Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d015885_P001 | Maize | mitochondrion | 51.82 | 46.71 |
| Zm00001d021798_P001 | Maize | cytosol | 58.39 | 30.77 |
| Zm00001d051001_P002 | Maize | cytosol | 27.01 | 10.98 |
| Zm00001d049641_P001 | Maize | plasma membrane, plastid | 27.01 | 10.98 |
| Zm00001d035156_P003 | Maize | cytosol | 27.74 | 10.89 |
| Zm00001d015383_P001 | Maize | plastid | 31.39 | 10.26 |
| PGSC0003DMT400029242 | Potato | plastid | 29.93 | 9.79 |
| Solyc10g005510.2.1 | Tomato | plastid | 29.2 | 9.55 |
| Zm00001d053798_P004 | Maize | plastid | 26.28 | 8.67 |
| Zm00001d017121_P001 | Maize | plastid | 27.01 | 7.25 |
| Zm00001d025607_P001 | Maize | cytosol, plastid | 18.25 | 6.72 |
| Zm00001d003429_P001 | Maize | plastid | 19.71 | 6.7 |
| Zm00001d027488_P001 | Maize | extracellular, plastid | 21.17 | 6.46 |
| Zm00001d025593_P001 | Maize | plastid | 18.98 | 6.45 |
| Zm00001d025599_P001 | Maize | plastid | 18.25 | 6.2 |
| Zm00001d025601_P001 | Maize | plastid | 7.3 | 5.85 |
| Zm00001d019945_P001 | Maize | plastid | 2.92 | 3.6 |
Protein Annotations
| EnsemblPlants:Zm00001d016297_P001 | EnsemblPlants:Zm00001d016297_T001 | EnsemblPlantsGene:Zm00001d016297 | Gene3D:3.30.360.10 | Gene3D:3.40.50.720 | InterPro:NAD(P)-bd_dom_sf |
| PANTHER:PTHR23336 | PANTHER:PTHR23336:SF46 | ProteinID:AQK70436.1 | SUPFAM:SSF51735 | UniParc:UPI0008435A1B | UniProt:A0A1D6H6M0 |
| MapMan:12.5.1.2 | : | : | : | : | : |
Description
Glyceraldehyde-3-phosphate dehydrogenase GAPC1 cytosolic
Coordinates
chr5:+:156098860..156102593
Molecular Weight (calculated)
15543.6 Da
IEP (calculated)
4.755
GRAVY (calculated)
-0.161
Length
137 amino acids
Sequence
(BLAST)
(BLAST)
001: MFVVGVNENN YDPKMNDVSN ANCTTNCLAP LAKPFWKVLQ EGFSRGRSVV GVFEVNFIEP SHDKQEFERN PLFIRIETRL RQIIIDFCRV QVPLGGLDEC
101: AQEHLQKPEL VIMLAELSSG FWEAVQSREG AFLAPTN
101: AQEHLQKPEL VIMLAELSSG FWEAVQSREG AFLAPTN
001: MAKNYTVADV VNIDSDSDSD DDNGGVIGMV PSLASLIENQ KVSIADAATV APRETLECRS FWKAGENFVI PSSVTLTAIG MVEHARVHPK FLHSNATSHK
101: WAFGAIAELL DNAVDEIQNG ATVVKIDKIN IVKDNTPALV FQDNGGGMDP NGIRKCMSLG YSSKKSNTTI GQYGNGFKTS TMRLGADAMV FSRSTRGGKS
201: TQSIGLLSYT FLRKTGQDDV IVPMIDFDIS SDSPQPIIYG SPGDWSTNLN ILLKWSPFST MVELLQQFED IGTHGTKVII YNLWLNDEGI YELSFDDDDV
301: DIRLRDENAQ DGKRLHAKTL EVRSHISYRY RHSLRAYISM LYLKKFKNFK IILRGVSVAQ FNIADEFRHP ETIMYKPQAA AVDYAATGIK VGFIKEAPKL
401: PICGFNVYHK NRLIRPFWKV VLEGSTRGNG VMGVLEANFI EPAHDKQDFE RSSLFLRLEA RLKRITSDYW QNHCHIFGYQ TAQIPADKSK RTVIPDQPPT
501: VNTYNPSPLP SDRISHGGPI IREINLSNAT SSRTAAVAAP HLRNYTGLRN NFQPVQLNPQ PPAAGDTGNN LVGKLAAEIR EENLQLFMRC EEYVKKENEV
601: EQTVKSLEKE LEEIKSKCAQ LALLVDAKKK EMQQV
101: WAFGAIAELL DNAVDEIQNG ATVVKIDKIN IVKDNTPALV FQDNGGGMDP NGIRKCMSLG YSSKKSNTTI GQYGNGFKTS TMRLGADAMV FSRSTRGGKS
201: TQSIGLLSYT FLRKTGQDDV IVPMIDFDIS SDSPQPIIYG SPGDWSTNLN ILLKWSPFST MVELLQQFED IGTHGTKVII YNLWLNDEGI YELSFDDDDV
301: DIRLRDENAQ DGKRLHAKTL EVRSHISYRY RHSLRAYISM LYLKKFKNFK IILRGVSVAQ FNIADEFRHP ETIMYKPQAA AVDYAATGIK VGFIKEAPKL
401: PICGFNVYHK NRLIRPFWKV VLEGSTRGNG VMGVLEANFI EPAHDKQDFE RSSLFLRLEA RLKRITSDYW QNHCHIFGYQ TAQIPADKSK RTVIPDQPPT
501: VNTYNPSPLP SDRISHGGPI IREINLSNAT SSRTAAVAAP HLRNYTGLRN NFQPVQLNPQ PPAAGDTGNN LVGKLAAEIR EENLQLFMRC EEYVKKENEV
601: EQTVKSLEKE LEEIKSKCAQ LALLVDAKKK EMQQV
Arabidopsis Description
MORC1Protein MICRORCHIDIA 1 [Source:UniProtKB/Swiss-Prot;Acc:Q84WV6]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.