Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- plastid 1
- cytosol 2
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| TraesCS3A01G391100.1 | cytosol, cytosol, mitochondrion |
| TraesCS3A01G391500.1 | cytosol, cytosol, mitochondrion |
| TraesCS3B01G422900.1 | cytosol, cytosol, mitochondrion |
| TraesCS3B01G423200.1 | cytosol, cytosol, mitochondrion |
| TraesCS3D01G383700.1 | cytosol, cytosol, mitochondrion |
| TraesCS3D01G384000.1 | cytosol, cytosol, mitochondrion |
| TraesCS3D01G384100.2 | cytosol, cytosol, mitochondrion |
| TraesCS5A01G009400.1 | cytosol, cytosol, mitochondrion |
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS6B01G243700.1 | Wheat | endoplasmic reticulum | 90.67 | 86.87 |
| Os02t0601300-01 | Rice | plasma membrane | 84.84 | 86.35 |
| Zm00001d051001_P002 | Maize | cytosol | 83.97 | 85.46 |
| EES05377 | Sorghum | cytosol | 83.97 | 85.46 |
| HORVU6Hr1G054520.3 | Barley | cytosol, mitochondrion | 89.8 | 84.62 |
| KXG21112 | Sorghum | cytosol | 83.09 | 84.57 |
| VIT_01s0010g02460.t01 | Wine grape | cytosol | 83.09 | 83.82 |
| KRH31426 | Soybean | endoplasmic reticulum | 81.63 | 82.35 |
| KRG97466 | Soybean | endoplasmic reticulum, nucleus | 81.63 | 82.35 |
| Solyc03g111010.2.1 | Tomato | plastid | 80.76 | 82.2 |
| PGSC0003DMT400039449 | Potato | extracellular | 80.76 | 82.2 |
| GSMUA_Achr11P... | Banana | cytosol | 82.51 | 82.03 |
| AT3G04120.1 | Thale cress | cytosol | 80.17 | 81.36 |
| VIT_17s0000g10430.t01 | Wine grape | extracellular | 79.88 | 81.31 |
| Solyc06g071920.2.1 | Tomato | nucleus | 79.88 | 81.31 |
| CDY49358 | Canola | cytosol, mitochondrion | 79.59 | 81.25 |
| Bra016729.1-P | Field mustard | cytosol | 80.17 | 81.12 |
| Bra040213.1-P | Field mustard | cytosol | 79.88 | 81.07 |
| AT1G13440.1 | Thale cress | cytosol | 79.88 | 81.07 |
| Bra026904.1-P | Field mustard | cytosol | 79.59 | 80.77 |
| Bra040146.1-P | Field mustard | cytosol | 79.59 | 80.77 |
| KRH54234 | Soybean | endoplasmic reticulum, nucleus | 79.59 | 80.77 |
| PGSC0003DMT400069357 | Potato | cytosol | 79.3 | 80.71 |
| PGSC0003DMT400044944 | Potato | extracellular | 79.3 | 80.47 |
| KRH63725 | Soybean | endoplasmic reticulum, nucleus | 79.3 | 80.47 |
| KRH63724 | Soybean | nucleus | 79.3 | 80.47 |
| TraesCS7B01G213300.1 | Wheat | golgi | 79.01 | 80.42 |
| KRH54227 | Soybean | endoplasmic reticulum, nucleus | 79.01 | 80.18 |
| Solyc05g014470.2.1 | Tomato | extracellular, plastid | 79.01 | 80.18 |
| Bra019722.1-P | Field mustard | cytosol | 68.51 | 79.93 |
| GSMUA_AchrUn_... | Banana | endoplasmic reticulum | 83.09 | 79.39 |
| CDX92059 | Canola | cytosol, endoplasmic reticulum, peroxisome | 79.88 | 78.74 |
| CDY42906 | Canola | cytosol | 80.17 | 77.9 |
| CDX74199 | Canola | endoplasmic reticulum | 79.3 | 77.27 |
| CDY50169 | Canola | cytosol | 80.17 | 73.92 |
| CDX98100 | Canola | cytosol, mitochondrion, peroxisome | 68.51 | 73.9 |
| CDY21098 | Canola | cytosol | 80.17 | 73.73 |
| GSMUA_Achr11P... | Banana | plasma membrane | 83.67 | 71.39 |
| CDY26651 | Canola | mitochondrion, peroxisome | 68.22 | 70.27 |
| CDY30032 | Canola | cytosol | 80.17 | 69.97 |
| CDY21135 | Canola | cytosol, mitochondrion, peroxisome, plastid | 68.51 | 68.92 |
