Factsheet for Zm00001d051001_P002

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
mitochondrion 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion
MultiLoc:	cytosol
Predotar:	mitochondrion
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
Zm00001d012103_P001	cytosol, cytosol, mitochondrion
Zm00001d042453_P001	cytosol, cytosol, mitochondrion

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G13440.1	Zm00001d012103_P001	AT2G36460.1	23316205
AT1G13440.1	Zm00001d042453_P001	AT2G36460.1	23316205
AT1G13440.1	Zm00001d012103_P001	AT2G36460.1	23316205
AT1G13440.1	Zm00001d042453_P001	AT2G36460.1	23316205
AT3G04120.1	Zm00001d012103_P001	AT2G36460.1	23316205
AT3G04120.1	Zm00001d042453_P001	AT2G36460.1	23316205
AT3G04120.1	Zm00001d012103_P001	AT2G36460.1	23316205
AT3G04120.1	Zm00001d042453_P001	AT2G36460.1	23316205

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EES05377	Sorghum	cytosol	97.63	97.63
TraesCS6D01G196300.2	Wheat	golgi, nucleus	91.99	91.99
Os02t0601300-01	Rice	plasma membrane	91.69	91.69
TraesCS6A01G213700.1	Wheat	unclear	91.39	91.39
VIT_01s0010g02460.t01	Wine grape	cytosol	89.02	88.24
PGSC0003DMT400039449	Potato	extracellular	87.54	87.54
CDY49358	Canola	cytosol, mitochondrion	87.24	87.5
Bra040213.1-P	Field mustard	cytosol	87.54	87.28
Solyc06g071920.2.1	Tomato	nucleus	87.24	87.24
Solyc03g111010.2.1	Tomato	plastid	87.24	87.24
GSMUA_Achr11P...	Banana	cytosol	89.02	86.96
Zm00001d049641_P001	Maize	plasma membrane, plastid	86.94	86.94
KRH31426	Soybean	endoplasmic reticulum	87.54	86.76
KRG97466	Soybean	endoplasmic reticulum, nucleus	87.54	86.76
Bra016729.1-P	Field mustard	cytosol	87.24	86.73
Bra040146.1-P	Field mustard	cytosol	86.94	86.69
PGSC0003DMT400069357	Potato	cytosol	86.65	86.65
TraesCS6B01G243700.1	Wheat	endoplasmic reticulum	91.99	86.59
AT1G13440.1	Thale cress	cytosol	86.35	86.09
Bra026904.1-P	Field mustard	cytosol	86.35	86.09
VIT_17s0000g10430.t01	Wine grape	extracellular	86.05	86.05
AT3G04120.1	Thale cress	cytosol	86.05	85.8
PGSC0003DMT400044944	Potato	extracellular	85.76	85.5
Bra019722.1-P	Field mustard	cytosol	74.48	85.37
Solyc05g014470.2.1	Tomato	extracellular, plastid	85.46	85.21
HORVU6Hr1G054520.3	Barley	cytosol, mitochondrion	91.69	84.89
Zm00001d035156_P003	Maize	cytosol	87.54	84.53
GSMUA_AchrUn_...	Banana	endoplasmic reticulum	89.91	84.4
CDX92059	Canola	cytosol, endoplasmic reticulum, peroxisome	86.94	84.2
KRH63724	Soybean	nucleus	84.27	84.02
TraesCS7B01G234400.1	Wheat	cytosol	85.46	83.97
KRH63725	Soybean	endoplasmic reticulum, nucleus	83.98	83.73
KRH54227	Soybean	endoplasmic reticulum, nucleus	83.98	83.73
KRH54234	Soybean	endoplasmic reticulum, nucleus	83.98	83.73
CDY42906	Canola	cytosol	87.24	83.29
CDX74199	Canola	endoplasmic reticulum	86.94	83.24
CDY50169	Canola	cytosol	87.24	79.03
CDX98100	Canola	cytosol, mitochondrion, peroxisome	74.48	78.93
CDY21098	Canola	cytosol	87.24	78.82
CDY30032	Canola	cytosol	87.24	74.81
CDY26651	Canola	mitochondrion, peroxisome	73.89	74.77
GSMUA_Achr11P...	Banana	plasma membrane	89.02	74.63
CDY21135	Canola	cytosol, mitochondrion, peroxisome, plastid	75.07	74.19
PGSC0003DMT400044945	Potato	cytosol	38.87	74.01
CDY16090	Canola	cytoskeleton, cytosol, peroxisome	86.65	67.91
CDY29987	Canola	cytosol, peroxisome, plastid	74.78	67.02
Zm00001d017121_P001	Maize	plastid	99.7	65.88
Zm00001d015383_P001	Maize	plastid	73.0	58.71
Zm00001d053798_P004	Maize	plastid	70.62	57.35
KRH37937	Soybean	plastid	12.46	47.73
Zm00001d003429_P001	Maize	plastid	46.88	39.21
Zm00001d025607_P001	Maize	cytosol, plastid	42.73	38.71
Zm00001d025593_P001	Maize	plastid	43.32	36.23
Zm00001d025599_P001	Maize	plastid	43.03	35.98
Zm00001d027488_P001	Maize	extracellular, plastid	47.48	35.63
Zm00001d025601_P001	Maize	plastid	17.21	33.92
Zm00001d019945_P001	Maize	plastid	10.98	33.33
Zm00001d021798_P001	Maize	cytosol	24.04	31.15
Zm00001d015885_P001	Maize	mitochondrion	13.95	30.92
Zm00001d016297_P001	Maize	cytosol	10.98	27.01

