EGKLKGILGY TEDDVVSTDF VGDNRSSIFD
301: AKAGIALSDK FVKLVSWYDN EWGYSSRVVD LIVHMSKA
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.