| PGSC0003DMT400044945 | Potato | cytosol | 34.69 | 67.23 |
| CDY16090 | Canola | cytoskeleton, cytosol, peroxisome | 79.3 | 63.26 |
| CDY29987 | Canola | cytosol, peroxisome, plastid | 68.22 | 62.23 |
| Zm00001d017121_P001 | Maize | plastid | 83.97 | 56.47 |
| TraesCS7B01G380500.1 | Wheat | plastid | 65.31 | 54.77 |
| TraesCS6B01G185400.1 | Wheat | plastid | 64.14 | 52.88 |
| KRH37937 | Soybean | plastid | 11.08 | 43.18 |
| TraesCS2B01G342200.1 | Wheat | plastid | 42.27 | 36.16 |
| TraesCS4B01G323000.1 | Wheat | plastid | 43.73 | 33.78 |
| TraesCS3B01G076300.1 | Wheat | plastid | 34.11 | 19.8 |
Protein Annotations
| KEGG:00010+1.2.1.12 | KEGG:00710+1.2.1.12 | MapMan:2.1.1.4.1 | Gene3D:3.30.360.10 | Gene3D:3.40.50.720 | GO:GO:0000166 |
| GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005488 | GO:GO:0005975 | GO:GO:0006006 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0016620 | GO:GO:0050661 | GO:GO:0051287 | GO:GO:0055114 | InterPro:GlycerAld/Erythrose_P_DH |
| InterPro:GlycerAld_3-P_DH_NAD(P)-bd | InterPro:GlycerAld_3-P_DH_cat | InterPro:Glyceraldehyde-3-P_DH_1 | InterPro:NAD(P)-bd_dom_sf | PFAM:PF00044 | PFAM:PF02800 |
| PIRSF:PIRSF000149 | PRINTS:PR00078 | PANTHER:PTHR10836 | PANTHER:PTHR10836:SF63 | SMART:SM00846 | SUPFAM:SSF51735 |
| SUPFAM:SSF55347 | TIGRFAMs:TIGR01534 | EnsemblPlantsGene:TraesCS7B01G234400 | EnsemblPlants:TraesCS7B01G234400.1 | SEG:seg | : |
Description
No Description!
Coordinates
chr7B:+:438788029..438790537
Molecular Weight (calculated)
37214.8 Da
IEP (calculated)
8.415
GRAVY (calculated)
-0.024
Length
343 amino acids
Sequence
(BLAST)
(BLAST)
001: MAPIKIGING FGRIGRLVAK VALQSPDVEL VAVNDPFITT DYMTYMFKYD TVHGPWKHHE VKVKDSKTLL FGEKEVAVFG CRNPEEIPWA AASAEYVVES
101: TGVFIDKDKA AAHIKGGAKK VIISAPSKDA PMFVCGVNEK EYKSDIDIVS NASYTTNCLA PLAKVINDRF DIVEGLMTTV HAITATQKTV DGPSSKDWRG
201: GRAASFKIIP SSTGAAKAVG KVLPELNGKL TRMAFRVPTV DVSVVDLTVR LAKLATYDQI KAAIKEESEG NLKGILGYVD EDLVSTDFQG DNRSSIFDAK
301: AGIALNNNFV KLVSWYDNKW GYRSVAPSMA LAVIGPLTNL HLL
101: TGVFIDKDKA AAHIKGGAKK VIISAPSKDA PMFVCGVNEK EYKSDIDIVS NASYTTNCLA PLAKVINDRF DIVEGLMTTV HAITATQKTV DGPSSKDWRG
201: GRAASFKIIP SSTGAAKAVG KVLPELNGKL TRMAFRVPTV DVSVVDLTVR LAKLATYDQI KAAIKEESEG NLKGILGYVD EDLVSTDFQG DNRSSIFDAK
301: AGIALNNNFV KLVSWYDNKW GYRSVAPSMA LAVIGPLTNL HLL
001: MADKKIRIGI NGFGRIGRLV ARVVLQRDDV ELVAVNDPFI TTEYMTYMFK YDSVHGQWKH HELKVKDDKT LLFGEKPVTV FGIRNPEDIP WGEAGADFVV
101: ESTGVFTDKD KAAAHLKGGA KKVVISAPSK DAPMFVVGVN EHEYKSDLDI VSNASCTTNC LAPLAKVIND RFGIVEGLMT TVHSITATQK TVDGPSMKDW
201: RGGRAASFNI IPSSTGAAKA VGKVLPSLNG KLTGMSFRVP TVDVSVVDLT VRLEKAATYD EIKKAIKEES EGKMKGILGY TEDDVVSTDF VGDNRSSIFD
301: AKAGIALSDK FVKLVSWYDN EWGYSSRVVD LIVHMSKA
101: ESTGVFTDKD KAAAHLKGGA KKVVISAPSK DAPMFVVGVN EHEYKSDLDI VSNASCTTNC LAPLAKVIND RFGIVEGLMT TVHSITATQK TVDGPSMKDW
201: RGGRAASFNI IPSSTGAAKA VGKVLPSLNG KLTGMSFRVP TVDVSVVDLT VRLEKAATYD EIKKAIKEES EGKMKGILGY TEDDVVSTDF VGDNRSSIFD
301: AKAGIALSDK FVKLVSWYDN EWGYSSRVVD LIVHMSKA
Arabidopsis Description
GAPC2Glyceraldehyde-3-phosphate dehydrogenase GAPC2, cytosolic [Source:UniProtKB/Swiss-Prot;Acc:Q9FX54]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.