Factsheet for Zm00001d019945_P001

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 6
cytosol 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr2P02630_001	Banana	endoplasmic reticulum, extracellular	44.14	36.84
GSMUA_Achr5P00230_001	Banana	plastid	43.24	21.82
Zm00001d015383_P001	Maize	plastid	57.66	15.27
Zm00001d053798_P004	Maize	plastid	50.45	13.49
VIT_19s0085g00600.t01	Wine grape	plastid	45.05	11.65
Zm00001d051001_P002	Maize	cytosol	33.33	10.98
Zm00001d049641_P001	Maize	plasma membrane, plastid	32.43	10.68
Zm00001d035156_P003	Maize	cytosol	32.43	10.32
Zm00001d017121_P001	Maize	plastid	33.33	7.25
Zm00001d015885_P001	Maize	mitochondrion	9.91	7.24
Zm00001d003429_P001	Maize	plastid	25.23	6.95
Zm00001d025607_P001	Maize	cytosol, plastid	22.52	6.72
Zm00001d025599_P001	Maize	plastid	24.32	6.7
Zm00001d027488_P001	Maize	extracellular, plastid	25.23	6.24
Zm00001d025593_P001	Maize	plastid	22.52	6.2
Zm00001d025601_P001	Maize	plastid	6.31	4.09
Zm00001d016297_P001	Maize	cytosol	3.6	2.92
GSMUA_Achr5P00240_001	Banana	cytosol	4.5	2.39
Zm00001d021798_P001	Maize	cytosol	2.7	1.15

Protein Annotations

EnsemblPlants:Zm00001d019945_P001	EnsemblPlants:Zm00001d019945_T001	EnsemblPlantsGene:Zm00001d019945	Gene3D:3.40.50.720	GO:GO:0003674	GO:GO:0003824
GO:GO:0008150	GO:GO:0008152	GO:GO:0016620	GO:GO:0055114	InterPro:GlycerAld/Erythrose_P_DH	InterPro:GlycerAld_3-P_DH_NAD(P)-bd
InterPro:NAD(P)-bd_dom_sf	PANTHER:PTHR10836	PANTHER:PTHR10836:SF46	PFAM:PF00044	ProteinID:ONM53962.1	SEG:seg
SMART:SM00846	SUPFAM:SSF51735	UniParc:UPI0008446FB9	UniProt:A0A1D6I150	MapMan:35.1	:

Description

Glyceraldehyde-3-phosphate dehydrogenase GAPCP1 chloroplastic

Coordinates

chr7:-:78504047..78505887

Molecular Weight (calculated)

12622.6 Da

IEP (calculated)

11.898

GRAVY (calculated)

-0.115

Length

111 amino acids

Sequence
(BLAST)

001: MEALSAPLRA IAAGSRVAAS DPVKGWRRIP RRRIPRRRVR PRQEYSSGEK TKIDINGFGR IGRLVLRIAT SRDDIEVVAV NDPFIDAKYM VRKLILILVI
101: IFHMSDSGHF I

Best Arabidopsis Sequence Match ( AT1G79530.1 )
(BLAST)

001: MAFSSLLRSA ASYTVAAPRP DFFSSPASDH SKVLSSLGFS RNLKPSRFSS GISSSLQNGN ARSVQPIKAT ATEVPSAVRR SSSSGKTKVG INGFGRIGRL
101: VLRIATSRDD IEVVAVNDPF IDAKYMAYML KYDSTHGNFK GSINVIDDST LEINGKKVNV VSKRDPSEIP WADLGADYVV ESSGVFTTLS KAASHLKGGA
201: KKVIISAPSA DAPMFVVGVN EHTYQPNMDI VSNASCTTNC LAPLAKVVHE EFGILEGLMT TVHATTATQK TVDGPSMKDW RGGRGASQNI IPSSTGAAKA
301: VGKVLPELNG KLTGMAFRVP TSNVSVVDLT CRLEKGASYE DVKAAIKHAS EGPLKGILGY TDEDVVSNDF VGDSRSSIFD ANAGIGLSKS FVKLVSWYDN
401: EWGYSNRVLD LIEHMALVAA SH

Arabidopsis Description

GAPCP1Glyceraldehyde-3-phosphate dehydrogenase GAPCP1, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9SAJ6]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.