Factsheet for Zm00001d021798_P001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2
mitochondrion 1
cytoskeleton 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytoskeleton
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d016297_P001	Maize	cytosol	30.77	58.39
Zm00001d015885_P001	Maize	mitochondrion	21.92	37.5
Zm00001d049641_P001	Maize	plasma membrane, plastid	31.54	24.33
Zm00001d051001_P002	Maize	cytosol	31.15	24.04
Zm00001d035156_P003	Maize	cytosol	31.92	23.78
Zm00001d015383_P001	Maize	plastid	34.23	21.24
Zm00001d053798_P004	Maize	plastid	32.69	20.48
Solyc10g005510.2.1	Tomato	plastid	30.77	19.09
PGSC0003DMT400029242	Potato	plastid	30.77	19.09
Zm00001d017121_P001	Maize	plastid	31.15	15.88
Zm00001d025601_P001	Maize	plastid	10.0	15.2
Zm00001d003429_P001	Maize	plastid	21.15	13.65
Zm00001d025607_P001	Maize	cytosol, plastid	18.85	13.17
Zm00001d025593_P001	Maize	plastid	19.23	12.41
Zm00001d025599_P001	Maize	plastid	18.85	12.16
Zm00001d027488_P001	Maize	extracellular, plastid	20.77	12.03
Zm00001d019945_P001	Maize	plastid	1.15	2.7

Protein Annotations

EnsemblPlants:Zm00001d021798_P001	EnsemblPlants:Zm00001d021798_T001	EnsemblPlantsGene:Zm00001d021798	Gene3D:3.30.360.10	Gene3D:3.40.50.720	GO:GO:0003674
GO:GO:0003824	GO:GO:0008150	GO:GO:0008152	GO:GO:0016620	GO:GO:0055114	InterPro:GlycerAld/Erythrose_P_DH
InterPro:GlycerAld_3-P_DH_NAD(P)-bd	InterPro:NAD(P)-bd_dom_sf	PANTHER:PTHR10836	PANTHER:PTHR10836:SF46	PRINTS:PR00078	ProteinID:ONM58489.1
SMART:SM00846	SUPFAM:SSF51735	UniParc:UPI0008438C91	UniProt:A0A1D6IFQ8	MapMan:12.5.1.2	:

Description

Glyceraldehyde-3-phosphate dehydrogenase GAPC1 cytosolic

Coordinates

chr7:-:163126120..163129265

Molecular Weight (calculated)

29972.9 Da

IEP (calculated)

8.826

GRAVY (calculated)

-0.335

Length

260 amino acids

Sequence
(BLAST)

001: MNSKDILTHK FYEHISIHFG AEYVVESSDV FTMTDKALTH LKSGATKVVT YADAPMFVVG VNENIYDPKM NVVSNANCTT NCLAPLAKAY KEKQSKKLQG
101: REAYKEKQSK KLQGREQDVS WIVFYQAYKE KQSKELQGRE VRLDFAKGRT TQTPRSGSRD SNIISFFVAT EFLLFPFLQP FWKVLQEGSS RGRSVVGEFH
201: MFSIATIVIH VISSCDDKCQ NLGVLEVNFI EPAHYKQDFE RNPLFIWIET RLRQIIIDFW

Best Arabidopsis Sequence Match ( AT1G79530.1 )
(BLAST)

001: MAFSSLLRSA ASYTVAAPRP DFFSSPASDH SKVLSSLGFS RNLKPSRFSS GISSSLQNGN ARSVQPIKAT ATEVPSAVRR SSSSGKTKVG INGFGRIGRL
101: VLRIATSRDD IEVVAVNDPF IDAKYMAYML KYDSTHGNFK GSINVIDDST LEINGKKVNV VSKRDPSEIP WADLGADYVV ESSGVFTTLS KAASHLKGGA
201: KKVIISAPSA DAPMFVVGVN EHTYQPNMDI VSNASCTTNC LAPLAKVVHE EFGILEGLMT TVHATTATQK TVDGPSMKDW RGGRGASQNI IPSSTGAAKA
301: VGKVLPELNG KLTGMAFRVP TSNVSVVDLT CRLEKGASYE DVKAAIKHAS EGPLKGILGY TDEDVVSNDF VGDSRSSIFD ANAGIGLSKS FVKLVSWYDN
401: EWGYSNRVLD LIEHMALVAA SH

Arabidopsis Description

GAPCP1Glyceraldehyde-3-phosphate dehydrogenase GAPCP1, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9SAJ6]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.