Protein Annotations

KEGG:00010+1.2.1.12	KEGG:00710+1.2.1.12	MapMan:2.1.1.4.1	Gene3D:3.30.360.10	Gene3D:3.40.50.720	EntrezGene:542333
UniProt:A0A1Q0YML2	ProteinID:AQK53418.1	ProteinID:AQK53419.1	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824
GO:GO:0004365	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0005975	GO:GO:0006006	GO:GO:0006091	GO:GO:0006096	GO:GO:0006139	GO:GO:0006950
GO:GO:0008150	GO:GO:0008152	GO:GO:0009056	GO:GO:0009058	GO:GO:0009408	GO:GO:0009628
GO:GO:0009987	GO:GO:0016491	GO:GO:0016620	GO:GO:0032991	GO:GO:0034059	GO:GO:0042301
GO:GO:0043234	GO:GO:0050661	GO:GO:0051287	GO:GO:0055114	GO:GO:0070403	InterPro:GlycerAld/Erythrose_P_DH
InterPro:GlycerAld_3-P_DH_AS	InterPro:GlycerAld_3-P_DH_NAD(P)-bd	InterPro:GlycerAld_3-P_DH_cat	InterPro:Glyceraldehyde-3-P_DH_1	EMBL:L13431	InterPro:NAD(P)-bd_dom_sf
PFAM:PF00044	PFAM:PF02800	PIRSF:PIRSF000149	PRINTS:PR00078	ScanProsite:PS00071	PANTHER:PTHR10836
PANTHER:PTHR10836:SF63	UniProt:Q43247	SMART:SM00846	SUPFAM:SSF51735	SUPFAM:SSF55347	TIGRFAMs:TIGR01534
EMBL:U45856	UniParc:UPI000012AE80	EnsemblPlantsGene:Zm00001d051001	EnsemblPlants:Zm00001d051001_P002	EnsemblPlants:Zm00001d051001_T002	SEG:seg

Description

glyceraldehyde-3-phosphate dehydrogenase3Glyceraldehyde-3-phosphate dehydrogenase 3%2C cytosolic

Coordinates

chr4:+:136187079..136190530

Molecular Weight (calculated)

36450.6 Da

IEP (calculated)

7.589

GRAVY (calculated)

-0.080

Length

337 amino acids

Sequence
(BLAST)

001: MAKIKIGING FGRIGRLVAR VALQSDDVEL VAVNDPFIST DYMTYMFKYD TVHGQWKHHE VKVKDSKTLL FGEKEVAVFG CRNPEEIPWG SVGAEYVVES
101: TGVFTDQEKA AAHLKGGAKK VVISAPSKDA PMFVVGVNEK EYKSDINIVS NASCTTNCLA PLAKVINDKF GIVEGLMTTV HAITATQKTV DGPSSKDWRG
201: GRAASFNIIP SSTGAAKAVG KVLPVLNGKL TGMSFRVPTV DVSVVDLTVR LEKSATYDEI KAAVKAEAEG SLKGILGYVE EDLVSTDFQG DSRSSIFDAK
301: AGIALNGNFV KLVSWYDNEW GYSTRVVDLI RHMNSTK

Best Arabidopsis Sequence Match ( AT1G13440.1 )
(BLAST)

001: MADKKIRIGI NGFGRIGRLV ARVVLQRDDV ELVAVNDPFI TTEYMTYMFK YDSVHGQWKH HELKVKDDKT LLFGEKPVTV FGIRNPEDIP WGEAGADFVV
101: ESTGVFTDKD KAAAHLKGGA KKVVISAPSK DAPMFVVGVN EHEYKSDLDI VSNASCTTNC LAPLAKVIND RFGIVEGLMT TVHSITATQK TVDGPSMKDW
201: RGGRAASFNI IPSSTGAAKA VGKVLPSLNG KLTGMSFRVP TVDVSVVDLT VRLEKAATYD EIKKAIKEES EGKMKGILGY TEDDVVSTDF VGDNRSSIFD
301: AKAGIALSDK FVKLVSWYDN EWGYSSRVVD LIVHMSKA

Arabidopsis Description

GAPC2Glyceraldehyde-3-phosphate dehydrogenase GAPC2, cytosolic [Source:UniProtKB/Swiss-Prot;Acc:Q9FX54]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.