Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 5
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d025607_P001 | Maize | cytosol, plastid | 53.8 | 24.73 |
| Zm00001d025593_P001 | Maize | plastid | 54.97 | 23.33 |
| Zm00001d025599_P001 | Maize | plastid | 54.97 | 23.33 |
| Zm00001d003429_P001 | Maize | plastid | 51.46 | 21.84 |
| Zm00001d027488_P001 | Maize | extracellular, plastid | 50.29 | 19.15 |
| Zm00001d049641_P001 | Maize | plasma membrane, plastid | 36.26 | 18.4 |
| Zm00001d035156_P003 | Maize | cytosol | 36.26 | 17.77 |
| Zm00001d051001_P002 | Maize | cytosol | 33.92 | 17.21 |
| Zm00001d015383_P001 | Maize | plastid | 36.84 | 15.04 |
| Zm00001d053798_P004 | Maize | plastid | 35.09 | 14.46 |
| Zm00001d017121_P001 | Maize | plastid | 33.92 | 11.37 |
| Zm00001d015885_P001 | Maize | mitochondrion | 9.36 | 10.53 |
| Zm00001d021798_P001 | Maize | cytosol | 15.2 | 10.0 |
| Zm00001d016297_P001 | Maize | cytosol | 5.85 | 7.3 |
| Zm00001d019945_P001 | Maize | plastid | 4.09 | 6.31 |
Protein Annotations
| EnsemblPlants:Zm00001d025601_P001 | EnsemblPlants:Zm00001d025601_T001 | EnsemblPlantsGene:Zm00001d025601 | Gene3D:3.30.360.10 | GO:GO:0003674 | GO:GO:0003824 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0016620 | GO:GO:0055114 | InterPro:GlycerAld_3-P_DH_cat | PANTHER:PTHR43148 |
| PANTHER:PTHR43148:SF5 | PFAM:PF02800 | ProteinID:AQK44070.1 | SEG:seg | SUPFAM:SSF55347 | UniParc:UPI000843178F |
| UniProt:A0A1D6J822 | MapMan:35.1 | : | : | : | : |
Description
Glyceraldehyde-3-phosphate dehydrogenase GAPA1 chloroplastic
Coordinates
chr10:+:123609332..123609999
Molecular Weight (calculated)
18682.4 Da
IEP (calculated)
12.126
GRAVY (calculated)
-0.504
Length
171 amino acids
Sequence
(BLAST)
(BLAST)
001: MSSPSATTPL RGRQGHQGVS DRNPSNLPWG ELSVDLFIEA PASCDHEAGK HIQRALRRCS SRRPTRATSP YVVGVMPTST TRTAHHQQRL LHDQLPVPFV
101: KRLLDASHRD RARARAAALN IVPTSTSAAK AVALVLPNLK GKLNGIVWVP TPNVSVLDPS CRSQGRRSPR R
101: KRLLDASHRD RARARAAALN IVPTSTSAAK AVALVLPNLK GKLNGIVWVP TPNVSVLDPS CRSQGRRSPR R
001: MASATFSVAK PSLQGFSEFS GLRNSSALPF AKRSSSDEFV SFVSFQTSAM RSNGGYRKGV TEAKIKVAIN GFGRIGRNFL RCWHGRKDSP LDVVVINDTG
101: GVKQASHLLK YDSTLGIFDA DVKPSGDSAL SVDGKIIKIV SDRNPSNLPW GELGIDLVIE GTGVFVDRDG AGKHLQAGAK KVLITAPGKG DIPTYVVGVN
201: AELYSHEDTI ISNASCTTNC LAPFVKVLDQ KFGIIKGTMT TTHSYTGDQR LLDASHRDLR RARAAALNIV PTSTGAAKAV ALVLPNLKGK LNGIALRVPT
301: PNVSVVDLVV QVSKKTFAEE VNAAFRDAAE KELKGILDVC DEPLVSVDFR CSDVSSTIDS SLTMVMGDDM VKVIAWYDNE WGYSQRVVDL ADIVANNWK
101: GVKQASHLLK YDSTLGIFDA DVKPSGDSAL SVDGKIIKIV SDRNPSNLPW GELGIDLVIE GTGVFVDRDG AGKHLQAGAK KVLITAPGKG DIPTYVVGVN
201: AELYSHEDTI ISNASCTTNC LAPFVKVLDQ KFGIIKGTMT TTHSYTGDQR LLDASHRDLR RARAAALNIV PTSTGAAKAV ALVLPNLKGK LNGIALRVPT
301: PNVSVVDLVV QVSKKTFAEE VNAAFRDAAE KELKGILDVC DEPLVSVDFR CSDVSSTIDS SLTMVMGDDM VKVIAWYDNE WGYSQRVVDL ADIVANNWK
Arabidopsis Description
GAPA-2glyceraldehyde 3-phosphate dehydrogenase A subunit 2 [Source:TAIR;Acc:AT1G12900]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.