Factsheet for Zm00001d015383_P001

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 5
mitochondrion 2
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EES04595	Sorghum	plastid	94.27	95.64
Os02t0171100-01	Rice	extracellular, plastid	90.93	92.7
TraesCS6D01G146900.1	Wheat	plastid	90.93	91.59
TraesCS6A01G157500.1	Wheat	plastid	90.45	91.11
TraesCS6B01G185400.1	Wheat	plastid	89.74	90.38
HORVU6Hr1G032070.2	Barley	plastid	88.78	89.42
Zm00001d053798_P004	Maize	plastid	86.16	86.99
CDX79324	Canola	plastid	77.8	77.43
Bra008416.1-P	Field mustard	plastid	76.61	77.35
CDX67990	Canola	plastid	77.57	77.2
CDY25342	Canola	plastid	76.37	77.11
AT1G16300.1	Thale cress	plastid	76.61	76.43
CDY22281	Canola	plastid	76.37	76.37
KRH66238	Soybean	plastid	75.89	76.08
AT1G79530.1	Thale cress	plastid	76.61	76.07
Bra026068.1-P	Field mustard	plastid	76.85	75.94
Bra003606.1-P	Field mustard	plastid	77.33	75.88
KRH07324	Soybean	extracellular, nucleus	75.66	75.84
CDY33343	Canola	plastid	77.09	75.82
CDY35080	Canola	plastid	76.85	75.59
Zm00001d049641_P001	Maize	plasma membrane, plastid	59.67	74.18
Zm00001d051001_P002	Maize	cytosol	58.71	73.0
Zm00001d035156_P003	Maize	cytosol	59.43	71.35
Zm00001d019945_P001	Maize	plastid	15.27	57.66
Zm00001d017121_P001	Maize	plastid	58.71	48.24
Zm00001d003429_P001	Maize	plastid	39.86	41.44
Zm00001d027488_P001	Maize	extracellular, plastid	43.44	40.53
Zm00001d025607_P001	Maize	cytosol, plastid	35.32	39.78
Zm00001d025593_P001	Maize	plastid	36.75	38.21
Zm00001d025599_P001	Maize	plastid	36.75	38.21
Zm00001d025601_P001	Maize	plastid	15.04	36.84
Zm00001d015885_P001	Maize	mitochondrion	13.13	36.18
Zm00001d021798_P001	Maize	cytosol	21.24	34.23
Zm00001d016297_P001	Maize	cytosol	10.26	31.39

Protein Annotations

KEGG:00010+1.2.1.12	KEGG:00710+1.2.1.12	EntrezGene:100282981	MapMan:3.12.4	Gene3D:3.30.360.10	Gene3D:3.40.50.720
UniProt:A0A1D6H1J5	ProteinID:AQK68755.1	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488
GO:GO:0005975	GO:GO:0006006	GO:GO:0008150	GO:GO:0008152	GO:GO:0016491	GO:GO:0016620
GO:GO:0050661	GO:GO:0051287	GO:GO:0055114	InterPro:GlycerAld/Erythrose_P_DH	InterPro:GlycerAld_3-P_DH_AS	InterPro:GlycerAld_3-P_DH_NAD(P)-bd
InterPro:GlycerAld_3-P_DH_cat	InterPro:Glyceraldehyde-3-P_DH_1	InterPro:NAD(P)-bd_dom_sf	PFAM:PF00044	PFAM:PF02800	PRINTS:PR00078
ScanProsite:PS00071	PANTHER:PTHR10836	PANTHER:PTHR10836:SF46	SMART:SM00846	SUPFAM:SSF51735	SUPFAM:SSF55347
TIGRFAMs:TIGR01534	UniParc:UPI000842C97D	EnsemblPlantsGene:Zm00001d015383	EnsemblPlants:Zm00001d015383_P001	EnsemblPlants:Zm00001d015383_T001	SEG:seg

Description

Glyceraldehyde-3-phosphate dehydrogenase%2C cytosolic

Coordinates

chr5:+:87517860..87522764

Molecular Weight (calculated)

44405.2 Da

IEP (calculated)

9.220

GRAVY (calculated)

-0.007

Length

419 amino acids

Sequence
(BLAST)

001: MAALSAPLRA VAAGSRVAAS DPVKVSCVRS TGSAHFGCAF PYIRASSSAA RNLEPLRAIA TQAPPAMPQY SSGEKTKIGI NGFGRIGRLV LRIATSRDDI
101: EVVAVNDPFI DAKYMVRKLI LILAYMFKYD STHGPFKGSI RVVDDSTLEI NGKKVTITSK RDPAEIPWGN FGAEYVVESS GVFTTTDKAS AHLKGGAKKV
201: VISAPSADAP MFVVGVNENS YDPKMNVVSN ASCTTNCLAP LAKVVHEEFG IVEGLMTTVH ATTATQKTVD GPSMKDWRGG RGAAQNIIPS STGAAKAVGK
301: VLPELNGKLT GMAFRVPTPN VSVVDLTCRI EKSASYDDVK AAIKTASEGA LKGILGYTDE DVVSNDFVGD SRSSIFDAKA GIGLSSSFMK LVSWYDNEWG
401: YSNRVLDLIA HMALVSAKH

Best Arabidopsis Sequence Match ( AT1G79530.1 )
(BLAST)

001: MAFSSLLRSA ASYTVAAPRP DFFSSPASDH SKVLSSLGFS RNLKPSRFSS GISSSLQNGN ARSVQPIKAT ATEVPSAVRR SSSSGKTKVG INGFGRIGRL
101: VLRIATSRDD IEVVAVNDPF IDAKYMAYML KYDSTHGNFK GSINVIDDST LEINGKKVNV VSKRDPSEIP WADLGADYVV ESSGVFTTLS KAASHLKGGA
201: KKVIISAPSA DAPMFVVGVN EHTYQPNMDI VSNASCTTNC LAPLAKVVHE EFGILEGLMT TVHATTATQK TVDGPSMKDW RGGRGASQNI IPSSTGAAKA
301: VGKVLPELNG KLTGMAFRVP TSNVSVVDLT CRLEKGASYE DVKAAIKHAS EGPLKGILGY TDEDVVSNDF VGDSRSSIFD ANAGIGLSKS FVKLVSWYDN
401: EWGYSNRVLD LIEHMALVAA SH

Arabidopsis Description

GAPCP1Glyceraldehyde-3-phosphate dehydrogenase GAPCP1, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9SAJ6]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.